BAC Information

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BAC

Clone NameB6Ng01-014L24
Chromosome5 (Build37)
Map Location 24,910,798 - 25,055,194
singlet/doubletdoublet
Overlap geneMll3, Gm443
Upstream geneAbcb8, Accn3, Cdk5, Slc4a2, Fastk, Tmub1, Centg3, Gbx1, Asb10, 4931409K22Rik, Abcf2, LOC100042348, Smarcd3, 1700022A21Rik, Nub1, 2810046M22Rik, Crygn, Rheb, Prkag2, Galntl5, E130116L18Rik, Galnt11
Downstream geneXrcc2, LOC435835, Actr3b
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014L24.bB6Ng01-014L24.g
ACCDH849205DH849206
length1,120958
definitionDH849205|Mus musculus domesticus DNA, BAC clone: B6Ng01-014L24, 5' end.DH849206|Mus musculus domesticus DNA, BAC clone: B6Ng01-014L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,910,798 - 24,911,941)(25,054,236 - 25,055,194)
sequence
gaattctccgttggacaacacttggcctaccatcaaccatcagttcaact
acagcaactgactcaattcccactagaaccacattctgtgaatcaccaca
ctgttgcagtaagtaaaccacttgaagcaaagacctgaatttcacaccca
ctgataaaaggcctggcctaaaatgctccctatgttttcaccaggctctt
taaagcttttctttctttcaactgtcaaatacctatggcaatcaaatgct
tagtcaaacaaacttatgacacattttgtaagtgtcctgcttgcatgatc
ctacttatttctagaatttaccactgaataagcaccaagtataaatgctt
ccagaatcaaatggaagctgttacagaagagaggtccctacctgtggaat
caaataaggcttggacatcaatggcatctggaaggccaaccagactgagt
tcatcccataacttgcccgcctggtcctcacaggctgtctgggtgcttac
acttacacaagaaacggcactctgctggggaggtcgttctctaaaaacaa
aattaagaaagataaaaactgtaaaaggtaactaaaaaaatcattttatt
ttataataatgagtacaaagtatgtcaaataagctttaattactaggtta
cagccacaaaaatttcaagaattcatctgttcttgttattcacaatatta
aagtgggtgttacattattttatgtaagcaagagtttaaagggctctctc
aatcataggaaatataacaattatagttataaattcatttttccattgaa
aactaactcattctatccaggaaccatgttttaacaaatacaatgaaaat
ttttttcagtttacatataagcatatgaggacattttacatgcattatct
taacacaaagctgcagtaacaaacgtacagactatttcccagaaaatgag
agcattgagtgtaacaggagaaaaggatgtgtgaactgtagctttctcat
gatctgatgtgtcagcagctggtcatgatgatgctggagtattctcaaga
ctgaacctccctaagtaaaagaaaacagccttaaggccatgggaataaga
agatgttataaagagataaa
gaattcagggctagcctaggctaagtagcaagttcaagagcaacctgggt
gtgatgctttgtctatgctcatcccaggaagtagcattattagaaggagt
ggccctgttggagtaggtgtgtcactgtgggtgtggcctttaagactctt
atccaatacttggaagccagtattctgctggcagcttctgatgatgatgt
agaactctcagctcctcctgtaccatgcctgcctggatgctgccatgttc
caccttgatgataatgggctgaacctctgaacctgtaagccagcccctat
taaatgttgtccttatgagagttgccttggtcatggtgtctcttcatagc
agtaaaaccctaactaagacactgggttacctgacactgtttctaaaccc
tatgcttattttttgaacctggtacaaactgcacagagagatggttggca
catcatctgtacagaatattttatgtctgtctagaccatactggagagcc
aggactgtgaagcagaggaagggagtgtggaactcactacggggatcaca
tgggtagcaggccgtggcatgggataggactggttccaagcctttctctt
tggtttgtatatgacttattccttcatgtatctgcaataccatctctctg
tgtccatctttgtgcccaaatttaccattctttaataagataggagtcct
attaggtggggtaaacctggatgaccttcagcttcactctattacctcag
tagaggatgtccttcagacaggcactagcccagcatgccagcacttcttt
attccagcactcagaagacagaccttgtaagccagcttctttcccaaagg
agctccctcaagtgcttatggtctttatcacagctaaaggagcaaacttg
acagctgagtttgatcctcgaaccctgtaagagtggaaagagaaaagaaa
cggcacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_24910798_24911941
seq2: B6Ng01-014L24.b_43_1162

seq1  GAATTCTCCGTTGGACAACACTTGGCCTACCATCAACCATCAGTTCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTTGGACAACACTTGGCCTACCATCAACCATCAGTTCAACT  50

seq1  ACAGCAACTGACTCAATTCCCACTAGAACCACATTCTGTGAATCACCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAACTGACTCAATTCCCACTAGAACCACATTCTGTGAATCACCACA  100

seq1  CTGTTGCAGTAAGTAAACCACTTGAAGCAAAGACCTGAATTTCACACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCAGTAAGTAAACCACTTGAAGCAAAGACCTGAATTTCACACCCA  150

