XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTGTTTATCTCTGAGCTCCATTTTCAATTGGGTTATTTGGTTCTTTGCT
AATTTCTTGAATTCTTTATATATTTTGGAAATTAGCCCTCTATCAAATGT
GGGGTTTGTGAGGAAATTTTCCCCAATATGTAGGCTGTGATTTCTCCTAT
TGACTGTGTCTTTTTGCTGCCTTACAGAAGCTGTTCAACTTCATTGAAGT
CCTATTTATCAATTGCTGGTCTTAGAGCCTGAGCCATTGGATTTCTGTGA
CAATGAGTTGTAGACTCTTTCCCATTTTCTCTATTAGATTCAATATGTCT
GGTTTTATGTAGAGGTCCTTGATTCACTTGGACTTGGTCTTTGTAAAAGG
TGAAAAATATGAATCAATTTTCATTTTTCTACATACAGACTGCCAGTTTA
ACCAACATCATTTATTGAAGATGCTTTCTTTTTCCAATTGTAAGTTTTTG
GCTTCTATGCCAAAGATTAAGTGTCCATAAGTATGTGGGTTTATTTCTGT
GTAATTAGTTCTATTCAATTTATCAACACATCTGTCCCTATACCAATACC
ATGTGGTTTTTATCACTATTACTCTGTAATACAGCTTGATGTCAGGGATC
ATGGTTCCCCCAGAAGTTCTTTTGGTGTTAAGAATTGTTTTCACTATCTT
GGGGTTTTTGTTTTTGTTTTGTTTTGGATTTTGTATGAAATTGATAATTG
T

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATTATGCCGTACAAGTTGTCCTTAACCCCG
AAACAGTCCTTATACATTTGAGGTGACAGGCATTAACTAAGAACAATACA
CTTTTATTTAATACTTATAAGATTTCTATAAGCAATAACATCCATCAAAA
AGAAAATACCATTAGTCTATATTCCATGTTAAATAGTCAAAATCTCATTA
TGTGCTCCCTACTCTTTAAAGATTACTCAAAAGCACTTGGATTGTTACTG
GTGTCAAATATAAGAACAATAGGTGTACTCTCATCTATGTTCTGATTAAA
ATTCTGCCCTATTTATTTATGAAGTGACTTACCTAATATTTAGAAAAATT
CTACTCACTACAAGTTGCCTTTAATTATTAGCTCTTTTTTATTTTATCAG
AGCTTCATACACATGTGCACAATAAGCATTGTAGGATACTGTGACTGAAG
ATGGTTCACATAATGAACCATCATTATAAGGATAATTATAATGGTTGGTT
TTTGCTTTCATTTGTGTCTCCGAGATTTACCTAAATTCATTTAAATTCTC
TAATAAGGAGTATCTCATCTTAGCAAACACTAAAGATGAGAATGGGAGAC
TAAAGGATAATAAAGGTATGTGAAGATAACATAGATATGAAAGGATGGCT
TTCTTTCTTCTTTATCCAGGAGAAATGGAAAGAGCCACAGAAAATCGTGT
ATAAGGATACCAAA

Query= MSMg01no540_f17.g1 MSMg01no540_f17.g1 CHROMAT_FILE:
MSMg01no540_f17.g1 PHD_FILE: MSMg01no540_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:36 2005
         (678 letters)



>mm_chr4_51807004_51808081
          Length = 1078

 Score = 1280 bits (662), Expect = 0.0
 Identities = 674/678 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attatgccgtacaagttgtccttaaccccgaaacagtccttatacatttgaggtgacagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 attatgccgtacaagttgtccttaaccccgaaacagtccttatacatttgaggtgacagg 819

                                                                       
Query: 61  cattaactaagaacaatacacttttatttaatacttataagatttctataagcaataaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 cattaactaagaacaatacacttttatttaatacttataagatttctataagcaataaca 759

                                                                       
Query: 121 tccatcaaaaagaaaataccattagtctatattccatgttaaatagtcaaaatctcatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tccatcaaaaagaaaataccattagtctatattccatgttaaatagtcaaaatctcatta 699

                                                                       
Query: 181 tgtgctccctactctttaaagattactcaaaagcacttggattgttactggtgtcaaata 240
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 698 tgtgctccctactctttaaagattactcaaaagcacttggtttgttactggtgtcaaata 639

                                                                       
Query: 241 taagaacaataggtgtactctcatctatgttctgattaaaattctgccctatttatttat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 taagaacaataggtgtactctcatctatgttctgattaaaattctgccctatttatttat 579

                                                                       
Query: 301 gaagtgacttacctaatatttagaaaaattctactcactacaagttgcctttaattatta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gaagtgacttacctaatatttagaaaaattctactcactacaagttgcctttaattatta 519

                                                                       
Query: 361 gctcttttttattttatcagagcttcatacacatgtgcacaataagcattgtaggatact 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 518 gctcttttttattttatcagagcttcatacacatgtgcacaataagcattgtaggatatt 459

                                                                       
Query: 421 gtgactgaagatggttcacataatgaaccatcattataaggataattataatggttggtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gtgactgaagatggttcacataatgaaccatcattataaggataattataatggttggtt 399

                                                                       
Query: 481 tttgctttcatttgtgtctccgagatttacctaaattcatttaaattctctaataaggag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tttgctttcatttgtgtctccgagatttacctaaattcatttaaattctctaataaggag 339

                                                                       
Query: 541 tatctcatcttagcaaacactaaagatgagaatgggagactaaaggataataaaggtatg 600
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 338 tatctcatcttagcaaacactaaagatgagaatgggaggctaaaggataataaaggtatg 279

                                                                       
Query: 601 tgaagataacatagatatgaaaggatggctttctttcttctttatccaggagaaatggaa 660
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 278 tgaagataacatagatatgaaaggatgactttctttcttctttatccaggagaaatggaa 219

                             
Query: 661 agagccacagaaaatcgt 678
           ||||||||||||||||||
Sbjct: 218 agagccacagaaaatcgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space:   713424
Effective search space used:   713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)