BAC Information

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BAC

Clone NameB6Ng01-011D20
Chromosome5 (Build37)
Map Location 79,069,212 - 79,070,398
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC669227, LOC100039398, Mthfr-ps1, EG384187
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011D20.bB6Ng01-011D20.g
ACCDH846678DH846679
length1,178861
definitionDH846678|Mus musculus domesticus DNA, BAC clone: B6Ng01-011D20, 5' end.DH846679|Mus musculus domesticus DNA, BAC clone: B6Ng01-011D20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatgaagtttatattttctatgtagatgaatgaacacatatga
taacttaacaacagaaatattgtggggattgaataatagcagattgcttg
gaaaatgtccaagttcatgctcgtggatttttgtttaataggtgttttgg
gttgactaggttttgatttgttgtgatttgttaatcttgtatgtgatttt
gttgctgtttacttatgaacaaactgactttttgtctatatattagagca
ggatgaagttacatatataatttctttctagtatacttatatgacatact
gagaattatagcctttttcaagttcagtttattctatatacagtgagcac
aaaaaataacagatgagataaaatatttttgtttatcctgtctcctgaat
attttaaagctaatggtgcctttcttattgttaaagactgtggattatgg
aaaacacacacagttgttttcccaagagttctggtagacagagcactttg
tttctcatacaaggtttaattttttagttgaatttatataacacataaat
tctatatctcattaacttcatcattaaatgattgcagattttgccattca
agtcgtatccccaaggaaaccttatgaataaattttcctgagagtttgtt
tatttcataaaataatccacttctattagaaaaataagccacatgaaggc
tcacaaccatctgaacagctacagtatactcacacacacacacacacaca
cacacacacacacacacacacacacaaatatatatatcttttaaaaattg
aatgtttaagttggaagaaattatttttaagaaaataaatcattttcttt
aaataggaaagacagtttatctgagcatgcattcattcaaaacataatta
tttgcatataatttcaaaagtacataatatgtaactagactaaaatataa
tattaaggattgccagaataacggctgttaggcttttaatttggttgtaa
atgtgatataactgaattctaattgcttgcatgttcttaaacaattgttc
agtgtaacaaatgacaagatgaacccaaggtagtaaaatctgactggtga
cttagaaaacttttaaagtgaagttataagtgtttttaaatgaatttcac
tgatgcttggaatcacctgggttgacac

gaattctgttgcagccagcaaagctgaaaggagttgaagatttttgacat
cagacatcgaaatacactttagtttgcccagcttgttttttggtatttcc
tcactatggtctcctttggaaagttaatgcatattctgtgccactgtatg
ttggaattatttgatctgattttttttttttttttgattccattggagat
caaagttaagagagtacttgaatttcaaaagagactttgacctttgaaac
aagttttaaacagttatagactatggtaattttgaaatttgaatgaatgt
atatatgatatgggttccagggggtggagtttagtggtttgaataaaaat
ggccctcatagggtcatagggaatgatactatttggtattatggctttgt
tggagaaattgcagtcttcttggaagaagtatgtctcagtctcttcctaa
tacctacatatccagatgtagaactatcagctacctctccagcagcatgt
ctgactgcatgctaccatgttactgggccatgagggtaaaggactaaact
tctgaactgtaagccaacctaaataaaatattttcctctataagtgtttt
catggttatggtgtttctatacattggacattgtccagtttgtgggtctc
tatattaattatcatctactgcaaggagacattttttttgatgagggtta
ttcttttacgttatattcacctcacttttacattcaaagaaactagtatt
ttcattttgtggtgagaactatatgataaagtgtgttaaagatgtttaac
cggcataagggctcataaaactaattttctctgtttgtgaagggaatttg
tggtggtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_79069212_79070398
seq2: B6Ng01-011D20.b_45_1222

seq1  GAATTCATATGAAGTTTATATTTTCTATGTAGATGAATGAACACATATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGAAGTTTATATTTTCTATGTAGATGAATGAACACATATGA  50

seq1  TAACTTAACAACAGAAATATTGTGGGGATTGAATAATAGCAGATTGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTAACAACAGAAATATTGTGGGGATTGAATAATAGCAGATTGCTTG  100

seq1  GAAAATGTCCAAGTTCATGCTCGTGGATTTTTGTTTAATAGGTGTTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTCCAAGTTCATGCTCGTGGATTTTTGTTTAATAGGTGTTTTGG  150

seq1  GTTGACTAGGTTTTGATTTGTTGTGATTTGTTAATCTTGTATGTGATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTAGGTTTTGATTTGTTGTGATTTGTTAATCTTGTATGTGATTTT  200

