BAC Information

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BAC

Clone NameB6Ng01-011I23
Chromosome5 (Build37)
Map Location 22,668,677 - 22,668,907
singlet/doubletsinglet
Overlap geneLhfpl3
Upstream geneReln, LOC100041982, Orc5l, LOC100042049, LOC668232, LOC100042067, LOC671222, LOC625174, EG625219, LOC100042101
Downstream geneLOC100042082, 4930580E04Rik, BC050254, Srpk2, Pus7, Rint1, 4933427G23Rik, Tomm7, LOC671410, Drctnnb1a, LOC627317, Klhl7, LOC100042211
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011I23.bB6Ng01-011I23.g
ACCDH846909DH846910
length1,178231
definitionDH846909|Mus musculus domesticus DNA, BAC clone: B6Ng01-011I23, 5' end.DH846910|Mus musculus domesticus DNA, BAC clone: B6Ng01-011I23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccca
acggaggagctagagaaagtacccacggagctaaagggatctgcaaccct
ataggtggatcacattatgactaccagtaccccggaagctctgacttcta
gctgcatatgtatcaaagatggcctattcggtcatcactgaagaagagtc
cattgaccaccaactttatatgctcagaatacggggaacgctaggccaaa
cggggaatggggcggttaggggaatgct
cagtaaattcagacgggagatagacacatgacttctggtccagacactgg
ctagaatggctatttgtttagaatttttctctgtgtcttgaagggttgtc
agtgttcgagctgaggaggaggctggagatacacactatttcccactttc
ctttcaagatcctgaatacctttttataagttggagggttgaaggcagaa
tgcctctgtcatggggggcggggggggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_22668677_22668907
seq2: B6Ng01-011I23.g_73_303 (reverse)

seq1  CTCCCCCCCCCCGCCCCCCATGACAGAGGCATTCTGCCTTCAACCCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCCCCCGCCCCCCATGACAGAGGCATTCTGCCTTCAACCCTCCA  50

seq1  ACTTATAAAAAGGTATTCAGGATCTTGAAAGGAAAGTGGGAAATAGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAAAAAGGTATTCAGGATCTTGAAAGGAAAGTGGGAAATAGTGTG  100

seq1  TATCTCCAGCCTCCTCCTCAGCTCGAACACTGACAACCCTTCAAGACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCAGCCTCCTCCTCAGCTCGAACACTGACAACCCTTCAAGACACA  150

seq1  GAGAAAAATTCTAAACAAATAGCCATTCTAGCCAGTGTCTGGACCAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAATTCTAAACAAATAGCCATTCTAGCCAGTGTCTGGACCAGAAG  200

seq1  TCATGTGTCTATCTCCCGTCTGAATTTACTG  231
      |||||||||||||||||||||||||||||||
seq2  TCATGTGTCTATCTCCCGTCTGAATTTACTG  231