BAC Information

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BAC

Clone NameB6Ng01-004N03
Chromosome5 (Build37)
Map Location 74,136,224 - 74,283,250
singlet/doubletdoublet
Overlap genenone
Upstream geneTec, Slain2, Slc10a4, LOC667127, Fryl, Ociad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik, LOC627733, Dcun1d4, BC031901, Sgcb, Spata18
Downstream geneUsp46, 2700023E23Rik, Rasl11b, Scfd2, Fip1l1, Lnx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004N03.bB6Ng01-004N03.g
ACCDH842127DH842128
length1911,082
definitionDH842127|Mus musculus domesticus DNA, BAC clone: B6Ng01-004N03, 5' end.DH842128|Mus musculus domesticus DNA, BAC clone: B6Ng01-004N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,136,224 - 74,136,414)(74,282,170 - 74,283,250)
sequence
gaattctgtttccctggtaagatcacttctgtttacatggtaagagtcgg
tttgagttgggcctgggtcatcatcatcttaggactttgtcagtagcctt
gccatttgggggcctgctttggattgtaaactaacaaagagaaagacaaa
aacttctgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattccgagctattagagatgataggtcactactccaaaacaagagatg
ttagtctgggccataaaggattagataactatgaggccagaggtcgaaac
cggaagcttaacttttacagtccataaaatgagaagttcctcctagaact
ctgagcccggctctcacaatgatttagagatttcatctacgtcgtgactg
cgttggcttctcacagcaaccagggatggtggggcaggtcaactctaatt
ctcgcgggacaaggaagaatgaagagccatgggttaagtgacttacataa
aataaacaaaagtggagagagccttgcctcacggagacggccaagatttc
tcaacaccaaagttttctgacttccttagaacaattaaggcattagctgt
ttgttctccaatccacaatatgtttctttaccaacccagtactaaattgt
tcttcagaatatgtagttgttgttgggctattgagttgctgcggccaaga
aggatttccttcacttactcatttagcaactattgattgatttgtgtgtg
atatgggaaacttttctaactagaggtttaagaggaggggcaaccatgtc
acgtagagttcaaagtatggtcatgggccaagttagacatttgaggacag
ggttacaattcgtgggccccacactgcgaataggtagtttgtgagttgta
tagttgcaaaccaagtatcttgagtttgatttttccatttgctttaaaga
gttcccagtggaaatgttgtatttttagaaacttttgaagacgaggtgag
agaatcacagggatccaacgtcaaggcaattctccattctagccacgtgt
gatcattgaacagcttgccaagggtctcaacagctggtcactggtcccag
aataaatcttcttatgggcaagcagcctgcctctttctcatttaaaattc
agcttaaagctaatgtaagactttgacctgcttaattttgcttcaggtct
tggattcagagtaaaataaatatactcatactttttttccttacttttgg
tgacaaagtctgtcagttgtttccccagtact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_74136224_74136414
seq2: B6Ng01-004N03.b_45_235

seq1  GAATTCTGTTTCCCTGGTAAGATCACTTCTGTTTACATGGTAAGAGTCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTCCCTGGTAAGATCACTTCTGTTTACATGGTAAGAGTCGG  50

seq1  TTTGAGTTGGGCCTGGGTCATCATCATCTTAGGACTTTGTCAGTAGCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTGGGCCTGGGTCATCATCATCTTAGGACTTTGTCAGTAGCCTT  100

seq1  GCCATTTGGGGGCCTGCTTTGGATTGTAAACTAACAAAGAGAAAGACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTGGGGGCCTGCTTTGGATTGTAAACTAACAAAGAGAAAGACAAA  150

seq1  AACTTCTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  191
      |||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  191

seq1: chr5_74282170_74283250
seq2: B6Ng01-004N03.g_68_1149 (reverse)

seq1  AGTACTGGGG-AACAACTGACAGACTTTGTCA-CAAAAGTAAGGAAAAAA  48
      |||||||||| ||||||||||||||||||||| |||||||||||||||||
seq2  AGTACTGGGGAAACAACTGACAGACTTTGTCACCAAAAGTAAGGAAAAAA  50

seq1  AGTATGAGTATAATTTATTTTACTCTGAATCAAGGACCTTGAAGCAAAAT  98
      ||||||||||| ||||||||||||||||||| | |||| |||||||||||
seq2  AGTATGAGTAT-ATTTATTTTACTCTGAATCCAAGACC-TGAAGCAAAAT  98

