BAC Information

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BAC

Clone NameB6Ng01-013O04
Chromosome5 (Build37)
Map Location 46,867,756 - 46,868,336
singlet/doubletsinglet
Overlap genenone
Upstream geneLap3, LOC100040762, Med28, 9630031F12Rik, 9630001P10Rik, 1600023N17Rik, Lcorl, LOC100041576, EG666103
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013O04.bB6Ng01-013O04.g
ACCDH848587DH848588
length919181
definitionDH848587|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O04, 5' end.DH848588|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattaagaagcagaagagtccccagggcaggagactctttgcatg
aattaggtgtgatgaatgaaatacacatttgagacctatctatcatctag
catagaaatatgagtttgcagcagaatggaccaactccccgaaacaaaat
gtaagaatccatagttctatgtctatgtcataaagaaaaacatccacctg
tgctaagagcagcagtcctgagctgaagaccagctcagtcctctactgga
tattaaacctgttagcaagtggttctccaatccctcagaggaaatcttgt
gttctcttcactatgactgatgaacacacaaatgatagcatagctgatta
agttgacaacccagaatatccaccctcatagattcataacctgggactgt
tttcctaccttgattttaaaataattatttcttttttcattcaattatgt
aaaaaggtcttatgggcctcatctgttcaaagcagtcagctatccccagt
ggacctccatattcctttattcagacctgtgcagcctgaaccatacaagt
aagcttcccttctcccacccatcttccctgcttgctgagtgcctctaggg
caccccagcagccctgagaagtctgcaattcccagctggactccattctc
cctccacttctccacccaacttcatcaacctgaaaaccctgaaacataca
gacctgctgatccagaaacatacaacaaaaatcagaggcctgtcacacca
caaccatcaagattaatctccttcccaatacctactacaacagaaagagc
cagagaccaaagaatcaagatagctaaaggccctcaaaagaacacaatca
acaaaagccaaggaaataagataccttcagaatacagctatcctagtata
gcaagccctggatatccta
catcaaaatcactaaattagaagccagaatatatatatgcagagacctgg
tggagacctgcacaggctctgcatatgctgccccagtctctgccagttca
tgtgatctttcatcatgttgacttagaaggcatttttgtgatgtgatgtg
atgtgatgtgatgtgatgtgatgtgatgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_46867756_46868336
seq2: B6Ng01-013O04.b_47_627 (reverse)

seq1  GCAGGGAAGATGGGTGGGAGAAGGGAAGCTTACTTGTATGGTTCAGGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAAGATGGGTGGGAGAAGGGAAGCTTACTTGTATGGTTCAGGCTG  50

seq1  CACAGGTCTGAATAAAGGAATATGGAGGTCCACTGGGGATAGCTGACTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTCTGAATAAAGGAATATGGAGGTCCACTGGGGATAGCTGACTGC  100

seq1  TTTGAACAGATGAGGCCCATAAGACCTTTTTACATAATTGAATGAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACAGATGAGGCCCATAAGACCTTTTTACATAATTGAATGAAAAAA  150

seq1  GAAATAATTATTTTAAAATCAAGGTAGGAAAACAGTCCCAGGTTATGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATTATTTTAAAATCAAGGTAGGAAAACAGTCCCAGGTTATGAAT  200

seq1  CTATGAGGGTGGATATTCTGGGTTGTCAACTTAATCAGCTATGCTATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGGGTGGATATTCTGGGTTGTCAACTTAATCAGCTATGCTATCAT  250

seq1  TTGTGTGTTCATCAGTCATAGTGAAGAGAACACAAGATTTCCTCTGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTTCATCAGTCATAGTGAAGAGAACACAAGATTTCCTCTGAGGG  300

seq1  ATTGGAGAACCACTTGCTAACAGGTTTAATATCCAGTAGAGGACTGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGAACCACTTGCTAACAGGTTTAATATCCAGTAGAGGACTGAGCT  350

seq1  GGTCTTCAGCTCAGGACTGCTGCTCTTAGCACAGGTGGATGTTTTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCAGCTCAGGACTGCTGCTCTTAGCACAGGTGGATGTTTTTCTTT  400

seq1  ATGACATAGACATAGAACTATGGATTCTTACATTTTGTTTCGGGGAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATAGACATAGAACTATGGATTCTTACATTTTGTTTCGGGGAGTTG  450

seq1  GTCCATTCTGCTGCAAACTCATATTTCTATGCTAGATGATAGATAGGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTCTGCTGCAAACTCATATTTCTATGCTAGATGATAGATAGGTCT  500

seq1  CAAATGTGTATTTCATTCATCACACCTAATTCATGCAAAGAGTCTCCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGTATTTCATTCATCACACCTAATTCATGCAAAGAGTCTCCTGC  550

seq1  CCTGGGGACTCTTCTGCTTCTTAATGAATTC  581
      |||||||||||||||||||||||||||||||
seq2  CCTGGGGACTCTTCTGCTTCTTAATGAATTC  581