MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-007L08
Chromosome	5 (Build37)
Map Location	4,969,678 - 5,103,319
singlet/doublet	doublet
Overlap gene	Pftk1
Upstream gene	Akap9, Cyp51, ENSMUSG00000053178, LOC100041073, Fzd1, LOC667678
Downstream gene	1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2, Steap1, LOC727711, LOC546854
Link	Open Mouse BAC browser

Click to get alignment info.

name	Akap9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100986 MGI:2178217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp51 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13121 MGI:106040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000053178 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208595 MGI:3704243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041073 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Fzd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14362 MGI:1196625
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667678 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667678
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Pftk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18647 MGI:894318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700015F17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381716 MGI:2686532
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1 EST

name	Cldn12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64945 MGI:1929288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtpbp10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207704 MGI:2385599
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667699 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667699
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG667705 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667705 MGI:3646213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	A330021E22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207686 MGI:2443778
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Steap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74051 MGI:1921301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Steap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70358 MGI:1917608
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC727711 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:727711
definition	note : heat shock protein 8 pseudogene pseudo : _no_value

name	LOC546854 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 Proteins pseudo : _no_value

name	Akap9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125661047 GeneID:100986 MGI:2178217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein (yotiao) 9 transcript_id : NM_194462.2

name	Cyp51 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061450 GeneID:13121 MGI:106040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 51 transcript_id : NM_020010.2

name	ENSMUSG00000053178 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111161291 GeneID:208595 MGI:3704243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, ENSMUSG00000053178 transcript_id : NM_001042670.1

name	LOC100041073 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253509 GeneID:100041073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical protein LOC100041073 transcript_id : XM_001475743.1

name	Fzd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981156 GeneID:14362 MGI:1196625
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : frizzled homolog 1 (Drosophila) transcript_id : NM_021457.2

name	Pftk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755043 GeneID:18647 MGI:894318
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PFTAIRE protein kinase 1 transcript_id : NM_011074.1

name	1700015F17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374166 GeneID:381716 MGI:2686532
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1 EST product : RIKEN cDNA 1700015F17 gene transcript_id : XM_622366.3

name	Cldn12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29789137 GeneID:64945 MGI:1929288
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 12 transcript_id : NM_022890.1

name	Gtpbp10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83320122 GeneID:207704 MGI:2385599
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTP-binding protein 10 (putative) transcript_id : NM_153116.1

name	EG667705 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374169 GeneID:667705 MGI:3646213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : predicted gene, EG667705 transcript_id : XM_991961.1

name	A330021E22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348359 GeneID:207686 MGI:2443778
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A330021E22 gene transcript_id : NM_172447.2

name	Steap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354154 GeneID:74051 MGI:1921301
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : six transmembrane epithelial antigen of prostate 2 transcript_id : NM_028734.3

name	Steap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370339 GeneID:70358 MGI:1917608
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : six transmembrane epithelial antigen of the prostate 1 transcript_id : NM_027399.2

name	Akap9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125661048 CCDS:CCDS19070.1 GeneID:100986 MGI:2178217
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0000242 - pericentriolar material [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : A kinase (PRKA) anchor protein (yotiao) 9 protein_id : NP_919444.2

name	Cyp51 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71061451 CCDS:CCDS19071.1 GeneID:13121 MGI:106040
definition	GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0008398 - sterol 14-demethylase activity [Evidence TAS] GO_process : GO:0006695 - cholesterol biosynthesis [Evidence TAS] codon_start : 1 note : cytochrome P450, 51 product : cytochrome P450, family 51 protein_id : NP_064394.2

name	LOC100041073 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253510 GeneID:100041073
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475793.1

name	ENSMUSG00000053178 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111161292 GeneID:208595 MGI:3704243
definition	codon_start : 1 note : mitochondrial transcription termination factor-like product : mitochondrial transcription termination factor-like precursor protein_id : NP_001036135.1

name	Fzd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981157 CCDS:CCDS19072.1 GeneID:14362 MGI:1196625
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004926 - non-G-protein coupled 7TM receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA]; GO:0007267 - cell-cell signaling [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0030855 - epithelial cell differentiation [Evidence IGI] [Evidence IDA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IGI] codon_start : 1 product : frizzled 1 protein_id : NP_067432.2

name	Pftk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755044 CCDS:CCDS19073.1 GeneID:18647 MGI:894318
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation function : cdk-related kinase product : PFTAIRE protein kinase 1 protein_id : NP_035204.1

name	1700015F17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82801644 GeneID:381716 MGI:2686532
definition	codon_start : 1 product : hypothetical protein protein_id : XP_622366.2

name	Cldn12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789138 CCDS:CCDS19074.1 GeneID:64945 MGI:1929288
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 product : claudin 12 protein_id : NP_075028.1