seq1  TAAGCAGGTCAAAGTCTTACATTAGCTTTAAGCTGAATTTTAAATGAGAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGGTCAAAGTCTTACATTAGCTTTAAGCTGAATTTTAAATGAGAA  148

seq1  AGAGGCAGGCTGCTTGCCCATAAGAAGATTTATTCTGGGACCAGTGACCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGCTGCTTGCCCATAAGAAGATTTATTCTGGGACCAGTGACCA  198

seq1  GCTGTTGAGA-CCTTGGCAAGCTGTTCAATGATCACACGTGGCTAGAATG  247
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGAGACCCTTGGCAAGCTGTTCAATGATCACACGTGGCTAGAATG  248

seq1  GAGAATTGCCTTGACGTTGGATCCCTGTGATTCTCTCACCTCGTCTTCAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGCCTTGACGTTGGATCCCTGTGATTCTCTCACCTCGTCTTCAA  298

seq1  AAGTTTCTAAAAATACAACATTTCCACTGGGAACTCTTTAAAGCAAATGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTAAAAATACAACATTTCCACTGGGAACTCTTTAAAGCAAATGG  348

seq1  AAAAATCAAACTCAAGATACTTGGTTTGCAACTATACAACTCACAAACTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAAACTCAAGATACTTGGTTTGCAACTATACAACTCACAAACTA  398

seq1  CCTATTCGCAGTGTGGGGCCCACGAATTGTAACCCTGTCCTCAAATGTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCGCAGTGTGGGGCCCACGAATTGTAACCCTGTCCTCAAATGTCT  448

seq1  AACTTGGCCCATGACCATACTTTGAACTCTACGTGACATGGTTGCCCCTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGCCCATGACCATACTTTGAACTCTACGTGACATGGTTGCCCCTC  498

seq1  CTCTTAAACCTCTAGTTAGAAAAGTTTCCCATATCACACACAAATCAATC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAACCTCTAGTTAGAAAAGTTTCCCATATCACACACAAATCAATC  548

seq1  AATAGTTGCTAAATGAGTAAGTGAAGGAAATCCTTCTTGGCCGCAGCAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTGCTAAATGAGTAAGTGAAGGAAATCCTTCTTGGCCGCAGCAAC  598

seq1  TCAATAGCCCAACAACAACTACATATTCTGAAGAACAATTTAGTACTGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGCCCAACAACAACTACATATTCTGAAGAACAATTTAGTACTGGG  648

seq1  TTGGTAAAGAAACATATTGTGGATTGGAGAACAAACAGCTAATGCCTTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAAGAAACATATTGTGGATTGGAGAACAAACAGCTAATGCCTTAA  698

seq1  TTGTTCTAAGGAAGTCAGAAAACTTTGGTGTTGAGAAATCTTGGCCGTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTAAGGAAGTCAGAAAACTTTGGTGTTGAGAAATCTTGGCCGTCT  748

seq1  CCGTGAGGCAAGGCTCTCTCCACTTTTGTTTATTTTATGTAAGTCACTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGAGGCAAGGCTCTCTCCACTTTTGTTTATTTTATGTAAGTCACTTA  798

seq1  ACCCATGGCTCTTCATTCTTCCTTGTCCCGCGAGAATTAGAGTTGACCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGGCTCTTCATTCTTCCTTGTCCCGCGAGAATTAGAGTTGACCTG  848

seq1  CCCCACCATCCCTGGTTGCTGTGAGAAGCCAACGCAGTCACGACGTAGAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCATCCCTGGTTGCTGTGAGAAGCCAACGCAGTCACGACGTAGAT  898

seq1  GAAATCTCTAAATCATTGTGAGAGCCGGGCTCAGAGTTCTAGGAGGAACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTCTAAATCATTGTGAGAGCCGGGCTCAGAGTTCTAGGAGGAACT  948

seq1  TCTCATTTTATGGACTGTAAAAGTTAAGCTTCCGGTTTCGACCTCTGGCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTTATGGACTGTAAAAGTTAAGCTTCCGGTTTCGACCTCTGGCC  998

seq1  TCATAGTTATCTAATCCTTTATGGCCCAGACTAACATCTCTTGTTTTGGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTTATCTAATCCTTTATGGCCCAGACTAACATCTCTTGTTTTGGA  1048

seq1  GTAGTGACCTATCATCTCTAATAGCTCGGAATTC  1081
      ||||||||||||||||||||||||||||||||||
seq2  GTAGTGACCTATCATCTCTAATAGCTCGGAATTC  1082