BAC Information

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BAC

Clone NameB6Ng01-007G17
Chromosome5 (Build37)
Map Location 97,072,187 - 97,215,792
singlet/doubletdoublet
Overlap geneFras1
Upstream geneLOC100041380, EG666203, EG666209, LOC665943, LOC433921, Cxcl13, EG666231, Cnot6l, LOC100040559, Mrpl1
Downstream geneAnxa3, EG666266, LOC670358, Bmp2k, Paqr3, LOC100040598, EG433923, EG666293, C80008, Gk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007G17.bB6Ng01-007G17.g
ACCDH843993DH843994
length1,141882
definitionDH843993|Mus musculus domesticus DNA, BAC clone: B6Ng01-007G17, 5' end.DH843994|Mus musculus domesticus DNA, BAC clone: B6Ng01-007G17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,072,187 - 97,073,339)(97,214,906 - 97,215,792)
sequence
gaattcaagaattatgtctaaattgtttatctggacttagcatcctcaaa
tgagggaaaacaccaaatatcatttccacccgtgattggaattcctgtgc
cagagctcatcacggggaaaacagcgtttgattgttttccttgcctcctc
ttaggctaacatctctccatgtttcattctaactctccctttctgacgga
ggagggccagctcagaaacagagctcaaatgtctgtcaaggaaactcaaa
gttctcggcctctgcaaaattacgcagtttccatgccaagaaatcctact
tggctgtcagcttaggtggtcttccatgttcataaccacaggaacttttc
tgttccttcctctctaaccaggggctgtcagtctgtggtgcaaaacgagg
ttctctcagatcctccatgttagaaatgatttcataactgtgctcgtttt
caaggctctgttttcagtcatttttccctcaggactgattcaacaaaata
aatgaagtagattaacgttataaaccttcagagtacgtgtactaacttgc
acatgtacctgctacttaaggacttagcaatattgcatgaaggaaaagat
gagttattccggctttatagctgggtaggaaaatgggccttgagaggaaa
tgagttctctgagacaaacagttcctctccagacctctattgagctgtta
ctctataccaggtactgtacttagttgttgtgatcggagccagggactca
cagatgctaagagcatgcttaccactgagctctcttgactctgtgttaat
tgtttgcattcatcgtttcattttgtcttcccagtggcctcaggaagtgg
gtactactgtatattttattaggcctctagaggtttaggaagataggaaa
atggagaagaaaagcagtcaaatgatcatgtaatagacttgcccaacctc
aaactcatgtattcacccggctatgccttcctatcatccaggtacccgcc
tcaaaagacccctagacattgctctcaaacatgagctctctaattgatca
gtgtttccggacatcaaaacctccagcttcaacatgatcatgattataca
cgcagaactaccagtgaggcagtagctttgcttctcttgcc
gaattcagcactcgagagacagtacattcagagcatcttaatgtaagggc
ttaacacagagtgcgtacagacagacgtacgggcaacagagagtgggtac
agacatacgggcaacatagagtgcatgcagatgtatgggcacggttgccg
tggatcccaggcatcatcaagtccccgaggactagggaaagcatggagtc
attgctgtccccacacagccaagggaggaaaggcaacactcagcaccgag
acaaacagaaactttggaagagagactgtccaacagggcttgtggccaag
aaggaaaccacaacagggcaggagggagtagcagtggctgacaacctgaa
gctcctctcaattcagtggctccacatggccaatcacaactgaagaagcc
agcacacagggggcctgtcaggttccaggatctattggtaccaagcatcg
ctttgtttttttttttttgttttttttttttaatatttctcagtgggagg
tttgatctggttttgaacaactcttggaaactgtcccagaggctggaccc
taataaacttttatcatgtgttgactagtcctagaacctgatggctttaa
accagaacagacctaaggataaaacttctgccagcctttaaagaaaggct
tgcagcatggttctgccgtcttatggtaactgagtgatgggactcccttc
agcacaagcatccaatcagggtaataggagcctgagggcaatgataagct
actcaccgtctgcttgctaaggctttgaaatcgggtatttgtttgaaatt
taaagaaaattaggcacttgcctcagaattgttatagatgaggtagaagt
agcaatgggtcatggtaggtatgtggttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_97072187_97073339
seq2: B6Ng01-007G17.b_42_1182

seq1  GAATTCAAGAATTATGTCTAAATTGTTTATCTGGACTTAGCATCCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAATTATGTCTAAATTGTTTATCTGGACTTAGCATCCTCAAA  50

seq1  TGAGGGAAAACACCAAATATCATTTCCACCCGTGATTGGAATTCCTGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGAAAACACCAAATATCATTTCCACCCGTGATTGGAATTCCTGTGC  100

