Query= MSMg01no533_k04.b1 MSMg01no533_k04.b1 CHROMAT_FILE:
MSMg01no533_k04.b1 PHD_FILE: MSMg01no533_k04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:53 2005
(456 letters)
>mm_chr4_97618745_97619600
Length = 856
Score = 837 bits (433), Expect = 0.0
Identities = 442/445 (99%)
Strand = Plus / Plus
Query: 4 ggaattctgctgctacatttagggaggggaggtggggacactgccatgtgcctgctctgc 63
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgttgctacatttagggaggggaggtggggacactgccatgtgcctgctctgc 263
Query: 64 tttaccccattcttggcagcagtcttaagacctgcaaggcattagtcagccattggagag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttaccccattcttggcagcagtcttaagacctgcaaggcattagtcagccattggagag 323
Query: 124 cacatgacttctctttcctttgtacctctgagtatgggaaatgttcctgccattgggcat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cacatgacttctctttcctttgtacctctgagtatgggaaatgttcctgccattgggcat 383
Query: 184 tgtatcctgtaaacagttcttaggtcttctgagtgctgaacagtgctctgtgctcacagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtatcctgtaaacagttcttaggtcttctgagtgctgaacagtgctctgtgctcacagg 443
Query: 244 tggtacttgctacaacctctttacatcatgcagagtttccagataaccccaagtcagagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 444 tggtacttgctacaacctctttacatcatgcagagtttccagataaccccacgtcagagg 503
Query: 304 ggtacgtctcgctttccttaccagcccccaacaaggggcttacacagcagagatggtggc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggtacgtctcgctttccttaccagcccccaacaaggggcttacacagcagagatggtggc 563
Query: 364 ctttccatcctttgttttctgaatcccactcctctttctctgtgactgtacacttttcat 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctttccatcctttgttttctgaatcccactcctctttctctgtgactgtacacttttcag 623
Query: 424 aggctcgctgttactggcagttgcc 448
|||||||||||||||||||||||||
Sbjct: 624 aggctcgctgttactggcagttgcc 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_k04.g1 MSMg01no533_k04.g1 CHROMAT_FILE:
MSMg01no533_k04.g1 PHD_FILE: MSMg01no533_k04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:53 2005
(635 letters)
>mm_chr4_97756597_97757632
Length = 1036
Score = 743 bits (384), Expect = 0.0
Identities = 396/400 (99%), Gaps = 1/400 (0%)
Strand = Plus / Minus
Query: 1 caaaggagcataggcaggatgtg-aaacaggtcattcccattccacagctaatagcattg 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 400 caaaggagcataggcaggatgtgaaaacaggtcattcccattccacagctaatagcattg 341
Query: 60 tgcctgttctactgtgaaatcagattagagtgtcaaagacatgtcccttatcccagaacc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgcctgttctactgtgaaatcagattagagtgtcaaagacatgtcccttatcccagaacc 281
Query: 120 tccactgacagaggcatttctcttccccgaaaactgtcatggaagtgtcgctaactcctg 179
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tccactgacagaggcattcctcttccccgaaaactgtcatggaagtgtcgctaactcctg 221
Query: 180 cctgctgtctgtagtcccacttttaaaatctgttggtcgtggatatggagttgtgagact 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 220 cctgctgtctgtagtcccacttttaaaatctgttggtcgtggatatggagttgtgaaact 161
Query: 240 gaacgttgggtttcaaaaatactggcaacagtaaacaggatgtttctagatatgcaatga 299
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 160 gaacgttgggtttcaaaaatactggaaacagtaaacaggatgtttctagatatgcaatga 101
Query: 300 caagaagttaattaaaagtcaagtgagtaatgagtccagggtgtttgggcagcactggcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 caagaagttaattaaaagtcaagtgagtaatgagtccagggtgtttgggcagcactggcc 41
Query: 360 catgctgccctgcaggacatctttgcaggcttgcacaggg 399
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 catgctgccctgcaggacatctttgcaggcttgcacaggg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1036
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1026
Effective search space: 641250
Effective search space used: 641250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
