CCCATTTCTCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCACCTGTACGAATACCGAATGGCAGAGAAGCACCTGA
AAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACC
CTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGG
TGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATT
GTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGG
TTCCTCAGAAAATTGGACATAGTACTACTGGAGGATCCAGCAATACCTCT
CCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCT
CCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAA
CCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTA
CACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCC
TAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAT
TCACAAAGAAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCC
CCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACACATGAA
ACTCACGAAGAATGAAGACTGAAGTGGGGACACTATGCCCCTTCTTAG

TTCCTCCATCCTTTGTGTATGTCTGGTGGCCGTCTGTTTCTTCGAXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAGGAGATTTTTAGTTTTT
TAATAAAGATACCTTTTTTTTTTTGGTGCTTTCTTTTATGTAATAGATTT
TCTTTAGTTTTCCACCTTAGTCTAAAAATACTCCGGGTTTGGTTATTCTC
CCCCCTCCCCCCAGGTCTTAACAAAATTGTATAATTTAAAAACATATCTT
GACTAAGACTGCATTGCATGGTGCCTTTCAGAGAGTCCAAGTAACTTGTC
TATGCTCACAGTTGAATGGTGGAAAATATTTCTTCCAAAACCAAGTTGGG
GTCATTACAAACTATTTATTCTTTCTGGTTCATATTATAATATTGGTGGT
ATGAACCTTCCAAACCCTCCACAGCTTACTGTGTATGATTATAGCATTTG
GCTCTCTTCACTAACTTTACTAGGCTTCTCTCTTCACCAATATGATTTGA
CTTGCTTAGGAGATTCATGCTTCTAAACGTTAAAAAACAAACAAACTAAC
AAAAAAACCAGATATTACAGGAGAGTTTCAAATGACCAATTGTAATTTAT
AGTTCTTCTCTTTATGTACTAACCCCCCTTACTTCCTATGTTCACCAATT
CAAAATCAGTATATTTTGATTTTTAGCTAATCCCAGGTAAGCCCATATAC
GGAGGCAGTTGCTGTGTATCTCAGAGCTCACATTGCTTAAGATTGTTCG

Query= MSMg01no531_p09.g1 MSMg01no531_p09.g1 CHROMAT_FILE:
MSMg01no531_p09.g1 PHD_FILE: MSMg01no531_p09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:45 2005
         (580 letters)



>mm_chr4_7970350_7971335
          Length = 986

 Score =  992 bits (513), Expect = 0.0
 Identities = 566/593 (95%), Gaps = 20/593 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaggagatttttagttttttaataaagatacc----tttttttttttggtgctttcttt 56
           ||||||||||||||| |||||||||||||||||    ||||||||||| |||||||||||
Sbjct: 786 caaggagatttttagctttttaataaagataccttttttttttttttttgtgctttcttt 727

                                                                       
Query: 57  tatgtaatagattttctttagttttccaccttagtctaaaaatactccgggtttggttat 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 726 tatgtaatagattttctttagttttccaccttagtctaaaaatactccgggtttggtta- 668

                                                                       
Query: 117 tctcccccctccccccaggtcttaacaaaattgtataatttaaaaacatatcttgactaa 176
             ||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 667 --tccccc--ccccccaggtcttgacaaatttgtataatttaaaaacatatcttgactaa 612

                                                                       
Query: 177 gactgcattgcatggtgcctttcagagagtccaagtaacttgtctatgctcacagttgaa 236
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 611 gactgcattgcatggtgcctttcaaagagtccaagtaacttgtctatgctcacagttgaa 552

                                                                       
Query: 237 tggtggaaaatatttcttccaaaaccaagttggggtcattacaaactatttattctttct 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tggtggaaaatatttcttccaaaaccaagttggggtcattacaaactatttattctttct 492

                                                                       
Query: 297 ggttcatattataatattggtggtatgaaccttccaaaccctccacagcttactgtgtat 356
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ggttcatattacaatattggtggtatgaaccttccaaaccctccacagcttactgtgtat 432

                                                                       
Query: 357 gattatagcatttggctctcttcactaactttactaggcttctctcttcaccaatatgat 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gattatagcatttggctctcttcactaactttactaggcttctctcttcaccaatatgat 372

                                                                       
Query: 417 ttgacttgcttaggagattcatgcttctaaacgttaaaaaac---aaacaaactaaca-- 471
           ||||||||||||||||||||||||||||||||||||||||||   |||||||  ||||  
Sbjct: 371 ttgacttgcttaggagattcatgcttctaaacgttaaaaaacaaaaaacaaa--aacaaa 314

                                                                       
Query: 472 ----aaaaaaccagatattacaggagagtttcaaatgaccaattgtaatttatagttctt 527
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aactaaaaaaacagatattacaggagagtttcaaatgaccaattgtaatttatagttctt 254

                                                                
Query: 528 ctctttatgtactaaccccccttacttcctatgttcaccaattcaaaatcagt 580
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ctctttatgtactaaccccccttacttcctatgttcaccaattcaaaatcagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 986
Length adjustment: 10
Effective length of query: 570
Effective length of database: 976
Effective search space:   556320
Effective search space used:   556320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)