NNNAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCAACTGAATATACAGAATGGCTGAGAAGCACTTTAAGA
AATGTTCAACATCTTTACTCATCAGGGAAATTCAAATGAACACTACCCTG
AGATTTCCAGCTCACACCTGTCAGAATGACTAAGATCAAAAACTCAGGTG
ACAGCAGATGCTGGCTAGGATGTAGAGAAAGGGGATCACACCTCCATTGC
TGGTGGTATTGCAAGCTGGTACTACGAATCTGAGAATTAGTCTGGCAGTT
CCTCAGAAAACTGGAAGTAGATCTACATGAGGACCCAGCTATACCACTTT
TGTACACAAAAGATGTTCCAACATATAACAAGGACAATGTTCATAGCAGC
CTTGTTTGTAATATCCAGAAACTGGAAAGAACCCAGATGTCCTTCAAGAG
AGGAATGGATACAGAAAATGTGGTGCATTTATACAATGGAGTACTACTCA
GCTATTAAAAACAATGATTTCATGAAATTTGCAGGCAATGGGTGGAACTT
GAAAATATCATCCTGAGTGAGGTAACCCAGTCACAAAAGAGCACACATGG
TTTGTTCTCACTGAAAAGTTGATATTAGGAAAAAAAAACTCAGAATACCC
CCCAATACAACTCACAGACCATATGAAACTCAGTAAGAAAGAAGATCACA
CCGAAGTCTGGATGGTGGAGTACTACTCATTAGGGGGAAGAGACTAATCT
GTGGGAG

NTTGTTCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGTTCCCCAATTCTTTCGT
TTGGATGTAGGTTATGAAAGAGAACATATATTATTTGAATTCTGGACTTG
GGTATCCTTAAGTTCTTAGAGAATTTTAATTACTTTAGTGTTTTTTTGAC
ATTACAATATAAAACATGATATTACTATGTCTGAAAAGTTTCATCTAAAG
CGATTGTTTTTAAGTGTTAAATAAAATGTTAATATGTCAATAAAAATTAT
GTGTTTACAAACAATATAACATATATGTATCTCATAACTAATATTAGGTA
AAAATGAGAAAACAGTAACTTTACATGGATATGTTCTGGTAACATTAAGT
AATAATATTTGTGTTTGCTATAACCCATCAAATATTGAAAATATTAATCT
TTTATTTTGAAATATTAAAAATATTGAAAATATTAGTCTTTACTTTGCCT
ATGAAATCTGTAGAAAGCATATAATATGCCCCACATTTTTTATCACTCAG
TTAAAAGCAATCTTAAAATTGATAAGAGTGTTTTATATCAGTGAGTTTAA
TGAAATGAGTTGCCAATGCTGTGTAGAAGATTCAGAGATTTACTTTAAGG
TTAAATGAAGAAAACTCAGCTAAGGAATATCTAAAGGCTGGTAAGAAAAC
TTGTTCCTGGAGGTCATACCTTTGCAGCTGCCGTGATCACATGACAGTGC
ACTGCAAACGG

Query= MSMg01no532_c24.g1 MSMg01no532_c24.g1 CHROMAT_FILE:
MSMg01no532_c24.g1 PHD_FILE: MSMg01no532_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:03 2005
         (550 letters)



>mm_chr4_79060686_79061635
          Length = 950

 Score = 1017 bits (526), Expect = 0.0
 Identities = 544/550 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcgttccccaattctttcgtttggatgtaggttatgaaagagaacatatattatttga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 tttcgttccccaattctttcgtttggatgtaggttatgaaagagaacatatattatttgg 260

                                                                       
Query: 61  attctggacttgggtatccttaagttcttagagaattttaattactttagtgtttttttg 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attctggacttgggtattcttaagttcttagagaattttaattactttagtgtttttttg 320

                                                                       
Query: 121 acattacaatataaaacatgatattactatgtctgaaaagtttcatctaaagcgattgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acattacaatataaaacatgatattactatgtctgaaaagtttcatctaaagcgattgtt 380

                                                                       
Query: 181 tttaagtgttaaataaaatgttaatatgtcaataaaaattatgtgtttacaaacaatata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tttaagtgttaaataaaatgttaatatgtcaataaaaattatgtgtttataaacaatata 440

                                                                       
Query: 241 acatatatgtatctcataactaatattaggtaaaaatgagaaaacagtaactttacatgg 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatatatgtatctcagaactaatattaggtaaaaatgagaaaacagtaactttacatgg 500

                                                                       
Query: 301 atatgttctggtaacattaagtaataatatttgtgtttgctataacccatcaaatattga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 atatgttctggtaacattaagtaataatatttgtgtttgctataacccatcaaatgttga 560

                                                                       
Query: 361 aaatattaatcttttattttgaaatattaaaaatattgaaaatattagtctttactttgc 420
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatattaatcttttattttgaagtattaaaaatattgaaaatattagtctttactttgc 620

                                                                       
Query: 421 ctatgaaatctgtagaaagcatataatatgccccacattttttatcactcagttaaaagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctatgaaatctgtagaaagcatataatatgccccacattttttatcactcagttaaaagc 680

                                                                       
Query: 481 aatcttaaaattgataagagtgttttatatcagtgagtttaatgaaatgagttgccaatg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatcttaaaattgataagagtgttttatatcagtgagtttaatgaaatgagttgccaatg 740

                     
Query: 541 ctgtgtagaa 550
           ||||||||||
Sbjct: 741 ctgtgtagaa 750


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space:   507600
Effective search space used:   507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)