seq1  CAGAGCTCATCACGGGGAAAACAGCGTTTGATTGTTTTCCTTGCCTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTCATCACGGGGAAAACAGCGTTTGATTGTTTTCCTTGCCTCCTC  150

seq1  TTAGGCTAACATCTCTCCATGTTTCATTCTAACTCTCCCTTTCTGACGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTAACATCTCTCCATGTTTCATTCTAACTCTCCCTTTCTGACGGA  200

seq1  GGAGGGCCAGCTCAGAAACAGAGCTCAAATGTCTGTCAAGGAAACTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCCAGCTCAGAAACAGAGCTCAAATGTCTGTCAAGGAAACTCAAA  250

seq1  GTTCTCGGCCTCTGCAAAATTACGCAGTTTCCATGCCAAGAAATCCTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCGGCCTCTGCAAAATTACGCAGTTTCCATGCCAAGAAATCCTACT  300

seq1  TGGCTGTCAGCTTAGGTGGTCTTCCATGTTCATAACCACAGGAACTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCAGCTTAGGTGGTCTTCCATGTTCATAACCACAGGAACTTTTC  350

seq1  TGTTCCTTCCTCTCTAACCAGGGGCTGTCAGTCTGTGGTGCAAAACGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTCCTCTCTAACCAGGGGCTGTCAGTCTGTGGTGCAAAACGAGG  400

seq1  TTCTCTCAGATCCTCCATGTTAGAAATGATTTCATAACTGTGCTCGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCAGATCCTCCATGTTAGAAATGATTTCATAACTGTGCTCGTTTT  450

seq1  CAAGGCTCTGTTTTCAGTCATTTTTCCCTCAGGACTGATTCAACAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTCTGTTTTCAGTCATTTTTCCCTCAGGACTGATTCAACAAAATA  500

seq1  AATGAAGTAGATTAACGTTATAAACCTTCAGAGTACGTGTACTAACTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTAGATTAACGTTATAAACCTTCAGAGTACGTGTACTAACTTGC  550

seq1  ACATGTACCTGCTACTTAAGGACTTAGCAATATTGCATGAAGGAAAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTACCTGCTACTTAAGGACTTAGCAATATTGCATGAAGGAAAAGAT  600

seq1  GAGTTATTCCGGCTTTATAGCTGGGTAGGAAAATGGGCCTTGAGAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATTCCGGCTTTATAGCTGGGTAGGAAAATGGGCCTTGAGAGGAAA  650

seq1  TGAGTTCTCTGAGACAAACAGTTCCTCTCCAGACCTCTATTGAGCTGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTCTGAGACAAACAGTTCCTCTCCAGACCTCTATTGAGCTGTTA  700

seq1  CTCTATACCAGGTACTGTACTTAGTTGTTGTGATCGGAGCCAGGGACTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATACCAGGTACTGTACTTAGTTGTTGTGATCGGAGCCAGGGACTCA  750

seq1  CAGATGCTAAGAGCATGCTTACCACTGAGCTCTCTTGACTCTGTGTTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTAAGAGCATGCTTACCACTGAGCTCTCTTGACTCTGTGTTAAT  800

seq1  TGTTTGCATTCATCGTTTCATTTTGTCTTCCCAGTGGCCTCAGGAAGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCATTCATCGTTTCATTTTGTCTTCCCAGTGGCCTCAGGAAGTGG  850

seq1  GTACTACTGTATATTTTATTAGGCCTCTAGAGGTTTAGGAAAGATAGGAA  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTACTACTGTATATTTTATTAGGCCTCTAGAGGTTTAGG-AAGATAGGAA  899

seq1  AATGGAGAAGAAAAGCAGTCAAATGATCATGTAATAGACTTGCCCAACCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAAGAAAAGCAGTCAAATGATCATGTAATAGACTTGCCCAACCT  949

seq1  CAAAACTCATGTATTTCACCCGGCTATGCCTTCCTATCATCCAGGTACCC  1000
      | ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  C-AAACTCATGTA-TTCACCCGGCTATGCCTTCCTATCATCCAGGTACCC  997

seq1  GCCCTCAAAAGACCCCCTAGAACATTGCCTCTCAAACATGAGCTCTCTAA  1050
      | |||||||||| ||||||| |||||| ||||||||||||||||||||||
seq2  G-CCTCAAAAGA-CCCCTAG-ACATTG-CTCTCAAACATGAGCTCTCTAA  1043

seq1  TTGGATCAGTGTTTCCGGGGACATCAAAACCTCCAGCTACAAACATGATC  1100
      || |||||||||||||  |||||||||||||||||||| | |||||||||
seq2  TT-GATCAGTGTTTCC--GGACATCAAAACCTCCAGCTTC-AACATGATC  1089