seq1  GTTGCTGTTTACTTATGAACAAACTGACTTTTTGTCTATATATTAGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGTTTACTTATGAACAAACTGACTTTTTGTCTATATATTAGAGCA  250

seq1  GGATGAAGTTACATATATAATTTCTTTCTAGTATACTTATATGACATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAAGTTACATATATAATTTCTTTCTAGTATACTTATATGACATACT  300

seq1  GAGAATTATAGCCTTTTTCAAGTTCAGTTTATTCTATATACAGTGAGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTATAGCCTTTTTCAAGTTCAGTTTATTCTATATACAGTGAGCAC  350

seq1  AAAAAATAACAGATGAGATAAAATATTTTTGTTTATCCTGTCTCCTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAACAGATGAGATAAAATATTTTTGTTTATCCTGTCTCCTGAAT  400

seq1  ATTTTAAAGCTAATGGTGCCTTTCTTATTGTTAAAGACTGTGGATTATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGCTAATGGTGCCTTTCTTATTGTTAAAGACTGTGGATTATGG  450

seq1  AAAACACACACAGTTGTTTTCCCAAGAGTTCTGGTAGACAGAGCACTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACACACAGTTGTTTTCCCAAGAGTTCTGGTAGACAGAGCACTTTG  500

seq1  TTTCTCATACAAGGTTTAATTTTTTAGTTGAATTTATATAACACATAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATACAAGGTTTAATTTTTTAGTTGAATTTATATAACACATAAAT  550

seq1  TCTATATCTCATTAACTTCATCATTAAATGATTGCAGATTTTGCCATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATCTCATTAACTTCATCATTAAATGATTGCAGATTTTGCCATTCA  600

seq1  AGTCGTATCCCCAAGGAAACCTTATGAATAAATTTTCCTGAGAGTTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTATCCCCAAGGAAACCTTATGAATAAATTTTCCTGAGAGTTTGTT  650

seq1  TATTTCATAAAATAATCCACTTCTATTAGAAAAATAAGCCACATGAAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATAAAATAATCCACTTCTATTAGAAAAATAAGCCACATGAAGGC  700

seq1  TCACAACCATCTGAACAGCTACAGTATACTCACACACACACACACACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCATCTGAACAGCTACAGTATACTCACACACACACACACACACA  750

seq1  CACACACACACACACACACACACACAAATATATATATCTTTTAAAAATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACAAATATATATATCTTTTAAAAATTG  800

seq1  AATGTTTAAGTTGGAAGAAATTATTTTCAAGAAAATAAATCATTTTCTTT  850
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AATGTTTAAGTTGGAAGAAATTATTTTTAAGAAAATAAATCATTTTCTTT  850

seq1  AAATAGGAAAGACAGTTTATCTGAGCATGCATTCATTCAAAACATAATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGAAAGACAGTTTATCTGAGCATGCATTCATTCAAAACATAATTA  900

seq1  TTTGCATATAATTTC-AAAGTACATAATATGTAACTAGACTAAAATATAA  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTGCATATAATTTCAAAAGTACATAATATGTAACTAGACTAAAATATAA  950

seq1  TATTAAGGATTGCCAGAAATAACGGCTGTTAGGCTTTTAATTTGGTTGTA  999
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TATTAAGGATTGCCAG-AATAACGGCTGTTAGGCTTTTAATTTGGTTGTA  999

seq1  AATGTGATTTTAACTGAATTCTAATTGC-TGCATGTTCTAAACAAATTGT  1048
      ||||||| | |||||||||||||||||| |||||||||| ||  ||||||
seq2  AATGTGA-TATAACTGAATTCTAATTGCTTGCATGTTCTTAAACAATTGT  1048

seq1  TCAGTGTAACAAATGACAAGAATGAAACCCAAGTAGGTAAAATCTGACTG  1098
      |||||||||||||||||||| ||| ||||||||   ||||||||||||||
seq2  TCAGTGTAACAAATGACAAG-ATG-AACCCAAGGTAGTAAAATCTGACTG  1096

seq1  GTGACTTAGAAAACTTCT-AAGTGAAGTTAATTAAAGTGTTTTTAATGGA  1147
      |||||||||||||||| | |||||||||||    ||||||||||||  ||
seq2  GTGACTTAGAAAACTTTTAAAGTGAAGTTA---TAAGTGTTTTTAAATGA  1143

seq1  CATTTCAGTTGTGTTTGCTTGGATCACCCTGGGTTGACAC  1187
       |||||| |  || |||   | |||| |||||||||||||
seq2  -ATTTCACTGATGCTTG---GAATCA-CCTGGGTTGACAC  1178


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