BAC Information

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BAC

Clone NameB6Ng01-010I09
Chromosome5 (Build37)
Map Location 19,823,631 - 19,823,737
singlet/doubletsinglet
Overlap geneMagi2
Upstream genenone
Downstream geneLOC100041850, Phtf2, LOC622367, Tmem60, Rsbn1l, Ptpn12, EG626903, A530088I07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010I09.bB6Ng01-010I09.g
ACCDH846169DH846170
length1,246934
definitionDH846169|Mus musculus domesticus DNA, BAC clone: B6Ng01-010I09, 5' end.DH846170|Mus musculus domesticus DNA, BAC clone: B6Ng01-010I09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatgcctaaacattataaaagcaatctaaagcaaacca
gtagtcaacatcaaagtcaatggtgagaagctggaagcaatcccactaaa
accagggactagacaagtctgctcactttctgcctacctattcaacattg
tacttgacgtcctagccagagcaattcgtaaacaaaaggcgatcaagggg
atacaaatttgaaaggaagaagtgaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaacttccaccagagaactcctaaacc
tgataaacatcttcagtgcagtggctggatataaaattaactcaaacaag
tcagtgacctttctgtacacaaaggataaacaggctgagaaataaattat
ggaaacaacacccttcacactagtcacaaataatataaaattgacgatgt
cagaagatggaaagatctcccatgctcatggattgacaggataaatacag
taaaaatggctatcctgccgaaagcaatgtacagattcaatgcaatccct
atgaaaattccaactcaattcttcaatgaattagaaagggcaatttgcaa
attcatctggaataacaaaaagcataggatagcaaaaactattcttaaca
ataaaagaatctctggggggaatcaccatgcctgacttcaagctgtacta
cagagctattgtgataaaaactgcatgatattggtacagagataaatagg
tagatcaatggatgagatctgaagacccagaaatgaacccacacacctat
ggtcacctgatctttgacaagggagctaaaaccatcccgtggaaaacgac
atcattttcaacaaatagtgctggcacaactagcagttatcatgtagaga
attcaaattgatccattcttatcaccttgtacagagctcagtctagtgga
tcaaagacctccacatacaaccagaagacactgaaatttatagaggagca
gtggggaaatgcctcaagatatgggcacaggagaaaaattcctaaaagaa
cagcaatgctttgctgtagatcaagatgacatggaacctcataattgcag
cctcttagcattgatcttcaatagacaaggccaacaaatggtagactacc
ctttacggatgatatcatttacaggacaagctgatcgaatcaaccttaac
tggtcagctacagtcacgggatccagaccgagcgccgaagagggta
gaattccaaagaagtaggccctattggaaggaacatggggcccctaatta
aggagctagagaaagtaaccaaggggctaatggggtctgcaaccctgtag
gaggatcaaaaatattagctaactagtacctcccagatctatgtctctag
ttgcatatgtagcagaggatgacctagttggccatcaataagaagagagg
cccttggttttgtgaagatcagatgtcccagtacagggggatgccgtgcc
agcatgcagaagtgggtagtttgaggagcagggcatgaagagggtatagg
cgacttttgggaaagcatttgaaatgtaaatgaagaaaatatctaataag
aaaaaaagtaggtcctaatgctcatgaaggaatagacttgctagcaagag
taaggggaagctctctagagggaacttccttcttccatgtcttttatata
tgctggcaaaaaaaggtatgacccagttttaggtgtatcttcgatcctca
aaaaatctggattaaaggtgtgtctttccatcttcaattgaattttattt
ctcaaagagatagatttattatctatcaaaggtgtactgacctgctagag
ttttagttgattccagatgaggttaacaacaagaatagccattacaagcc
caccccttgtcatctagacatacattcatatatccctttttcatgcttat
cttccaaatggaagtaatagccaagtcataattatacctatatacctatc
ccatggacaatctcaaaagcattatatatttaacagagtcataattgtgt
acaacatgatataaatatccctcatacaaccataaatgcattataaattt
taatatgtccactcaagggaattacaagtagttcatgatcttaattacat
ccacaatctgacacagttgcctccatagcacttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_19823631_19823737
seq2: B6Ng01-010I09.g_208_422 (reverse)

seq1  --TTTTTTAATTAGTTATTTTCCTCATTTACATTTCAAATGCCATCCC--  46
        |||| | ||||| ||||||| |||||||||||||||||||  ||||  
seq2  TTTTTTCTTATTAGATATTTTCTTCATTTACATTTCAAATGCTTTCCCAA  50

seq1  --CTTTCCTAGTTTCCTCTCCA-------------AAAGT----------  71
         |  |||| |  ||||| ||             ||| |          
seq2  AAGTCGCCTA-TACCCTCTTCATGCCCTGCTCCTCAAACTACCCACTTCT  99

seq1  ------------------CCCCTATAC-----------------------  80
                        ||||| |||                       
seq2  GCATGCTGGCACGGCATCCCCCTGTACTGGGACATCTGATCTTCACAAAA  149

seq1  ---------------------------------------CCTCTGCTACA  91
                                             |||||||||||
seq2  CCAAGGGCCTCTCTTCTTATTGATGGCCAACTAGGTCATCCTCTGCTACA  199

seq1  TATGCAACTAGAGACA  107
      ||||||||||||||||
seq2  TATGCAACTAGAGACA  215