seq1  ATGATTATAACAGCAAGACTACCAGTGAGGGCAGTAGC-TTGCTTCTCTG  1149
      |||||||||   |||  ||||||||||| ||||||||| |||||||||| 
seq2  ATGATTATACACGCAGAACTACCAGTGA-GGCAGTAGCTTTGCTTCTCT-  1137

seq1  TGCC  1153
      ||||
seq2  TGCC  1141

seq1: chr5_97214906_97215792
seq2: B6Ng01-007G17.g_66_947 (reverse)

seq1  AAACAACCACATACCTACCATGACCCCATTGCTACTTCTACCTCATCCTA  50
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  AAACAACCACATACCTACCATGA-CCCATTGCTACTTCTACCTCAT-CTA  48

seq1  TAACAATTCTGAGGCAAGTGCCTTAATTTTCTTTTAAATTTTCAAACAAA  100
      |||||||||||||||||||||| |||||||||||  || |||||||||||
seq2  TAACAATTCTGAGGCAAGTGCC-TAATTTTCTTT--AAATTTCAAACAAA  95

seq1  TACCCGATTTTCAAAGCCTTAGCAAGCAGACGGTGAGTAGCTTATCATTG  150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCGA-TTTCAAAGCCTTAGCAAGCAGACGGTGAGTAGCTTATCATTG  144

seq1  CCCTCAGGCTCCTATTACCCTGATTGGATGCTTGTGCTGAA-GGAGTCCC  199
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCCTCAGGCTCCTATTACCCTGATTGGATGCTTGTGCTGAAGGGAGTCCC  194

seq1  ATCACTCAGTTACCATAAGACGGCAGAACCATGCTGCAAGCCTTTCTTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCAGTTACCATAAGACGGCAGAACCATGCTGCAAGCCTTTCTTTA  244

seq1  AAGGCTGGCAGAAGTTTTATCCTTAGGTCTGTTCTGGTTTAAAGCCATCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGGCAGAAGTTTTATCCTTAGGTCTGTTCTGGTTTAAAGCCATCA  294

seq1  GGTTCTAGGACTAGTCAACACATGATAAAAGTTTATTAGGGTCCAGCCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTAGGACTAGTCAACACATGATAAAAGTTTATTAGGGTCCAGCCTC  344

seq1  TGGGACAGTTTCCAAGAGTTGTTCAAAACCAGATCAAACCTCCCACTGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAGTTTCCAAGAGTTGTTCAAAACCAGATCAAACCTCCCACTGAG  394

seq1  AAATATTAAAAAAAAAAAACAAAAAAAAAAAAACAAAGCGATGCTTGGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAAAAAAAAAAAACAAAAAAAAAAAAACAAAGCGATGCTTGGTA  444

seq1  CCAATAGATCCTGGAACCTGACAGGCCCCCTGTGTGCTGGCTTCTTCAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGATCCTGGAACCTGACAGGCCCCCTGTGTGCTGGCTTCTTCAGT  494

seq1  TGTGATTGGCCATGTGGAGCCACTGAATTGAGAGGAGCTTCAGGTTGTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGGCCATGTGGAGCCACTGAATTGAGAGGAGCTTCAGGTTGTCA  544

seq1  GCCACTGCTACTCCCTCCTGCCCTGTTGTGGTTTCCTTCTTGGCCACAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGCTACTCCCTCCTGCCCTGTTGTGGTTTCCTTCTTGGCCACAAG  594

seq1  CCCTGTTGGACAGTCTCTCTTCCAAAGTTTCTGTTTGTCTCGGTGCTGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTGGACAGTCTCTCTTCCAAAGTTTCTGTTTGTCTCGGTGCTGAG  644

seq1  TGTTGCCTTTCCTCCCTTGGCTGTGTGGGGACAGCAATGACTCCATGCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCTTTCCTCCCTTGGCTGTGTGGGGACAGCAATGACTCCATGCTT  694

seq1  TCCCTAGTCCTCGGGGACTTGATGATGCCTGGGATCCACGGCAACCGTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGTCCTCGGGGACTTGATGATGCCTGGGATCCACGGCAACCGTGC  744

seq1  CCATACATCTGCATGCACTCTATGTTGCCCGTATGTCTGTACCCACTCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACATCTGCATGCACTCTATGTTGCCCGTATGTCTGTACCCACTCTC  794

seq1  TGTTGCCCGTACGTCTGTCTGTACGCACTCTGTGTTAAGCCCTTACATTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCCGTACGTCTGTCTGTACGCACTCTGTGTTAAGCCCTTACATTA  844

seq1  AGATGCTCTGAATGTACTGTCTCTCGAGTGCTGAATTC  887
      ||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTCTGAATGTACTGTCTCTCGAGTGCTGAATTC  882