BAC Information

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BAC

Clone NameB6Ng01-016I01
Chromosome5 (Build37)
Map Location 37,836,801 - 37,837,373
singlet/doubletsinglet
Overlap genenone
Upstream geneTbc1d14, D5Ertd579e, LOC100040278, LOC100040825, Cno, Mrfap1, Man2b2, Ppp2r2c, Wfs1, Jakmip1, EG330070, Gm1043, LOC100040936, Crmp1, Evc, Evc2, LOC100040355
Downstream geneLOC100040988, Stk32b, Cytl1, Msx1, Stx18, Nsg1, LOC100040397, Zfp509, Lyar, Tmem128, Otop1, Drd5, 4930487D11Rik, Slc2a9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016I01.bB6Ng01-016I01.g
ACCDH850446DH850447
length233567
definitionDH850446|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I01, 5' end.DH850447|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agtttttggggtgggggtgggggaatcaatagttcctaggaaactggaat
tgttgagggtatgggaggtatgtagtatgtgtgcagaaaaaatgttcatt
atattaagtcagtattacctcaatacacaaaaaaggcaaagagacaacaa
agaaaactacagactaatttccctgatgaaagtaattgaaaattctcaat
ttggcaaaccaacacattaaaattatacataat
tttcagtgtgttgtcagtgtcctgtttggggtaaatggtgtttctgtgtc
tcctcaggcagatctcacacagaaaaagggataatgtatttaatctgatt
gctcttctgccacagctgggttgaagtcattcactctgggaacggaggtt
gtatgagaaagaatgaaaaacacatttgtaacttgggcctcatggaaaag
tggctctgaagagggtcagtccccaataacattgaagagaaaaagtcctg
agaaacgcaggggaagtggggagtgagttggttaggcggtgcccaaagca
aatacacacagccagtttgtgttgtgttcctctatctccttcattaaaag
cctgctgcttgccccttaccaagcaagttctgtgaaagctacagaaaatg
ttcatggaagcccacacggagtagctatacctggcatgaattagtgttgc
cacgagtcccaggggccttggaagaagtggtattaacctttaacactgat
gtgataacctacacggttggaagctgagattcatcccagtggagaggaag
actggaaggtggtgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_37836801_37837373
seq2: B6Ng01-016I01.g_64_636

seq1  GAATTCTTTCAGTGTGTTGTCAGTGTCCTGTTTGGGGTAAATGGTGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGTGTGTTGTCAGTGTCCTGTTTGGGGTAAATGGTGTTTC  50

seq1  TGTGTCTCCTCAGGCAGATCTCACACAGAAAAAGGGATAATGTATTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCCTCAGGCAGATCTCACACAGAAAAAGGGATAATGTATTTAAT  100

seq1  CTGATTGCTCTTCTGCCACAGCTGGGTTGAAGTCATTCACTCTGGGAACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGCTCTTCTGCCACAGCTGGGTTGAAGTCATTCACTCTGGGAACG  150

seq1  GAGGTTGTATGAGAAAGAATGAAAAACACATTTGTAACTTGGGCCTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGTATGAGAAAGAATGAAAAACACATTTGTAACTTGGGCCTCATG  200

seq1  GAAAAGTGGCTCTGAAGAGGGTCAGTCCCCAATAACATTGAAGAGAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTGGCTCTGAAGAGGGTCAGTCCCCAATAACATTGAAGAGAAAAA  250

seq1  GTCCTGAGAAACGCAGGGGAAGTGGGGAGTGAGTTGGTTAGGCGGTGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAGAAACGCAGGGGAAGTGGGGAGTGAGTTGGTTAGGCGGTGCCC  300

seq1  AAAGCAAATACACACAGCCAGTTTGTGTTGTGTTCCTCTATCTCCTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAATACACACAGCCAGTTTGTGTTGTGTTCCTCTATCTCCTTCAT  350

seq1  TAAAAGCCTGCTGCTTGCCCCTTACCAAGCAAGTTCTGTGAAAGCTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCCTGCTGCTTGCCCCTTACCAAGCAAGTTCTGTGAAAGCTACAG  400

seq1  AAAATGTTCATGGAAGCCCACACGGAGTAGCTATACCTGGCATGAATTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTCATGGAAGCCCACACGGAGTAGCTATACCTGGCATGAATTAG  450

seq1  TGTTGCCACGAGTCCCAGGGGCCTTGGAAGAAGTGGTATTAACCTTTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCACGAGTCCCAGGGGCCTTGGAAGAAGTGGTATTAACCTTTAAC  500

seq1  ACTGATGTGATAACCTACACGGTTGGAAGCTGAGATTCATCCCAGTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGTGATAACCTACACGGTTGGAAGCTGAGATTCATCCCAGTGGAG  550

seq1  AGGAAGACTGGAAGGTGGTGAGG  573
      |||||||||||||||||||||||
seq2  AGGAAGACTGGAAGGTGGTGAGG  573