Query= MSMg01no534_h18.b1 MSMg01no534_h18.b1 CHROMAT_FILE:
MSMg01no534_h18.b1 PHD_FILE: MSMg01no534_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:01 2005
(656 letters)
>mm_chr4_26829640_26830694
Length = 1055
Score = 594 bits (307), Expect = e-174
Identities = 340/351 (96%), Gaps = 2/351 (0%)
Strand = Plus / Plus
Query: 306 gaaatgtgggatgcttaccctctcttttgtttacatttgaaggggaaattcatttaaaag 365
||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 506 gaaatgtgggatgtttaccctctcttttgtttacacttgaaggggaaattcatttaaggg 565
Query: 366 aaaaatgcacttggagtcctacagtggacctagatagtatataatttcaggactcatggt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aaaaatgcacttggagtcctacagtggacctagatagtatataatttcaggactcatggt 625
Query: 426 ttcaaatgttttgaaataaatctgagaaatgttatcatgggtaaataacaaattttaagc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 626 ttcaaatgttttgaaataaatctgagaaatgttatcatgggtaaataacaaatttaaa-c 684
Query: 486 ttttcaatttttaaataaaataatttttccagtttctctttttaccagatcataataatt 545
|||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 685 ttttaaatttttaaataaaataatttt-ccagtttctctttttaccagatcacaataatt 743
Query: 546 aatttgtatgtaattgtccactcaaaaacatctgaataaaaataaaatttcatacaaccc 605
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 744 aatttgtatgtaattgtccactcaaaaacatctgaataaaaataaaattttatacaaccc 803
Query: 606 tcaaaggcagtaattaaacaaatgttaaccatatcagttggttttgcttca 656
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ccaaaggcagtaattaaacaaatgttaaccatatcagttggttttgcttca 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1055
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1045
Effective search space: 675070
Effective search space used: 675070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_h18.g1 MSMg01no534_h18.g1 CHROMAT_FILE:
MSMg01no534_h18.g1 PHD_FILE: MSMg01no534_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:01 2005
(520 letters)
>mm_chr4_26876591_26877510
Length = 920
Score = 876 bits (453), Expect = 0.0
Identities = 504/521 (96%), Gaps = 2/521 (0%)
Strand = Plus / Minus
Query: 1 tttgagtgctattaacattgaatgtgcatataagttgcttaaaacacaaaatataattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tttgagtgctattaacattgaatgtgcatataagttgcttaaaacacaaaatataattta 661
Query: 61 aaacatgcaaaaacattcacattttaaaaatcaatgcatttggaatcattaatataaatc 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aaacatgcaaaaacattcgcattttaaaaatcaatgcatttggaatcattaatataaatc 601
Query: 121 tttaatccaattagatattgttagtaagctgtgtgagggtttacaaacatcatgtacttc 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 600 tttaatccaattagatattgttagtaagctgtgtgaaggtttacaaacatcatgtacttc 541
Query: 181 aactactatcactctctgtattagtattaagctaaaagttaaaaagcaaccc-aattagt 239
|||||| |||||||||||||||||||||||||||||||| |||||||||||| || ||||
Sbjct: 540 aactaccatcactctctgtattagtattaagctaaaagtaaaaaagcaaccctaa-tagt 482
Query: 240 aatatacagaatgtgttattgtcacactgctataagaaaatcacaaacctgattatttca 299
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatatacagaacgtgttattgtcacactgctataagaaaatcacaaacctgattatttca 422
Query: 300 acaagggaatctgattctaaataaaattggaaaactaatttattcataacaaacatagat 359
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 421 acaagggaatctgattctaaataaaattggaaaattaatttattcataacaaacatagaa 362
Query: 360 accaaccagatcattgcctagtggaatgtaaccataaggttgaatagtaaattttaaaaa 419
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 361 accaaccagatcattgcctagtggaatgtcaccataagaatgaatagtaaattttaaaaa 302
Query: 420 taacttggctctattagtagaccgggaacattgggttgtaccaagctggctataagagaa 479
|||||||||||||||| |||||| |||||||||||||||| |||||| |||||| |||||
Sbjct: 301 taacttggctctattactagaccaggaacattgggttgtaacaagcttgctataggagaa 242
Query: 480 tgaagccattttaatacaaactttatagactgataaactcc 520
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaagccattttaatacaaactttatagactgataaactcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