name	Gtpbp10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83320123 GeneID:207704 MGI:2385599
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA] codon_start : 1 product : claudin 12 protein_id : NP_694756.1

name	EG667705 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374170 GeneID:667705 MGI:3646213
definition	codon_start : 1 product : hypothetical protein protein_id : XP_997055.1

name	A330021E22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369597 CCDS:CCDS19075.1 GeneID:207686 MGI:2443778
definition	codon_start : 1 product : hypothetical protein LOC207686 protein_id : NP_766035.1

name	Steap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249344 GeneID:74051 MGI:1921301
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0005769 - early endosome [Evidence ISS]; GO:0030173 - integral to Golgi membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0030140 - trans-Golgi network transport vesicle [Evidence ISS]; GO:0042598 - vesicular fraction [Evidence ISS] GO_function : GO:0050660 - FAD binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence ISS] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006897 - endocytosis [Evidence ISS]; GO:0006893 - Golgi to plasma membrane transport [Evidence ISS]; GO:0045055 - regulated secretory pathway [Evidence ISS]; GO:0009725 - response to hormone stimulus [Evidence ISS] codon_start : 1 product : six transmembrane epithelial antigen of prostate 2 protein_id : NP_083010.2

name	Steap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312568 CCDS:CCDS19077.1 GeneID:70358 MGI:1917608
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0050660 - FAD binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : six transmembrane epithelial antigen of the prostate 1 protein_id : NP_081675.1

name	LOC667678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667678
definition	number : 1 pseudo : _no_value

name	LOC667678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667678
definition	number : 2 pseudo : _no_value

name	LOC667678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667678
definition	number : 3 pseudo : _no_value

name	LOC667699 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667699
definition	number : 1 pseudo : _no_value

name	LOC546854 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546854
definition	number : 1 pseudo : _no_value

name	LOC546854 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546854
definition	number : 2 pseudo : _no_value

name	LOC546854 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546854
definition	number : 3 pseudo : _no_value

clone name	MSMg01-265H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512N13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-140D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530C11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-430N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169M19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545N21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-386K06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-213L10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-456M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435F17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-186D20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-429B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381E19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-102N02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-340P18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-340D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075J14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-079L10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-321G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176P10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-354L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403I03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-113C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242F19
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-007L08.b	B6Ng01-007L08.g
ACC	DH844196	DH844197
length	171	628
definition	DH844196\|Mus musculus domesticus DNA, BAC clone: B6Ng01-007L08, 5' end.	DH844197\|Mus musculus domesticus DNA, BAC clone: B6Ng01-007L08, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(5,103,149 - 5,103,319)	(4,969,678 - 4,970,305)
sequence	gaattcaaccatttacacatgagattcctgctgtacctcagagtttcctt aattcatatgattaatgttttcaacatcatactaaaataaatttaagttt aaggagtgagaaagagagagagagagagagagagagagagagagagagag agagagggagagagagagaga	gaattcattgtttttaaaagctgagtctgatgaggtttcttgtatgtacg tatctagggattaatatggcttggctatggaactggggaaaaaaaaacag aagtgggggaagagggtatcagagtgtggaagaggctgcagggtgttcaa atggatggaagagaggaaaagggagtagaatcaacaaaaacaatttgctt gaaagcgaagtaatgaaatataacaagccaaggctagccccaccagggct cagaggctcctgatgctcttcgcttccagagaagccagaaattcagccct ctaaatgagtttgcccagatctggatttttcaaccattcatgtcttggtt ctttatcattgtaataggtactcaaccattcatgtcttggttctttatca ttgtcataggtgctcaaccattcatgtcttggttctttatcactgtaata ggtgctcagtgaaacgagctaggggtgagagatgtgtgcaggagggattg gactgggttgttatgaggacctgagctggattcccagaatcgatgtgact ctatgtgacaatagcctggactggtagtgaatgtttatagtcccagtgtc ccagtgctggagagagggggtggggtgg
quality values	Open. Hide. 59 59 11 30 59 49 15 59 59 59 38 61 61 61 61 49 22 59 32 59 61 61 61 49 49 61 31 31 28 30 38 39 27 32 43 43 49 49 59 59 59 61 59 61 61 61 61 61 61 61 61 59 61 61 59 49 61 61 59 59 61 59 61 61 61 59 49 38 61 61 59 59 39 52 59 52 59 59 61 61 61 61 61 61 61 55 61 61 55 55 61 61 61 55 55 61 47 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 50 61 52 53 50 50 50 61 53 61 50 61 50 61 50 61 50 61 47 61 47 61 47 61 53 61 53 61 53 61 47 47 53 53 53 57 53 57 53 57 47 47 47 53 50 47 42 47 47 26 10 16	Open. Hide. 61 49 52 55 61 49 36 49 52 44 28 43 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 52 55 61 52 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 55 55 55 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 50 61 61 53 61 61 61 61 53 53 50 50 53 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 57 53 53 57 57 57 57 53 52 53 57 57 57 57 57 53 57 53 57 57 57 53 57 53 53 53 57 53 47 57 53 47 36 53 57 57 57 57 53 52 47 53 47 32 57 47 25 30 53 52 57 52 52 57 57 47 47 47 57 47 57 57 50 52 47 57 52 46 46 46 37 42 37 47 28 41 52 57 57 31 22 29 52 53 53 42 43 57 53 53 34 31 53 52 53 50 53 52 34 47 53 40 30 37 32 22 52 38 50 40 43 37 43 40 52 53 27 57 34 53 40 38 57 34 14 45 34 44 53 53 34 34 46 25 27 34 38 24 46 25 30 35 35 33 30 31 37 37 23 27 29 35 40 31 35 47 37 38 33 39 31 15 53 16 53 37 53 44 39 17 11 34 23 16 14 4 9 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_5103149_5103319
seq2: B6Ng01-007L08.b_41_211 (reverse)

