XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGGCTTG
GAGGTTTCAGTTTAGGGCCATTTGGCATTTGGTCTCCTTTGGAGTCCCTG
ACTTCCCAATATGCAGAAGCACACGTGGGTCCTCTCATGGCTGAGAGACC
AACAAGAGAGGGAAAGGGGCTCGAATCCCCAGTTAGCAGAGGTCCACAGC
TCCACTCTTACAAGTTCTACCACCTTCCAGCAGTGCCACCGGCTGAGGGA
CAGGCTCCAGTGACCCTTTCCAGGTTCCAGTATCTGATAGTATCTAGCTC
TAGTAGGACTGAATCAAGTTTCAGAGATGACCCAGGTAAAGGGAGATAAT
TTGAGTATGTCCTCTTAATCTATGTGTCCTCCTAAGGACGGATCAGAGGA
AGGCAGAAAGACTGTGGGAAAGAATACAGAGACTCTGTCATAAGTTCCTG
TCACTCAAAACCACTCACATGCCGCACATCATGATGGCCTCATCTACAAA
GTACTCATAGCCACAGGTACGGCAGGGGAGTAAGACCTGTACTCATGGCC
CTCAGAGTTGTGGTAAAACCAGATTATTTCAAGGTGCTCAGGCTGGGAGT
AGAACTTGCCTGATTTTTTCCTGCAGCTTAGGGGCCAGCTTTCCAAATTC
ATCATTCGGCTCCCTTGTATCCTGAATCCTACTTATGATTTCTTGCGAGT
TNAAAACTATTGACCCGACTCACACCTGCAAATCCNACCGTAAGAAGTCT
GATTCTTGA

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTTTGGGTTTGCTGAGGAGTAACTGGCAAATGAAACTT
GCTACATTTTAGGTGCATGGAGTGATATTTGGATATGTTCTTTATTTACA
TTTCAAATGTTATCCCTTTTTCAGGTCTCCACAGCAGAAACACTCGATCC
CATCCCCCCTCCTCTGCCTCTATGGGGGTGCTCTCCCATTCACCCACCCT
GGCATTCCCCTACACTGGGGGACCTAACCCCCTCAGGCCCAAGGGCTGCT
CCTCCCACTGATGTCCAGAAAGGCCATCCTCTGCCTCATATGCAGCCTGA
GTCAAGGGTCTCTCCATGTTTATTCTTTAGTTCCTGGTCCAGTCCCCAGG
AGCTCCAAGGAGTCTGGTCAGTTGACCCTGTTGCTCCCCCCATGGGCATG
CAAACCCCCTCAGCTCCTTCAGTCCCTTCTCCAATTCCTCCACTGGGGAC
CCTGAGCTCAGTTCGATGCGAGCATCTGCCCCTGTATTTGTCAGACTCTG
GCAGAGCCTGTCAGGGAACAGCCATATCAGGCTTCCATCAGCAAGCACTA
CCTGGCATCCACAATAGTGTCCTGGTTTGGTGACTGTATATTGAATGGAT
CCCCAGGTGGGACAGTCTCTGAATGGCCTTTCCTTCAGTCTCTGCTCCAC
ACTTTGTCTCCATGTTTCCTCCTGTGAGCGTTTTGTTCTCCCTTCTAAGA
AGAACTAAAGCN

Query= MSMg01no546_b22.b1 MSMg01no546_b22.b1 CHROMAT_FILE:
MSMg01no546_b22.b1 PHD_FILE: MSMg01no546_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:18 2005
         (660 letters)



>mm_chr4_9042098_9043157
          Length = 1060

 Score = 1222 bits (632), Expect = 0.0
 Identities = 650/656 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaggcttggaggtttcagtttagggccatttggcatttggtctcctttggagtc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggcttggaggtttcagtttagggccatttggcatttggtctcctttggagtc 264

                                                                       
Query: 65  cctgacttcccaatatgcagaagcacacgtgggtcctctcatggctgagagaccaacaag 124
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 265 cctgacttcccaatatgcagaagcacaggtgggtcctctcatggctgagagaccaacaag 324

                                                                       
Query: 125 agagggaaaggggctcgaatccccagttagcagaggtccacagctccactcttacaagtt 184
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 agagggaaaggggctcgaatccccagtgagcagaggtccacagctccactcttacaagtt 384

                                                                       
Query: 185 ctaccaccttccagcagtgccaccggctgagggacaggctccagtgaccctttccaggtt 244
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctaccaccttccagtagtgccaccggctgagggacaggctccagtgaccctttccaggtt 444

                                                                       
Query: 245 ccagtatctgatagtatctagctctagtaggactgaatcaagtttcagagatgacccagg 304
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccagcatctgatagtatctagctctagtaggactgaatcaagtttcagagatgacccagg 504

                                                                       
Query: 305 taaagggagataatttgagtatgtcctcttaatctatgtgtcctcctaaggacggatcag 364
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaagggagataatttgagtttgtcctcttaatctatgtgtcctcctaaggacggatcag 564

                                                                       
Query: 365 aggaaggcagaaagactgtgggaaagaatacagagactctgtcataagttcctgtcactc 424
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 aggaaggcagaaagactgtgggaaagaatacagggactctgtcataagttcctgtcactc 624

                                                                       
Query: 425 aaaaccactcacatgccgcacatcatgatggcctcatctacaaagtactcatagccacag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaaccactcacatgccgcacatcatgatggcctcatctacaaagtactcatagccacag 684

                                                                       
Query: 485 gtacggcaggggagtaagacctgtactcatggccctcagagttgtggtaaaaccagatta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtacggcaggggagtaagacctgtactcatggccctcagagttgtggtaaaaccagatta 744

                                                                       
Query: 545 tttcaaggtgctcaggctgggagtagaacttgcctgattttttcctgcagcttaggggcc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttcaaggtgctcaggctgggagtagaacttgcctgattttttcctgcagcttaggggcc 804

                                                                   
Query: 605 agctttccaaattcatcattcggctcccttgtatcctgaatcctacttatgatttc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agctttccaaattcatcattcggctcccttgtatcctgaatcctacttatgatttc 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)