TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACATGAGATATACCGAATGGCAGAGAAGCACCTGAAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCGAGGATGTGGAGAAAGAGGAACACTTCTCCATTGTTGGTGGG
ATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTTGTGGTTCCTCAGA
AAACTGGACATAGTACTACCGGAGGATCCTGCAGTACCTCTCCTGGGCAT
ATATCCAGAAGATGTTTCAACTTGTAATAAGGACACATGCTCCACTATGT
TCATAGCAGCCTTATTTATAATAGCCAGAAGATGAAATGAACCCAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATGTGGTTCATTTTCACAAAGGA
GTACTACTCTGCTATTAAAAACAATGAATTTATGAAATTCCTGGGCAAAT
AGATGGACCTGGAGAGCATCATCCTGAGTGTGGTAACACAATCACAAAAG
AACTCACATGATATGTACTCACTGATAAGTGGATATTGGTCTAGAAAATT
ATAATATCCAAGATATAAGATACAATTTGCTAAACACATGAAACTCAAGA
AGAACCAAGTCCAACGTGTGGATACTTTGGCCCTTCTTTAAATTGGAAAC
AAAACACCCATGGAAGGAGTTACAGT

AATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATGCCCAAACTAATAAATTGCCCACA
TTATCCAGCATACATGTACTGTTCCATTTCTCTTGATACATAATCACTAT
AAATACAGGCTATTTACAATACAAAGCATAAGTTATATAGAAAACCATTA
ATTATTTATACCAGTATCATTTATATGAAAAATATTCTGTGCATTTGGAA
TGCACCAATCTATTTTTATATAGAGAAATGTCACTCATAAATCCTATTTG
TTTTGCTCTTCTTGATGAATCTTATATGCCCTGTACTCCCTAATTTAAAT
CAAATTCCAGTCTCAAGTTTTTTTCTTACATTATTTTGTTTACTATTCCG
GTGATATAGAGTGAAATAATTATTTTCTATATTGGCAAACATTACATATG
CAATGAAACAGCAAAGTAAAAGATAACCATCAACAATATTATTCTGTTTA
TTTATTGTTATTTTCTTTGGGAAGTTATGTGTATGTTAATTTTATGTAAA
ATTTTGTAGCACATAGGTGTTTGGAGTTTTAATGTTCTTAGATTTACAGA
TTAGCTAGAGAAAATACTTGTTATTACAAATGGCCAAGATTAATTATATA
CTCCTAATATGTGGTTCTCCTAGTTTTTATACAGTTATAATGACACAAAA
TGCTTTCTAAACATATTGGTAAATATATATATATATATGTGTGTGTGTGT
GTGTGTGTGTGTGTGGTGTNTGN

Query= MSMg01no535_d01.g1 MSMg01no535_d01.g1 CHROMAT_FILE:
MSMg01no535_d01.g1 PHD_FILE: MSMg01no535_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:56 2005
         (690 letters)



>mm_chr4_37471428_37472518
          Length = 1091

 Score = 1201 bits (621), Expect = 0.0
 Identities = 676/703 (96%), Gaps = 15/703 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcccaaactaataaattgcccacattatccagcatacatgtactgttccatttctctt 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 191 atgcccaaactaataaattgcccacattacccagcatacatgtactgttccatttctctt 250

                                                                       
Query: 61  gatacataatcactataaatacaggctatttacaatacaaagcataagttatatagaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gatacataatcactataaatacaggctatttacaatacaaagcataagttatatagaaaa 310

                                                                       
Query: 121 ccattaattatttataccagtatcatttatatgaaaaatattctgtgcatttggaatgca 180
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ccattacttatttataccagtatcatttatatgaaaaatattctgtgcatttggaatgca 370

                                                                       
Query: 181 ccaatctatttttatatagagaaatgtcactcataaatcctatttgttttgctcttcttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccaatctatttttatatagagaaatgtcactcataaatcctatttgttttgctcttcttg 430

                                                                       
Query: 241 atgaatcttatatgccctgtactccctaatttaaatcaaattccagtctcaagttttttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atgaatcttatatgccctgtactccctaatttaaatcaaattccagtctcaagttttttt 490

                                                                       
Query: 301 cttacattattttgtttactattccg-------------gtgatatagagtgaaataatt 347
           || ||||||||||||||||||||  |             |||||||||||||||||||||
Sbjct: 491 ctgacattattttgtttactatt--gtttactattactagtgatatagagtgaaataatt 548

                                                                       
Query: 348 attttctatattggcaaacattacatatgcaatgaaacagcaaagtaaaagataaccatc 407
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 549 attttctatattggcaaacattatatatgcaatgaaacagcaaagtaaaagataaccatc 608

                                                                       
Query: 408 aacaatattattctgtttatttattgttattttctttgggaagttatgtgtatgttaatt 467
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aacaatattattctgtttatttattgttattttctttgggaagttatgtgtatgttaatt 668

                                                                       
Query: 468 ttatgtaaaattttgtagcacataggtgtttggagttttaatgttcttagatttacagat 527
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ttatgtaaaattttgtagcacataggtgtttggagttttaatgttcttagatttacagat 728

                                                                       
Query: 528 tagctagagaaaatacttgttattacaaatggccaagattaattatatactcctaatatg 587
           ||||| |||||||| |||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 729 tagctggagaaaatccttgttattggaaatggccaagattaattatatactcctaatatg 788

                                                                       
Query: 588 tggttctcctagtttttatacagttataatgacacaaaatgctttctaaacatattggta 647
           |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 789 tggtcctcctagtttttatacagttataataacacaaaatgctttctaaacatattggta 848

                                                      
Query: 648 aatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgt 690
           ||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 849 aatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 891


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1091
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1081
Effective search space:   735080
Effective search space used:   735080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)