seq1  CTGATAAAAGGCCTGGCCTAAAATGCTCCCTATGTTTTCACCAGGCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAAAGGCCTGGCCTAAAATGCTCCCTATGTTTTCACCAGGCTCTT  200

seq1  TAAAGCTTTTCTTTCTTTCAACTGTCAAATACCTATGGCAATCAAATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTTTCTTTCTTTCAACTGTCAAATACCTATGGCAATCAAATGCT  250

seq1  TAGTCAAACAAACTTATGACACATTTTGTAAGTGTCCTGCTTGCATGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAAACAAACTTATGACACATTTTGTAAGTGTCCTGCTTGCATGATC  300

seq1  CTACTTATTTCTAGAATTTACCACTGAATAAGCACCAAGTATAAATGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTATTTCTAGAATTTACCACTGAATAAGCACCAAGTATAAATGCTT  350

seq1  CCAGAATCAAATGGAAGCTGTTACAGAAGAGAGGTCCCTACCTGTGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATCAAATGGAAGCTGTTACAGAAGAGAGGTCCCTACCTGTGGAAT  400

seq1  CAAATAAGGCTTGGACATCAATGGCATCTGGAAGGCCAACCAGACTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAGGCTTGGACATCAATGGCATCTGGAAGGCCAACCAGACTGAGT  450

seq1  TCATCCCATAACTTGCCCGCCTGGTCCTCACAGGCTGTCTGGGTGCTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCATAACTTGCCCGCCTGGTCCTCACAGGCTGTCTGGGTGCTTAC  500

seq1  ACTTACACAAGAAACGGCACTCTGCTGGGGAGGTCGTTCTCTAAAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACACAAGAAACGGCACTCTGCTGGGGAGGTCGTTCTCTAAAAACAA  550

seq1  AATTAAGAAAGATAAAAACTGTAAAAGGTAACTAAAAAAATCATTTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAAAGATAAAAACTGTAAAAGGTAACTAAAAAAATCATTTTATT  600

seq1  TTATAATAATGAGTACAAAGTATGTCAAATAAGCTTTAATTACTAGGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATAATGAGTACAAAGTATGTCAAATAAGCTTTAATTACTAGGTTA  650

seq1  CAGCCACAAAAATTTCAAGAATTCATCTGTTCTTGTTATTCACAATATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACAAAAATTTCAAGAATTCATCTGTTCTTGTTATTCACAATATTA  700

seq1  AAGTGGGTGTTACATTATTTTATGTAAGCAAGAGTTTAAAGGGCTCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGTGTTACATTATTTTATGTAAGCAAGAGTTTAAAGGGCTCTCTC  750

seq1  AATCATAGGAAATATAACAATTATAGTTATAAATTCATTTTTCCATTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATAGGAAATATAACAATTATAGTTATAAATTCATTTTTCCATTGAA  800

seq1  AACTAACTCATTCTATCCAGGAACCATGTTTTAACAAATACAATGAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACTCATTCTATCCAGGAACCATGTTTTAACAAATACAATGAAAAT  850

seq1  TTTTTTCAGTTTTACATATAAAGCATATGAGGACATTTTAACATGCATTA  900
      ||||||||| ||||||||| ||||||||||||||||||| ||||||||||
seq2  TTTTTTCAG-TTTACATAT-AAGCATATGAGGACATTTT-ACATGCATTA  897

seq1  TCTTAACACAAAGCTGGCAGGTAACCAAACGTACAGACTATTTCCCAGGA  950
      ||||||||||||||| ||| |||| |||||||||||||||||||||||  
seq2  TCTTAACACAAAGCT-GCA-GTAA-CAAACGTACAGACTATTTCCCAG--  942

seq1  AAAATGAAGAGCCATTTGAGTGTAAACAGGGAGGAAAAAAGGGAATGTGT  1000
      |||||| |||||   ||||||||||      |||| ||||||  ||||||
seq2  AAAATG-AGAGC--ATTGAGTGTAA-----CAGGAGAAAAGG--ATGTGT  982

seq1  GAACTGTAGCTTTCTCATGATCCTGATGTGTCAGCAGCTGGTCATGAATG  1050
      ||||||||||||||||||||| |||||||||||||||||||||||| |||
seq2  GAACTGTAGCTTTCTCATGAT-CTGATGTGTCAGCAGCTGGTCATG-ATG  1030

seq1  ATGCT-GAGTAATCTCAAGACTGCACCTCACTAAGTAAAAGGAAAACAGG  1099
      ||||| ||||| ||||||||||| ||||| |||||||||| |||||||| 
seq2  ATGCTGGAGTATTCTCAAGACTGAACCTCCCTAAGTAAAA-GAAAACAG-  1078

seq1  CCCTAGAGGCATGGGGAATAAGAAAGATAGTATATAAGAGATAAA  1144
       |||  ||||   ||||||||| |||||  |||| ||||||||||
seq2  -CCTTAAGGCCATGGGAATAAG-AAGATGTTATA-AAGAGATAAA  1120

