AACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCG
GAATTCAATTGGGTTGTCTGTGCATCTTTAAGCCTTCCTTTAATGAACAC
CAACTATATGCCAGGCATGTCATTGGCTACTTATGCCATCTCTCCTAACT
CTCTAGATACCAATCGCCCATTAACACCAACAACCATGTATTCTAGAGAA
CCAAAGAAAAGGGAGGTTAATGGGCTCCTTACTGGCCAAAGATTTGGACC
TATATCTGTGTGGGCCCAATAACCATCTTTTGCCACAACGTCCTGCTTGC
TTCCCAGGTTTAAGAGATAATTCTCACAATAGATGATCTGCCAGATGACT
ATAAAAAAAATGATGTATACTGATTGCACACCAGATATAGAAGTCTGCAA
GTTTACCAGGAAGGGTGATAACTAACCGTTTCCTGATAGGACCTATTATA
GACCGCCTCGGTATATAACTTGAAACAGCATTGCCAGAATTTCTTTATAG
ATGCTGGTGTTAACAGTTTCTGTTGAAACCAAACACTTTGTCTCTATTTC
CCTACAAAGCTTATATGCAGCACTGGTAGAGCCACAGTTCAAGTTGGGTC
TTAAATGTTGGCTAGCCCAGAATAAGAGTGCTGTTGAATCTTGACAGCAT
CTCATTAGTGTGAATTAGTGACTCAATATTAAAACTAGAAAACAAATGGT
TAAGAGACCCCAGCTAAAACAAGTTTCATTAAAATAATAATGACTTCATC
CACTCTTCAC

CAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTAGGCTTGATTAATGAGATAGGAGG
TTATGCTGGTTAGTTTTATGTCAATTTGATTCAAGCTACAGTTGTCTGAT
AGGAGAGAACCTCAGTTGAGAAAATGCCTCCCTAAGATCCTAAGATCCGG
CTAAGAAGCATTTTCTTAATTAGTGATTGAGGTGGGAGGGGTCAGCCCAT
TATAGGCGGGGCCGTCCCTGAGCTGGTCCTAGGTTCCCTAAGAAAGGCTG
AGCAAGCCATGATGAGAAAGCTAGTAAGTAGCACCCTCCATAGGTGCATC
AGCTCCTGTTTCTAGATTCTTGTCCTGTTTGAGTTCCTGCCCTGACTTCC
ATCAGTGATAGATTATTACCCTGAAGTATAATTTTTTTAAAGAGGTTTTA
GAATTTTACATAGACTTTGGATTTTAAAAGAGACTGAATATTTTAAGGGG
ACTAGAATTCAAGTGTTTGAATTTTTAAAGATTGTAAGACTTTTAAAACT
TAGAATGTTTATATTGTAATGTTGATATTTAAGTGTGATCCTGGGGATGA
ACAAGAAAGGAAAGGTTATGGGTTGTGGTGCTCTGTTTATGTGTGTTAGG
TTGGCAAGGGGTCAGTTGTGCTAGCTAGTCGACTTGACATAAGCGAGAGT
CATCTGAAAGGAGGGAACCTCAACTGAGAAAATTCTTCCATGAGTTCCAG
CCTTATGGCACCTTN

Query= MSMg01no535_g07.b1 MSMg01no535_g07.b1 CHROMAT_FILE:
MSMg01no535_g07.b1 PHD_FILE: MSMg01no535_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:12 2005
         (650 letters)



>mm_chr4_99848588_99849638
          Length = 1051

 Score = 1232 bits (637), Expect = 0.0
 Identities = 646/649 (99%), Gaps = 1/649 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   ggaattcaattgggttgtctgtgcatctttaagccttcctttaatgaacaccaactatat 62
           ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ggaattcaattgggtggtatgtgcatctttaagccttcctttaatgaacaccaactatat 792

                                                                       
Query: 63  gccaggcatgtcattggctacttatgccatctctcctaactctctagataccaatcgccc 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gccaggcatgtcattggctacttatgccatctctcctaactctctagataccaatcgccc 732

                                                                       
Query: 123 attaacaccaacaaccatgtattctagagaaccaaagaaaagggaggttaatgggctcct 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 attaacaccaacaaccatgtattctagagaaccaaagaaaagggaggttaatgggctcct 672

                                                                       
Query: 183 tactggccaaagatttggacctatatctgtgtgggcccaataaccatcttttgccacaac 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tactggccaaagatttggacctatatctgtgtgggcccaataaccatcttttgccacaac 612

                                                                       
Query: 243 gtcctgcttgcttcccaggtttaagagataattctcacaatagatgatctgccagatgac 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gtcctgcttgcttcccaggtttaagagataattctcacaatagatgatctgccagatgac 552

                                                                       
Query: 303 tat-aaaaaaaatgatgtatactgattgcacaccagatatagaagtctgcaagtttacca 361
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tataaaaaaaaatgatgtatactgattgcacaccagatatagaagtctgcaagtttacca 492

                                                                       
Query: 362 ggaagggtgataactaaccgtttcctgataggacctattatagaccgcctcggtatataa 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ggaagggtgataactaaccgtttcctgataggacctattatagaccgcctcggtatataa 432

                                                                       
Query: 422 cttgaaacagcattgccagaatttctttatagatgctggtgttaacagtttctgttgaaa 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cttgaaacagcattgccagaatttctttatagatgctggtgttaacagtttctgttgaaa 372

                                                                       
Query: 482 ccaaacactttgtctctatttccctacaaagcttatatgcagcactggtagagccacagt 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccaaacactttgtctctatttccctacaaagcttatatgcagcactggtagagccacagt 312

                                                                       
Query: 542 tcaagttgggtcttaaatgttggctagcccagaataagagtgctgttgaatcttgacagc 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tcaagttgggtcttaaatgttggctagcccagaataagagtgctgttgaatcttgacagc 252

                                                            
Query: 602 atctcattagtgtgaattagtgactcaatattaaaactagaaaacaaat 650
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atctcattagtgtgaattagtgactcaatattaaaactagaaaacaaat 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1051
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1041
Effective search space:   666240
Effective search space used:   666240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)