NNNAAACCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTTATTTGCGTGTGCATGTGTAGTTGTGTACAGGT
GCCCATGGAGGCCAGAAGAGGACATTGGATCTCCTGAAGCCGAAGTTACA
GGCACTTGTGAACTGTGGGTGACCATGGTACTGGGAACTGAACTTGGGTC
CTCTGAAAGAGCATCAATTGTTAAGTGTCCTTAACAGTTGAGCCCATCTC
TCTAGCTCTCTGTCAAAGGCCAGCTTTGACACCACAGGGTAAACCAAGGC
AGGCAGTGAAGTGTGACAGCGGTGATCACGGTCAGTGCTGATGGCAGCTG
ACTGGGGTCAGTGCTAACAGCAGCTGATGGGGGCTGCTGCTGGTGGCAGC
CAGCTATTAGAGAAAGGGGGGGATCAAACACACACACACACACACACACA
CACACACACACACACACACACACGCACACGCACACGCACACGCACACACA
GAAGCAGTATCAGGTTCTAGCCTTTTATTTTTTTCTCTTAACCCTTTTTA
TATCCCTAACACAAAGTTTTTCTATTTAGAAAGAAAGTTACCTCGTAGCC
ACAAACTAAACAATGACCACAAATACATATTCTTCAAAAACAGATTAAAA
TCATTACATAAGAGGAAATTATGACAGGAATATCATTTTTTTGAGACTTA
CATCTAACTAAACAATTTTCGCCAATCCTTTCTTTN

NNNCCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTATGTAGAGCAGACTGG
TCTTGAACTCACAGTCACAGAGATCACCTGCCCCCTCTGCCTTTCAAGTA
CAGGGATTAAAGGCATGCATCACCACAGCCTACAGCAATGTGTGTCTTAT
ATACTATGAGATAGTGAGGGAGTATAGAAGTGAAAACCAGGTGTCTGTTC
TTGCCCTTAATATTATAAGTGGCATAAATGTCACACCATTGCAAAGAACG
GGAGAAATAGTCTAAAAAGGTGGGGCTTTGGCATTCCTACCCTACATCCT
ATTTACCAGCATACATCAAACTGCTGCTGATTTGATTCCTCAAGAAAATG
ATTGGGGAATATTGTAGACTTCTTTTCCCTCCTATTAAACAGATGATAAC
TTTGATTGTTAAAGAAGAAACCACCCTGATCCCCCGTTTCCTACAGTTGA
GCATGGACTCCCTAGTGCCCATGCTGAAATCTCAGCATGTTCTAGATGGG
TCCTCTAGAGCACGGGTTTGGAGAAATGACTGTTTTCATGAAAGCACCAT
TAGCACCACAGAATTCACCCACTGCCTGTTTTTCCTTTTCCTTTCTCAAA
CCTACTCAAATAAAAGGATGAGGGTTAAGGGCAGGAAGTGGGAGGATCTA
AAAATAGTTTTGAGATTGTCTTAAAAAATAATAAAGAGTAGTTTCTTATA
N

Query= MSMg01no537_b02.g1 MSMg01no537_b02.g1 CHROMAT_FILE:
MSMg01no537_b02.g1 PHD_FILE: MSMg01no537_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:21 2005
         (634 letters)



>mm_chr4_122535368_122536401
          Length = 1034

 Score = 1210 bits (626), Expect = 0.0
 Identities = 632/634 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   actatgtagagcagactggtcttgaactcacagtcacagagatcacctgccccctctgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actatgtagagcagactggtcttgaactcacagtcacagagatcacctgccccctctgcc 260

                                                                       
Query: 61  tttcaagtacagggattaaaggcatgcatcaccacagcctacagcaatgtgtgtcttata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcaagtacagggattaaaggcatgcatcaccacagcctacagcaatgtgtgtcttata 320

                                                                       
Query: 121 tactatgagatagtgagggagtatagaagtgaaaaccaggtgtctgttcttgcccttaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactatgagatagtgagggagtatagaagtgaaaaccaggtgtctgttcttgcccttaat 380

                                                                       
Query: 181 attataagtggcataaatgtcacaccattgcaaagaacgggagaaatagtctaaaaaggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attataagtggcataaatgtcacaccattgcaaagaacgggagaaatagtctaaaaaggt 440

                                                                       
Query: 241 ggggctttggcattcctaccctacatcctatttaccagcatacatcaaactgctgctgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggggctttggcattcctaccctacatcctatttaccagcatacatcaaactgctgctgat 500

                                                                       
Query: 301 ttgattcctcaagaaaatgattggggaatattgtagacttcttttccctcctattaaaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgattcctcaagaaaatgattggggaatattgtagacttcttttccctcctattaaaca 560

                                                                       
Query: 361 gatgataactttgattgttaaagaagaaaccaccctgatcccccgtttcctacagttgag 420
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 gatgataactttgattgttaaagaagaaaccaccctgatcccccatttcctacagttgag 620

                                                                       
Query: 421 catggactccctagtgcccatgctgaaatctcagcatgttctagatgggtcctctagagc 480
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 catggactccctagtgcccatgctgagatctcagcatgttctagatgggtcctctagagc 680

                                                                       
Query: 481 acgggtttggagaaatgactgttttcatgaaagcaccattagcaccacagaattcaccca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acgggtttggagaaatgactgttttcatgaaagcaccattagcaccacagaattcaccca 740

                                                                       
Query: 541 ctgcctgtttttccttttcctttctcaaacctactcaaataaaaggatgagggttaaggg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgcctgtttttccttttcctttctcaaacctactcaaataaaaggatgagggttaaggg 800

                                             
Query: 601 caggaagtgggaggatctaaaaatagttttgaga 634
           ||||||||||||||||||||||||||||||||||
Sbjct: 801 caggaagtgggaggatctaaaaatagttttgaga 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)