BAC Information

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BAC

Clone NameB6Ng01-018A24
Chromosome5 (Build37)
Map Location 10,398,447 - 10,399,251
singlet/doubletsinglet
Overlap geneLOC100041395
Upstream gene9330182L06Rik, Grm3, LOC100042768, LOC625446, LOC435832, LOC381612
Downstream geneEG625586, LOC242809, LOC623849, LOC100041408, LOC667880, EG667888, EG667901, EG667907, LOC667916, LOC100041472, EG545728, LOC100042819, LOC667942, LOC667948, EG667949, Speer1-ps1, EG667956
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018A24.bB6Ng01-018A24.g
ACCDH851566DH851567
length9491,149
definitionDH851566|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A24, 5' end.DH851567|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggctgagaagcccctgaaaaaaat
gctcagcatccttaatcatcagggaaatgcaaatcaaaacagccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacac
cagatgctggcgaggatgtggagaaagaggagcactcctccattgttggt
gggattgcaagcttgtacaaccactctgaaaatcagtctggcggttcctc
agaaaattggacatagtactactggaggatcccgcaatacctctcctggg
catatatccagaagatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatatccagaagctggaaagaacccaga
tgcccttcaacagaggaatggatacaaaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttataaaattcctaggca
aatggatggacatggagggcatcatcctgagtgaggttaacacaatcaca
aaagacctcaaatgacatgtactcactgataagtgaatattagcccagaa
acttagtatacctaagatataagatacaatttttctttaattttaaaatg
aagatgttgaagcatataaaagactagataatttgacactataaaaagcc
gagtaacaatcaagaaacaagatcttggtcttgtgattcctgattcaaac
tgaagttctttaagtatgttgctgatcatttgtggtgtacagtgtgttga
gtaatatttccaaagtgccccaatatcgttggctgtaatttatttatcat
actctgaacttatcttttagggaagacttttcagcccagatgagaaattt
aatcaggagaaacccgaatgacctattcttctcttaagtaaggtcatcc
gaattctcacctgaggaatactgaatggcagagaaacacctgaaaaaata
tgcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcattccagtcagaatggctaagatcaaaaactcaggtgacaac
agatactggcgaggaacactcctccattgttggtgggattgcaagcttgt
acaaccactgtggaaatcagtctggcggttcctcagaaaattggacatag
tactaccggaggatcccgcaatacctctcctgggcatatatccagaagat
gtcccaaccggtaagaaggatacatgctccactatgttcatagcagcctt
gtttataatagccagtagctggaaaaaaacccagatgcccctcaacagag
gaatgcatacagaaaatgtggtacatttacacaatggaatactactcagc
tgttaaaaaaatgaatttatgaaattcctaggcaaatggatggacctgga
gggtatcatcctgagtgaggtaacccaatcacaaaggaactctcacaata
tgtaatcactgataagtggatattagcccagaaacttaggatacccaaga
tataagatacaacttgctaaacacatgaaattcaagaagaacatggacca
aactgtggacactttatccctttcttagaaatgggaacaaaacacccatg
gaaggagttacagagacaaaatttggagctgtgacgaaaggatggaccat
ctagtgattgccatatgcagggatccatcccataatcagcttccaaatgc
tgacaccattgcatacactagcaagattttgctgaaaggacccagatata
actgtctctgtgagaacttgcagagcctagcaaacacagaagtggatgct
cacagtcagctaatggatggatcacaggccccaatggaggagctatagaa
atcacccaggagctaagggaactgcaaccatatagtggacacattatgaa
ctaccagtacccggagctttgtcttagtgcatatgatcaaagatgcctaa
gcgccatcttgcaaaggaagtccaattgacatgcaacttatatgctcaga
taggccaacgcctaggcaaaatgggggatgtgatgtgtgtatagatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_10398447_10399251
seq2: B6Ng01-018A24.b_178_989

seq1  ATTCAGGTGACACCAGATGCTGGCGAGGATGTGGAGAAAGAGGAGCACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGTGACACCAGATGCTGGCGAGGATGTGGAGAAAGAGGAGCACTC  50

seq1  CTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGAAAATCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGAAAATCAGT  100

seq1  CTGGCGGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATCCCGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATCCCGCAA  150

seq1  TACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGAC  200

seq1  ACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATATCCAGAAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATATCCAGAAGCTG  250

seq1  GAAAGAACCCAGATGCCTTTCAACAGAGGAATGGATACAAAAAATGTGGT  300
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAAAGAACCCAGATGCCCTTCAACAGAGGAATGGATACAAAAAATGTGGT  300

seq1  ACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATA  350

seq1  AAATTCCTAGGCAAATGGATGGACATGGAGGGCATCATCCTGAGTGAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTAGGCAAATGGATGGACATGGAGGGCATCATCCTGAGTGAGGT  400

seq1  TAACACAATCACAAAAGAACTCAAATGACATGTACTCACTGATAAGTGAA  450
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAACACAATCACAAAAGACCTCAAATGACATGTACTCACTGATAAGTGAA  450

seq1  TATTAGCCCAGAAACTTAGTATACCTAAGATATAAGATACAA-TTTTCTT  499
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATTAGCCCAGAAACTTAGTATACCTAAGATATAAGATACAATTTTTCTT  500

seq1  TAATTTTAAAATGAAGATGTTGAAGCATAT-AAAGACTAGATAATTTGAC  548
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAATTTTAAAATGAAGATGTTGAAGCATATAAAAGACTAGATAATTTGAC  550

seq1  ACTATAAAAAGCCAAGTAACAATCAAGAAACAAGATCTTGGTCTTGTGAT  598
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACTATAAAAAGCCGAGTAACAATCAAGAAACAAGATCTTGGTCTTGTGAT  600

seq1  TCCTGATTCAAACTGTTGTTC-TTAAGTATGTTGCTGATCATTTGTGGTG  647
      |||||||||||||||  |||| ||||||||||||||||||||||||||||
seq2  TCCTGATTCAAACTGAAGTTCTTTAAGTATGTTGCTGATCATTTGTGGTG  650

seq1  TACAGTGTGTTGAGTAATATTTCCAAAGTGCCCCAATAGC-ATGGCTGTA  696
      |||||||||||||||||||||||||||||||||||||| |  ||||||||
seq2  TACAGTGTGTTGAGTAATATTTCCAAAGTGCCCCAATATCGTTGGCTGTA  700

seq1  AATTTTTTAACAAACTCTGAA-TTATC-TTTAAGGAAGACTTATCAGCCA  744
      | || |||| || |||||||| ||||| |||| ||||||||| |||||| 
seq2  ATTTATTTATCATACTCTGAACTTATCTTTTAGGGAAGACTTTTCAGCCC  750

seq1  AGATGAGAAAATTAATCAGGAGAAACCCAAAT-AACTATTCTTCTCTCAA  793
      |||||||||| ||||||||||||||||| ||| | |||||||||||| ||
seq2  AGATGAGAAATTTAATCAGGAGAAACCCGAATGACCTATTCTTCTCTTAA  800

seq1  GTAATGTCATCC  805
      |||| |||||||
seq2  GTAAGGTCATCC  812