BAC Information

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BAC

Clone NameB6Ng01-012F21
Chromosome5 (Build37)
Map Location 59,846,790 - 59,847,500
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041385, LOC100041396, LOC666499, EG625870, LOC100041425
Downstream geneLOC546866, Cbfa2t2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012F21.bB6Ng01-012F21.g
ACCDH847481DH847482
length1,217713
definitionDH847481|Mus musculus domesticus DNA, BAC clone: B6Ng01-012F21, 5' end.DH847482|Mus musculus domesticus DNA, BAC clone: B6Ng01-012F21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaaat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
aggtgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattcaggcttgtacaaccactctggaaatcagtctggcagttcctcag
aaaattggacatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccactatg
ttcaaagcagccttatttataatagccagaagctggaaagaacctagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagtcaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
aaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggatacccaagatataagatataatttgctaaactcatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaggagttacagagacaaagtttgtagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccacataatca
gcatccaaacgctgacaccattgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctatagaaagtagccaggagctaaaggggtctgcaaccctaa
taggtggacacatatgactaccagtaccccggagctcttgactctagctg
caaatatatcaaagatggctagttggcatcactgaaagaaaggcccatgg
acttgcaacttatatgccccagtacaggggaacacagcgaatggactggt
gtgtggcagagagagtgtctgcgcgctcttcccaaattgggccatactcc
acctcacttgcaagtga
gaattcttctcacaaattaaagaaataaattacactagcactctttatat
agatccagtgattattaattaaacaaaaataaaaaatacatattttcaat
taaaaaatgggtacccacgatgagtactcaacaaatggattaccatcata
cactaatcaataacaaaaaattgaaatgacaataagctcaacaaaagtga
aaatatatttttacaagtttaattaatgcttgaatgaataagtgaagtct
tgtatgactttaaaattataagatcctcacatttcagctagcatgtcaag
aaataatataattattttaactcattctaaaaatctgttatttttcttga
gataaaacttctaagatgtgctatgactgtaaaatcaattatgtatgata
aaatttaaataaaataatttatatgattaaaaatttttggaaaataattt
atgtgataaaaaactgaataacaacttatgttgcaagaagttaataaaca
gaaataaaattttaaatttaaaaccagctgtgatttaaagttctgagagt
aaaacatagaagctatatataaacaggagccagtcaaactcaatgaagaa
aaattgacaaactataatcacaaagtatatatatatatgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtattaacaaagtgaatatatatggggtgtgtaa
gatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_59846790_59847500
seq2: B6Ng01-012F21.g_66_778 (reverse)

seq1  ATATATATATA---TACACACACTATATATATACACTTTGTTAAATACAC  47
      |||||||||||   ||||||| | |||||||| ||||||||| |||||||
seq2  ATATATATATATCTTACACACCCCATATATATTCACTTTGTT-AATACAC  49

seq1  ACACACACACACACACACACACACACATATATATATATACTTTGTGATTA  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACATATATATATATACTTTGTGATTA  99

seq1  TAGTTTGTCAATTTTTCTTCATTGAGTTTGACTGGCTCCTGTTTATATAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGTCAATTTTTCTTCATTGAGTTTGACTGGCTCCTGTTTATATAT  149

seq1  AGCTTCTATGTTTTACTCTCAGAACTTTAAATCACAGCTGGTTTTAAATT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTATGTTTTACTCTCAGAACTTTAAATCACAGCTGGTTTTAAATT  199

seq1  TAAAATTTTATTTCTGTTTATTAACTTCTTGCAACATAAGTTGTTATTCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTATTTCTGTTTATTAACTTCTTGCAACATAAGTTGTTATTCA  249

seq1  GTTTTTTATCACATAAATTATTTTCCAAAAATTTTTAATCATATAAATTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTATCACATAAATTATTTTCCAAAAATTTTTAATCATATAAATTA  299

seq1  TTTTATTTAAATTTTATCATACATAATTGATTTTACAGTCATAGCACATC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTAAATTTTATCATACATAATTGATTTTACAGTCATAGCACATC  349

seq1  TTAGAAGTTTTATCTCAAGAAAAATAACAGATTTTTAGAATGAGTTAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGTTTTATCTCAAGAAAAATAACAGATTTTTAGAATGAGTTAAAA  399

seq1  TAATTATATTATTTCTTGACATGCTAGCTGAAATGTGAGGATCTTATAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATATTATTTCTTGACATGCTAGCTGAAATGTGAGGATCTTATAAT  449

seq1  TTTAAAGTCATACAAGACTTCACTTATTCATTCAAGCATTAATTAAACTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGTCATACAAGACTTCACTTATTCATTCAAGCATTAATTAAACTT  499

seq1  GTAAAAATATATTTTCACTTTTGTTGAGCTTATTGTCATTTCAATTTTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATATATTTTCACTTTTGTTGAGCTTATTGTCATTTCAATTTTTT  549

seq1  GTTATTGATTAGTGTATGATGGTAATCCATTTGTTGAGTACTCATCGTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGATTAGTGTATGATGGTAATCCATTTGTTGAGTACTCATCGTGG  599

seq1  GTACCCATTTTTTAATTGAAAATATGTATTTTTTATTTTTGTTTAATTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCATTTTTTAATTGAAAATATGTATTTTTTATTTTTGTTTAATTAA  649

seq1  TAATCACTGGATCTATATAAAGAGTGCTAGTGTAATTTATTTCTTTAATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACTGGATCTATATAAAGAGTGCTAGTGTAATTTATTTCTTTAATT  699

seq1  TGTGAGAAGAATTC  711
      ||||||||||||||
seq2  TGTGAGAAGAATTC  713