seq1  TCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50

seq1  TCTCTCTCTTTCTCACTCCTTAAACTTAAATTTATTTTAGTATGATGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTTTCTCACTCCTTAAACTTAAATTTATTTTAGTATGATGTTG  100

seq1  AAAACATTAATCATATGAATTAAGGAAACTCTGAGGTACAGCAGGAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTAATCATATGAATTAAGGAAACTCTGAGGTACAGCAGGAATCT  150

seq1  CATGTGTAAATGGTTGAATTC  171
      |||||||||||||||||||||
seq2  CATGTGTAAATGGTTGAATTC  171

seq1: chr5_4969678_4970305
seq2: B6Ng01-007L08.g_67_694

seq1  GAATTCATTGTTTTTAAAAGCTGAGTCTGATGAGGTTTCTTGTATGTACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTTTTAAAAGCTGAGTCTGATGAGGTTTCTTGTATGTACG  50

seq1  TATCTAGGGATTAATATGGCTTGGCTATGGAACTGGGGAAAAAAAAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAGGGATTAATATGGCTTGGCTATGGAACTGGGGAAAAAAAAACAG  100

seq1  AAGTGGGGGAAGAGGGTATCAGAGTGTGGAAGAGGCTGCAGGGTGTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGGGAAGAGGGTATCAGAGTGTGGAAGAGGCTGCAGGGTGTTCAA  150

seq1  ATGGATGGAAGAGAGGAAAAGGGAGTAGAATCAACAAAAACAATTTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGAAGAGAGGAAAAGGGAGTAGAATCAACAAAAACAATTTGCTT  200

seq1  GAAAGCGAAGTAATGAAATATAACAAGCCAAGGCTAGCCCCACCAGGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCGAAGTAATGAAATATAACAAGCCAAGGCTAGCCCCACCAGGGCT  250

seq1  CAGAGGCTCCTGATGCTCTTCGCTTCCAGAGAAGCCAGAAATTCAGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCTCCTGATGCTCTTCGCTTCCAGAGAAGCCAGAAATTCAGCCCT  300

seq1  CTAAATGAGTTTGCCCAGATCTGGATTTTTCAACCATTCATGTCTTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGAGTTTGCCCAGATCTGGATTTTTCAACCATTCATGTCTTGGTT  350

seq1  CTTTATCATTGTAATAGGTACTCAACCATTCATGTCTTGGTTCTTTATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCATTGTAATAGGTACTCAACCATTCATGTCTTGGTTCTTTATCA  400

seq1  TTGTCATAGGTGCTCAACCATTCATGTCTTGGTTCTTTATCACTGTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATAGGTGCTCAACCATTCATGTCTTGGTTCTTTATCACTGTAATA  450

seq1  GGTGCTCAGTGAAACGAGCTAGGGGTGAGAGATGTGTGCAGGAGGGATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTCAGTGAAACGAGCTAGGGGTGAGAGATGTGTGCAGGAGGGATTG  500

seq1  GACTGGGTTGTTATGAGGACCTGAGCTGGATTCCCAGAATCGATGTGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGTTGTTATGAGGACCTGAGCTGGATTCCCAGAATCGATGTGACT  550

seq1  CTATGTGACAATAGCCTGGACTGGTAGTGAATGTTTATAGTCCCAGTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGACAATAGCCTGGACTGGTAGTGAATGTTTATAGTCCCAGTGTC  600

seq1  CCAGTGCTGGAGAGAGGGGGTGGGGTGG  628
      ||||||||||||||||||||||||||||
seq2  CCAGTGCTGGAGAGAGGGGGTGGGGTGG  628

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information