NNCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTGTTCATTTCTGAGCCCCATTTTTTAATGGGGTTGTTTG
ATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGT
CCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGG
TCTCTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTT
TCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCT
GTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCC
CACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTT
TGATCCATTTAGATTTGACCTTAGTACAAGGAGATAGGTATGGATCGATT
CGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAA
AATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCA
AGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCAT
TGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTACCACAAT
TGCTCTGTAGTAAAGCTTTAGGTCCGGCATGGTGATTCCACCAGAGGTTC
TTTTATCCTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTATTCCAG
ATGAATTTGN

NNCACGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACACAGAGGAGGTTTAGCTGT
TCCAGAGACTCTAGAGTGCAGTGACAGGACTGACCTGGAGGAGCTGAAAG
GACTTCCCCGAGGAAGCAAAATTAGGCCAGATCATAACACAAGAAACAAG
AAATAAAGGCCACTCCAGGCTGGGGGGAATCGTTATTTCAGCGATTACAG
ATAAAGTAGAGAGAAGTTAGCTCAGAGAAACACATAGTTGTATGGAGTCC
AGAGGAGAGAAACATCTCATTTCTCAAGAGGGATAAAAGAGGCACACAAG
GGAGGAAGTGGTATTTAAAATAGGCCGTGATATTTTATGAAAGGAGGGAA
GGGAGAGAGAGAGGGCTCTGCAGATGTAGTGTGCGTTATGGCCTCGAGGT
AAGAAAGTTCAAGAGGGATTTAGAGAGTGTGGAGGAGTCAAGTGTGCTTA
GCATGCAGGCTGGCTGCAGTTAGGCCCGGAAGGTCAGGTGGAGTCAGATG
ATGGAGAGCTCGGAATGTTGAGCACCCTGAACCAACTTTGTCCTTGGCCA
AAAGGCGCTGATATTTTGCTTTGGGGGATAAAGGTCCACTTAATTTAATT
CCACCAATATTTTCTGAGATCTCACTCTGAGTTAGGTACTCCAAATAGGT
TCTAGAGACACTGAAAGAACAAGGTATGTTGACTGCACTCTTGAATCTCC
TAGTAAAAACCCAAACGCCA

Query= MSMg01no535_h21.g1 MSMg01no535_h21.g1 CHROMAT_FILE:
MSMg01no535_h21.g1 PHD_FILE: MSMg01no535_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:20 2005
         (610 letters)



>mm_chr4_54601375_54602384
          Length = 1010

 Score = 1180 bits (610), Expect = 0.0
 Identities = 610/610 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   acacagaggaggtttagctgttccagagactctagagtgcagtgacaggactgacctgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 acacagaggaggtttagctgttccagagactctagagtgcagtgacaggactgacctgga 751

                                                                       
Query: 61  ggagctgaaaggacttccccgaggaagcaaaattaggccagatcataacacaagaaacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ggagctgaaaggacttccccgaggaagcaaaattaggccagatcataacacaagaaacaa 691

                                                                       
Query: 121 gaaataaaggccactccaggctggggggaatcgttatttcagcgattacagataaagtag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gaaataaaggccactccaggctggggggaatcgttatttcagcgattacagataaagtag 631

                                                                       
Query: 181 agagaagttagctcagagaaacacatagttgtatggagtccagaggagagaaacatctca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 agagaagttagctcagagaaacacatagttgtatggagtccagaggagagaaacatctca 571

                                                                       
Query: 241 tttctcaagagggataaaagaggcacacaagggaggaagtggtatttaaaataggccgtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tttctcaagagggataaaagaggcacacaagggaggaagtggtatttaaaataggccgtg 511

                                                                       
Query: 301 atattttatgaaaggagggaagggagagagagagggctctgcagatgtagtgtgcgttat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atattttatgaaaggagggaagggagagagagagggctctgcagatgtagtgtgcgttat 451

                                                                       
Query: 361 ggcctcgaggtaagaaagttcaagagggatttagagagtgtggaggagtcaagtgtgctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggcctcgaggtaagaaagttcaagagggatttagagagtgtggaggagtcaagtgtgctt 391

                                                                       
Query: 421 agcatgcaggctggctgcagttaggcccggaaggtcaggtggagtcagatgatggagagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agcatgcaggctggctgcagttaggcccggaaggtcaggtggagtcagatgatggagagc 331

                                                                       
Query: 481 tcggaatgttgagcaccctgaaccaactttgtccttggccaaaaggcgctgatattttgc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tcggaatgttgagcaccctgaaccaactttgtccttggccaaaaggcgctgatattttgc 271

                                                                       
Query: 541 tttgggggataaaggtccacttaatttaattccaccaatattttctgagatctcactctg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tttgggggataaaggtccacttaatttaattccaccaatattttctgagatctcactctg 211

                     
Query: 601 agttaggtac 610
           ||||||||||
Sbjct: 210 agttaggtac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space:   600000
Effective search space used:   600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)