XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTT
CATTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCA
CCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTTA
GGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATT
GACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATT
TGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAAT
TTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTAT
AAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATT
TGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTACAC
GATAACAACCAGTTGTGCCAGCACCNATTGTTGAAAAATGCTGCCTTTTC
TTCACCGGGATGGGTTTTAGCTCCCCCGGGGCAAAAATAAAGGGGACCCT
AGGGGGGGGGGGGGGTTTTTTTTTGGGGGGGGCCAAAATTATTATTTCCC
TAGGGGGGACACCTATTGTGGGGCGGCTCCAAAAAAAAAAAAAGAAAGGG
GGAGGTTTTTTATTTTATTTTATATACACCTCGAACCGCGCGTTGTTGTG
CCGTTTATTTCGCTTTAAGTGTTTTGCCTGTGA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXATTATGCCTAACTCCTGAGAACAGGGCCTGCCTTGATT
GTGGTTGGATAACCAATGACATTCCCTTGGAGAAAAGAATTGGTTTTTTT
TTTTTAAATTTTTATTTTTATTTCACAATTGCATCTTGATTAGGTTGAGA
CTGAGTCTGCCTCAAATTTTTAATGCTCGAATTTTTTTCAGGCTTGTGTT
GCCACAGTCTATGTAGTTTATTCTTTGCACCCACTATACTATAATGTAGG
CCTAATCAAATGAGGCAGATGTCAATGCAAATACAAACTTCAAGTTGTCC
TTAGACTGTATGTATAGGTAAACATTTTGTGTTTTATAATTCATAGTTTG
GGTTCTTCAATTTATTCTTCTATCTTGTCTGTCAGGTTGGAGTCAGGGAA
GTTGATAACATTGAATTCTATTAAGATTACTTTCTGCTTTTGCCTAATTA
TTCTTGTGGCAGACAATTTCTTTTTAAATTATCTTTGCAGTAATACTGTT
CCATTTATAATAATTATTAAAATTCCTTGCTAAATTTAAGAATTAGATCA
ATTGTGCTGGATTTTTAATAATTTAGATAGATCTTAATCATTTAACATAA
AGAGTAAAGAAATTGGAACATAGCATAGAACTTTTTTTTCCCTTAATGGA
TTATTCTGTGAAAGGTTCAAATTTAACTTCATCTCAAGTGACTAAGA

Query= MSMg01no547_j13.g1 MSMg01no547_j13.g1 CHROMAT_FILE:
MSMg01no547_j13.g1 PHD_FILE: MSMg01no547_j13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:16 2005
         (647 letters)



>mm_chr4_37529595_37530641
          Length = 1047

 Score = 1181 bits (611), Expect = 0.0
 Identities = 642/657 (97%), Gaps = 11/657 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   attatgcctaactcctgagaaca-gggcctgccttgattgtggttggataaccaatgaca 59
           ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 192 attatgcctaactcctgagaa-aggggcctgccttgattgtggttggataaccaatgaca 250

                                                                       
Query: 60  ttcccttggagaaaagaattg-------gtttttt--ttttttaaatttttatttttatt 110
           |||||||||||||||||||||       |||||||  |||||| ||||||||||||||||
Sbjct: 251 ttcccttggagaaaagaattgtttttttgtttttttgtttttttaatttttatttttatt 310

                                                                       
Query: 111 tcacaattgcatcttgattaggttgagactgagtctgcctcaaatttttaatgctcgaat 170
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 311 tcacaattgcatcttgattaggttgagactaagtctgcctcaaatttttaatgctcgaat 370

                                                                       
Query: 171 ttttttcaggcttgtgttgccacagtctatgtagtttattctttgcacccactatactat 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttttttcaggcttgtgttgccacagtctatgtagtttattctttgcacccactatactat 430

                                                                       
Query: 231 aatgtaggcctaatcaaatgaggcagatgtcaatgcaaatacaaacttcaagttgtcctt 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aatgtaggcctaatcaaatgaggcagatgtcaatgcaaatacaaacttcaagttgtcctt 490

                                                                       
Query: 291 agactgtatgtataggtaaacattttgtgttttataattcatagtttgggttcttcaatt 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agactgtatgtataggtaaacattttgtgttttataattcatagtttgggttcttcaatt 550

                                                                       
Query: 351 tattcttctatcttgtctgtcaggttggagtcagggaagttgataacattgaattctatt 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tattcttctatcttgtctgtcaggttggagtcagggaagttgataacattgaattctatt 610

                                                                       
Query: 411 aagattactttctgcttttgcctaattattcttgtggcagacaatttctttttaaattat 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aagattactttctgcttttgcctaattattcttgtggcagacaatttctttttaaattat 670

                                                                       
Query: 471 ctttgcagtaatactgttccatttataataattattaaaattccttgctaaatttaagaa 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ctttgcagtaatactgttccatttataataattattaaaattccttgctaaatttaagaa 730

                                                                       
Query: 531 ttagatcaattgtgctggatttttaataatttagatagatcttaatcatttaacataaag 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 731 ttagatcaattgtgctggatttttaataatttagatagatcttaatcatttaacataaat 790

                                                                    
Query: 591 agtaaagaaattggaacatagcatagaacttttttttcccttaatggattattctgt 647
           |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 791 agtaaagaaattggaacatagcatagaactttttttccccttaatggattattctgt 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)