TCCCCTTTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTCTGTTTATCTCTGTTCCCCATTTTTAAATAGGGAT
ATTTGATTCTCTGAAGTCTAATTTCTTGAGTTCTTTGTATATATTGGATA
TTAGGTCTCTATCAGATATAGGGTTGGTAAAGATCTTTTCCCAATCTGTT
GGTTGCCATTTTGTTCTATTGACAGTGTTCTTTGCCTTACAGAAGCTTTG
CAATTTTATGAGGTCCCAGTTGTCAATTCTTGATCTTAGAGCAAAAGTCA
TTGGTGTTCTGTTCAGGAAATTTTCCCGTTTGTCCATATATTTCAGGCTT
TTCCCCACTTCCTTTATTATTAGTTTCACTGTATCTGGTTTTATGTGGAG
GTCCTTGATCCACTTGGACTTGAGCTTTGTACAAGAAGATACAAATGGAT
CAATTTGCATTCTTCTATATTCTGACTGACAGTTGAACCAGTACCATTTG
TTGAAAATGCTGTCTTTTATCCACAGGATGGTTTTAGCTCCTTTGTCAAA
GATCAAATGACCATAGGTGTGTGGATTCTTTTATGGTTCTTCATTTCTAT
TCCATTGATCTTCCTGCCTGTCTCTGTACCAATACCATGCAGTTTTTAAA
TCACTATTGCTTTATAGTACAGCTTCAGGTCAGGGAACTGAAAAGGGAGC
CATAACAACCGAAACTAATGAAATTCAAAAAATCATCAGA

CATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGAGGTTCTAGCTAGTTCAAACAAC
TAATAAAGAAAATGAGAGGAAGAAAATTTGCGGCAATTTTGCAAAAGAGG
AGAAATAAAACTTTACTTTACAAATAGCCCTGGCTGTGCATCAAGCCAAG
CAAGCAGTACAGCCGGGGCGGATGGTAATGTGATTACGCTGGTAATGATA
TGCATTAGGTACATTATGGGAAACAATAATGCTCCCTACCAAACGCACTC
AATCTAGTTATTGATTTTTCTTAATGTTAAAAGCACTACTCTAAAACCGA
AAAGAGATATCCTTTATTTATTCCCTTTCTCTTTTAGTTTCCAAGTCCAT
AGATCCTTAGATGCAGAGCAGTATAGCAAGATAATGGAGTAATGTATATC
TAATCTGACACCTACTGGGCCGGGCTAATGTTTCAGATAGAAACAGTTAG
GAACTGCTTGGGGGCGAGGAGTCATATATAAACAAGAGAAGAAAATCCAA
CCTCAACGTTGCTTTCTTTTTGTTGTTTTGTTGTTGTTGTTGTTGTTGTT
TGGTATAATACATGATGCCAAGCTCGTGCATCTATGTTAACACTTTTTTC
TCCCGTGATGCATGTTCAATCTATTTAGGTTTTTAATACATTATTATTGT
AACAGAAAAAAGTAGTTCCCCCCCCCCCGCCCGGGCTCTTCTCCAATCTT
TTACATTGTAGAATCTCATTTTCAT

Query= MSMg01no533_b22.g1 MSMg01no533_b22.g1 CHROMAT_FILE:
MSMg01no533_b22.g1 PHD_FILE: MSMg01no533_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:15 2005
         (624 letters)



>mm_chr4_91789917_91790940
          Length = 1024

 Score = 1176 bits (608), Expect = 0.0
 Identities = 619/624 (99%), Gaps = 3/624 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaggttctagctagttcaaacaactaataaagaaaatgagaggaagaaaatttgcggca 60
           |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 694 agaggttctagctagttcaaacaactaataaagaaaatgagaggaatataatttgcggca 635

                                                                       
Query: 61  attttgcaaaagaggagaaataaaactttactttacaaatagccctggctgtgcatcaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 attttgcaaaagaggagaaataaaactttactttacaaatagccctggctgtgcatcaag 575

                                                                       
Query: 121 ccaagcaagcagtacagccggggcggatggtaatgtgattacgctggtaatgatatgcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ccaagcaagcagtacagccggggcggatggtaatgtgattacgctggtaatgatatgcat 515

                                                                       
Query: 181 taggtacattatgggaaacaataatgctccctaccaaacgcactcaatctagttattgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taggtacattatgggaaacaataatgctccctaccaaacgcactcaatctagttattgat 455

                                                                       
Query: 241 ttttcttaatgttaaaagcactactctaaaaccgaaaagagatatcctttatttattccc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttttcttaatgttaaaagcactactctaaaaccgaaaagagatatcctttatttattccc 395

                                                                       
Query: 301 tttctcttttagtttccaagtccatagatccttagatgcagagcagtatagcaagataat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttctcttttagtttccaagtccatagatccttagatgcagagcagtatagcaagataat 335

                                                                       
Query: 361 ggagtaatgtatatctaatctgacacctactgggccgggctaatgtttcagatagaaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ggagtaatgtatatctaatctgacacctactgggccgggctaatgtttcagatagaaaca 275

                                                                       
Query: 421 gttaggaactgcttgggggcgaggagtcatatataaacaagagaagaaaatccaacctca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gttaggaactgcttgggggcgaggagtcatatataaacaagagaagaaaatccaacctca 215

                                                                       
Query: 481 acgttgctttctttttgttgttttgttgttgttgttgttgttgtttggtataatacatga 540
           ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||
Sbjct: 214 acgttgctttctttttgttgtt---ttgttgttgttgttgttgtttggtataatacatga 158

                                                                       
Query: 541 tgccaagctcgtgcatctatgttaacacttttttctcccgtgatgcatgttcaatctatt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tgccaagctcgtgcatctatgttaacacttttttctcccgtgatgcatgttcaatctatt 98

                                   
Query: 601 taggtttttaatacattattattg 624
           ||||||||||||||||||||||||
Sbjct: 97  taggtttttaatacattattattg 74


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)