BAC Information

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BAC

Clone NameB6Ng01-017A22
Chromosome5 (Build37)
Map Location 48,832,326 - 48,832,871
singlet/doubletsinglet
Overlap geneKcnip4
Upstream geneLOC100040865, LOC100040876, Slit2, 4933428G09Rik
Downstream geneLOC100041668, LOC100041659
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017A22.bB6Ng01-017A22.g
ACCDH850847DH850848
length7551,163
definitionDH850847|Mus musculus domesticus DNA, BAC clone: B6Ng01-017A22, 5' end.DH850848|Mus musculus domesticus DNA, BAC clone: B6Ng01-017A22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatggtaaccaagctacaagtgtgagagacttttacttttttta
gtaagagactaaaggaagcagataaatctccttagaacagggaaatgaaa
tagaaagttctacatggaaggggtggactgcaccagtaggatcaagtgag
agagaggaaggaggttgtaagagggaatgcagagaagatggctaaaattg
ttatttgataggtagtacagaaacttaagacaggtaatacactaaatgat
atacatatgtgaaggtgatctaaatgaaatcaccaaataatgggggtaac
agagtcccatatgactacatcttgtcaccaattgcaacttccagtactgg
gaatgggttacatcagttgttggccaaactggacccataggaatccccca
acagccaggctgttgccaagactataggttgctctctataaaatgacatc
agggctccatttctgaagacaacacttatacaactcattttacatggaga
tggtgagtctggtgcctacatagagccttcagcacctacataatagcatc
tttgtcatgggaacagactctgtacacaaaaaagagaaagtaagccagct
gcaatccctttatatgtaatggtgtagtgccatcaaggtggcacagaact
agtgggcataaccacctagtaacagatttgacttagagcacagtccaggg
gtatggttccattgtatatttatttatttgtttgtttctggggggttatg
attgc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggatttcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcgagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctccaaa
tggaggagctgaagaaagtacccaaggagctaaagggatcttcatcctta
tagtgaccacattatgaactaaccagtacccttggagctcttgactctag
ctgcatatgtatcaaagatggcttagtcggccatccttgaaagaaagcca
tgtaccgctgacttgtgtgctcggttcagggtatcgctgtggctcaatgg
gggtaacttgcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_48832326_48832871
seq2: B6Ng01-017A22.b_255_801

seq1  TAGGTAGTACAGAAACTTAAGACAGGTAATACACTAAATGATATACATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGTACAGAAACTTAAGACAGGTAATACACTAAATGATATACATAT  50

seq1  GTGAAGGTGATCTAAATGAAATCACCAAATAATGGGGGTAACAGAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGTGATCTAAATGAAATCACCAAATAATGGGGGTAACAGAGTCCC  100

seq1  ATATGACTACATCTTGTCACCAATTGCAACTTCCAGTACTGGGAATGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACTACATCTTGTCACCAATTGCAACTTCCAGTACTGGGAATGGGT  150

seq1  TACATCAGTTGTTGGCCAAACTGGACCCATAGGAATCCCCCAACAGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAGTTGTTGGCCAAACTGGACCCATAGGAATCCCCCAACAGCCAG  200

seq1  GCTGTTGCCAAGACTATAGGTTGCTCTCTATAAAATGACATCAGGGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGCCAAGACTATAGGTTGCTCTCTATAAAATGACATCAGGGCTCC  250

seq1  ATTTCTGAAGACAACACTTATACAACTCATTTTACATGGAGATGGTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAAGACAACACTTATACAACTCATTTTACATGGAGATGGTGAGT  300

seq1  CTGGTGCCTACATAGAGCCTTCAGCACCTACATAATAGCATCTTTGTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCCTACATAGAGCCTTCAGCACCTACATAATAGCATCTTTGTCAT  350

seq1  GGGAACAGACTCTGTACACAAAAAAGAGAAAGTAAGCCAGCTGCAATCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAGACTCTGTACACAAAAAAGAGAAAGTAAGCCAGCTGCAATCCC  400

seq1  TTTATATGTAATGGTGTAGTGCCATCAAGGTGGCACAGAACTAGTGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGTAATGGTGTAGTGCCATCAAGGTGGCACAGAACTAGTGGGCA  450

seq1  TAACCACCTAGTAACAGATTTGACTTAGAGCACAGTCCAGGGGTATGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACCTAGTAACAGATTTGACTTAGAGCACAGTCCAGGGGTATGGTT  500

seq1  CCATTGTATATTTATTTATTTGTTTGTTTCT-GGGGGTTATGATTGC  546
      ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCATTGTATATTTATTTATTTGTTTGTTTCTGGGGGGTTATGATTGC  547