BAC Information

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BAC

Clone NameB6Ng01-005N11
Chromosome5 (Build37)
Map Location 126,900,037 - 127,043,724
singlet/doubletdoublet
Overlap genenone
Upstream geneDhx37, Bri3bp, Aacs, Tmem132b, EG231736, LOC100039178, LOC665760
Downstream geneLOC100040327, Tmem132c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005N11.bB6Ng01-005N11.g
ACCDH842870DH842871
length278966
definitionDH842870|Mus musculus domesticus DNA, BAC clone: B6Ng01-005N11, 5' end.DH842871|Mus musculus domesticus DNA, BAC clone: B6Ng01-005N11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,043,447 - 127,043,724)(126,900,037 - 126,900,616)
sequence
ctcattaaaatattcacagaaggtgattcgatgtggcagagcattttcta
ctcatccccttctgacggatggtgtgttgatcagaacagctgctctactc
atgaaccttctgcaggaggaaagagaatctgggaaagaaggcagcaacat
ccagtgtccatacagcttggtaaggtgaacttagcacttctgagataatt
ttacattcattcttagacatcacagtcagttggtttgtctttacaagctg
gaagaggggggagagagagagagagaga
gaattcctttctctgagacacccttggttaagcaatagtgtttgtcaggg
ggtatttcttcctcataggaccctttagaatactagttttcaactttcct
gcactggctagttttgtttcaacttgacacaggctggagttatcacaatg
aaaggagcttcagttggggaaatgcctccacgagatccagctgtaaggca
ttttctcaattagtgatcaaggggggagggccccttgtgggtggtgccat
ctctgggctggtagtcttggttctataagagagcaggctgagcaagccag
gggaagcaagccagtaaagaacactcctccattacctctgcatcagctcc
tgctttcttacctgcttgagttccagtcctgacttccttggtgatgaaca
gcagtatggaagtgtaaactgaataaaccctttcctccccaagtgcttct
tggtcatgatgttttgtccaggaatagaaaccctgattaagatacttcct
aatgctgccactcttcaaaagagcttctcatgttgtggtgaccccaaaac
atagaattatattgttgttacttcctagctgtaattttcctactcttatg
aatcataatgtaactccttccatgggtgttttgtttcctattctaagaag
gggcaaagtgtccacactttggtcttcgttctcttgagtttaatgtgttt
agcaaattgtatcttatatcttgggtatcctaagtttctgggctaatatc
cacttatcagtgagtacatattgtgaaagttctttgtgattgggttacct
cactcaggatgatgcccttccagtccatccatttgggctaggatttcata
atttcattcttttttaatagctgagtagtactccattgtgtaaatgtacc
acattttcttgtatccatttctctgttgaggggtttctgggttctttcag
cttctggctattataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_127043447_127043724
seq2: B6Ng01-005N11.b_53_330 (reverse)

seq1  TCTCTCTCTCTCTCTCTCCCCCCTCTTCCAGCTTGTAAAGACAAACCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCCCCCCTCTTCCAGCTTGTAAAGACAAACCAAC  50

seq1  TGACTGTGATGTCTAAGAATGAATGTAAAATTATCTCAGAAGTGCTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTGATGTCTAAGAATGAATGTAAAATTATCTCAGAAGTGCTAAGT  100

seq1  TCACCTTACCAAGCTGTATGGACACTGGATGTTGCTGCCTTCTTTCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTACCAAGCTGTATGGACACTGGATGTTGCTGCCTTCTTTCCCAG  150

seq1  ATTCTCTTTCCTCCTGCAGAAGGTTCATGAGTAGAGCAGCTGTTCTGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTTCCTCCTGCAGAAGGTTCATGAGTAGAGCAGCTGTTCTGATC  200

seq1  AACACACCATCCGTCAGAAGGGGATGAGTAGAAAATGCTCTGCCACATCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACCATCCGTCAGAAGGGGATGAGTAGAAAATGCTCTGCCACATCG  250

seq1  AATCACCTTCTGTGAATATTTTAATGAG  278
      ||||||||||||||||||||||||||||
seq2  AATCACCTTCTGTGAATATTTTAATGAG  278

seq1: chr5_126900037_126900616
seq2: B6Ng01-005N11.g_69_648

seq1  GAATTCCTTTCTCTGAGACACCCTTGGTTAAGCAATAGTGTTTGTCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCTCTGAGACACCCTTGGTTAAGCAATAGTGTTTGTCAGGG  50

seq1  GGTATTTCTTCCTCATAGGACCCTTTAGAATACTAGTTTTCAACTTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTCTTCCTCATAGGACCCTTTAGAATACTAGTTTTCAACTTTCCT  100

seq1  GCACTGGCTAGTTTTGTTTCAACTTGACACAGGCTGGAGTTATCACAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGCTAGTTTTGTTTCAACTTGACACAGGCTGGAGTTATCACAATG  150

seq1  AAAGGAGCTTCAGTTGGGGAAATGCCTCCACGAGATCCAGCTGTAAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGCTTCAGTTGGGGAAATGCCTCCACGAGATCCAGCTGTAAGGCA  200

seq1  TTTTCTCAATTAGTGATCAAGGGGGGAGGGCCCCTTGTGGGTGGTGCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAATTAGTGATCAAGGGGGGAGGGCCCCTTGTGGGTGGTGCCAT  250

seq1  CTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG  300

seq1  GGGAAGCAAGCCAGTAAAGAACACTCCTCCATTACCTCTGCATCAGCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAAGCCAGTAAAGAACACTCCTCCATTACCTCTGCATCAGCTCC  350

seq1  TGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACA  400

seq1  GCAGTATGGAAGTGTAAACTGAATAAACCCTTTCCTCCCCAAGTGCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGGAAGTGTAAACTGAATAAACCCTTTCCTCCCCAAGTGCTTCT  450

seq1  TGGTCATGATGTTTTGTCCAGGAATAGAAACCCTGATTAAGATACTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATGATGTTTTGTCCAGGAATAGAAACCCTGATTAAGATACTTCCT  500

seq1  AATGCTGCCACTCTTCAAAAGAGCTTCTCATGTTGTGGTGACCCCAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGCCACTCTTCAAAAGAGCTTCTCATGTTGTGGTGACCCCAAAAC  550

seq1  ATAGAATTATATTGTTGTTACTTCCTAGCT  580
      ||||||||||||||||||||||||||||||
seq2  ATAGAATTATATTGTTGTTACTTCCTAGCT  580