seq1: chr5_25054236_25055194
seq2: B6Ng01-014L24.g_69_1026 (reverse)

seq1  GTGTGCAGTTTCTTTTCTCTTTCCACCTTTACATGGGTTCTGGGGATCAA  50
      |||||| |||||||||||||||||||  ||||| |||||| | |||||||
seq2  GTGTGCCGTTTCTTTTCTCTTTCCACTCTTACA-GGGTTC-GAGGATCAA  48

seq1  ACTCAGCTGTCAAGTTTGCTTCCTTTTGCTGTGATAAAGACCATAAGCAA  100
      ||||||||||||||||||| |||||| ||||||||||||||||||||| |
seq2  ACTCAGCTGTCAAGTTTGC-TCCTTTAGCTGTGATAAAGACCATAAGC-A  96

seq1  CTTGA-GGAGCTCC-TTGGGAAAGAAGCTGGCTTAC-AGGTCTGTCTTCT  147
      ||||| |||||||| ||||||||||||||||||||| |||||||||||||
seq2  CTTGAGGGAGCTCCTTTGGGAAAGAAGCTGGCTTACAAGGTCTGTCTTCT  146

seq1  GAGTGCTGGGATTAAAGAGGTGCTGGCATGCTGGGCTAGTGCCTGTCTGA  197
      ||||||| ||| |||||| |||||||||||||||||||||||||||||||
seq2  GAGTGCT-GGAATAAAGAAGTGCTGGCATGCTGGGCTAGTGCCTGTCTGA  195

seq1  AGGACATCCTCTACTGAGGTAATAGAGTGAAGCTG-AGGTCATCAGGGTT  246
      ||||||||||||||||||||||||||||||||||| ||||||||  ||||
seq2  AGGACATCCTCTACTGAGGTAATAGAGTGAAGCTGAAGGTCATCCAGGTT  245

seq1  TACCCCACCTATTAGGACTCCTATCTTATTAAAGAATGGTAAATTTGGGC  296
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TACCCCACCTAATAGGACTCCTATCTTATTAAAGAATGGTAAATTTGGGC  295

seq1  ACAAAGATGGACACAGAGAGATGGTATTGCAGATACATGAAGGAATAAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGATGGACACAGAGAGATGGTATTGCAGATACATGAAGGAATAAGT  345

seq1  CATATACAAACCAAAGAGAAAGGCTTGGAACCAGTCCTATCCCATGCCAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACAAACCAAAGAGAAAGGCTTGGAACCAGTCCTATCCCATGCCAC  395

seq1  GGCCTGCTACCCATGTGATCCCCGTAGTGAGTTCCACACTCCCTTCCTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCTACCCATGTGATCCCCGTAGTGAGTTCCACACTCCCTTCCTCT  445

seq1  GCTTCACAGTCCTGGCTCTCCAGTATGGTCTAGACAGACATAAAATATTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCACAGTCCTGGCTCTCCAGTATGGTCTAGACAGACATAAAATATTC  495

seq1  TGTACAGATGATGTGCCAACCATCTCTCTGTGCAGTTTGTACCAGGTTCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGATGATGTGCCAACCATCTCTCTGTGCAGTTTGTACCAGGTTCA  545

seq1  AAAAATAAGCATAGGGTTTAGAAACAGTGTCAGGTAACCCAGTGTCTTAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGCATAGGGTTTAGAAACAGTGTCAGGTAACCCAGTGTCTTAG  595

seq1  TTAGGGTTTTACTGCTATGAAGAGACACCATGACCAAGGCAACTCTCATA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTTTTACTGCTATGAAGAGACACCATGACCAAGGCAACTCTCATA  645

seq1  AGGACAACATTTAATAGGGGCTGGCTTACAGGTTCAGAGGTTCAGCCCAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAACATTTAATAGGGGCTGGCTTACAGGTTCAGAGGTTCAGCCCAT  695

seq1  TATCATCAAGGTGGAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCAAGGTGGAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGG  745

seq1  AGCTGAGAGTTCTACATCATCATCAGAAGCTGCCAGCAGAATACTGGCTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGAGTTCTACATCATCATCAGAAGCTGCCAGCAGAATACTGGCTT  795

seq1  CCAAGTATTGGATAAGAGTCTTAAAGGCCACACCCACAGTGACACACCTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTATTGGATAAGAGTCTTAAAGGCCACACCCACAGTGACACACCTA  845

seq1  CTCCAACAGGGCCACTCCTTCTAATAATGCTACTTCCTGGGATGAGCATA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACAGGGCCACTCCTTCTAATAATGCTACTTCCTGGGATGAGCATA  895

seq1  GACAAAGCATCACACCCAGGTTGCTCTTGAACTTGCTACTTAGCCTAGGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGCATCACACCCAGGTTGCTCTTGAACTTGCTACTTAGCCTAGGC  945

seq1  TAGCCCTGAATTC  959
      |||||||||||||
seq2  TAGCCCTGAATTC  958