BAC Information

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BAC

Clone NameB6Ng01-016G03
Chromosome5 (Build37)
Map Location 59,920,051 - 60,094,260
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041396, LOC666499, EG625870, LOC100041425
Downstream geneLOC546866, Cbfa2t2-ps1, LOC100041498
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016G03.bB6Ng01-016G03.g
ACCDH850358DH850359
length326555
definitionDH850358|Mus musculus domesticus DNA, BAC clone: B6Ng01-016G03, 5' end.DH850359|Mus musculus domesticus DNA, BAC clone: B6Ng01-016G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,093,936 - 60,094,260)(59,920,051 - 59,920,611)
sequence
acttatatagaaagtgcctaaactgaaaatacattaacagggaattcctg
atcaaaactatcaaacaaacacaaacaaacaaacaaacatacaaaacaaa
acaggtaataacataacgaagtgatctcccaaggtcactattctagttac
ttttgtaacttgaaacaaacaacaaactagaggcatatatgaagggaaag
tattaagaagttgagtctagtacaggggaatgccagggtcaggaagtggg
agtgggtgggttggggatcagagcagggggagggtataggggactttcag
gataggatttggaaatgtaaatatag
aacatggcgtagattcagagctgagttttttctataaaaatttcagtata
gtgtgcaaagatatatatctgagcaaacagagagacccatggctataagt
aaacagaattttgtagatgaaaacattgactacagtttatatccaattat
catctcatatgaaataaaagcttagacagtacagtggtctttcttaaaag
tccagatggagaaatgaggcaaagattctgcactatgaaagatgattaaa
caaatacagattatcgctgatgtcaatttcctataaatactgattttcat
tgtaaagtatttatatttttcattaatttatttgcttattcactttagat
cccagctccctccctcctctactcccagtcatacctacattatgaggtat
gtaccaacttagcagagaagtagaagaccctaccttgggatatctagtcc
cagcaggaataagcacattgtctctcgctgaggcaaagcaaacagtaaag
ataggggaagaggatccagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_60093936_60094260
seq2: B6Ng01-016G03.b_51_376 (reverse)

seq1  CTATATTTACATTT-CAAATCCTATCCTGAAAGTCCCCTATACCCTCCCC  49
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTATATTTACATTTCCAAATCCTATCCTGAAAGTCCCCTATACCCTCCCC  50

seq1  CTGCTCTGATCCCCAACCCACCCACTCCCACTTCCTGACCCTGGCATTCC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTGATCCCCAACCCACCCACTCCCACTTCCTGACCCTGGCATTCC  100

seq1  CCTGTACTAGACTCAACTTCTTAATACTTTCCCTTCATATATGCCTCTAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTAGACTCAACTTCTTAATACTTTCCCTTCATATATGCCTCTAG  150

seq1  TTTGTTGTTTGTTTCAAGTTACAAAAGTAACTAGAATAGTGACCTTGGGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTTGTTTCAAGTTACAAAAGTAACTAGAATAGTGACCTTGGGA  200

seq1  GATCACTTCGTTATGTTATTACCTGTTTTGTTTTGTATGTTTGTTTGTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTTCGTTATGTTATTACCTGTTTTGTTTTGTATGTTTGTTTGTTT  250

seq1  GTTTGTGTTTGTTTGATAGTTTTGATCAGGAATTCCCTGTTAATGTATTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTTTGTTTGATAGTTTTGATCAGGAATTCCCTGTTAATGTATTT  300

seq1  TCAGTTTAGGCACTTTCTATATAAGT  325
      ||||||||||||||||||||||||||
seq2  TCAGTTTAGGCACTTTCTATATAAGT  326

seq1: chr5_59920051_59920611
seq2: B6Ng01-016G03.g_67_627

seq1  GAATTCAACATGGCGTAGATTCAGAGCTGAGTTTTTTCTATAAAAATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATGGCGTAGATTCAGAGCTGAGTTTTTTCTATAAAAATTTC  50

seq1  AGTATAGTGTGCAAAGATATATATCTGAGCAAACAGAGAGACCCATGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGTGTGCAAAGATATATATCTGAGCAAACAGAGAGACCCATGGCT  100

seq1  ATAAGTAAACAGAATTTTGTAGATGAAAACATTGACTACAGTTTATATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAAACAGAATTTTGTAGATGAAAACATTGACTACAGTTTATATCC  150

seq1  AATTATCATCTCATATGAAATAAAAGCTTAGACAGTACAGTGGTCTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCATCTCATATGAAATAAAAGCTTAGACAGTACAGTGGTCTTTCT  200

seq1  TAAAAGTCCAGATGGAGAAATGAGGCAAAGATTCTGCACTATGAAAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTCCAGATGGAGAAATGAGGCAAAGATTCTGCACTATGAAAGATG  250

seq1  ATTAAACAAATACAGATTATCGCTGATGTCAATTTCCTATAAATACTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACAAATACAGATTATCGCTGATGTCAATTTCCTATAAATACTGAT  300

seq1  TTTCATTGTAAAGTATTTATATTTTTCATTAATTTATTTGCTTATTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGTAAAGTATTTATATTTTTCATTAATTTATTTGCTTATTCACT  350

seq1  TTAGATCCCAGCTCCCTCCCTCCTCTACTCCCAGTCATACCTACATTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATCCCAGCTCCCTCCCTCCTCTACTCCCAGTCATACCTACATTATG  400

seq1  AGGTATGTACCAACTTAGCAGAGAAGTAGAAGACCCTACCTTGGGATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGTACCAACTTAGCAGAGAAGTAGAAGACCCTACCTTGGGATATC  450

seq1  TAGTCCCAGCAGGAATAAGCACATTGTCTCTCGCTGAGGCAAAGCAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCAGCAGGAATAAGCACATTGTCTCTCGCTGAGGCAAAGCAAACA  500

seq1  GTAAAGATAGGGGAAGAGGATCCAGTGTGTGTGTGTGTGTGTGTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGATAGGGGAAGAGGATCCAGTGTGTGTGTGTGTGTGTGTGTGTGT  550

seq1  GTGTGTGTGTG  561
      |||||||||||
seq2  GTGTGTGTGTG  561