BAC Information

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BAC

Clone NameB6Ng01-019D20
Chromosome5 (Build37)
Map Location 79,471,611 - 79,472,108
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039398, Mthfr-ps1, EG384187
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019D20.bB6Ng01-019D20.g
ACCDH852390DH852391
length4921,215
definitionDH852390|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D20, 5' end.DH852391|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taaaatatctgttaatattttggggggtcttaattgattctagatgactt
aacccacaggtgtcgcaatatttgggtttcaaggtgtgatttaagcttta
gcaatgtttcttttacaaaagtgggtaacctgttcagagaacagaagttt
agaattaagatatcatcttggaagatttttcctttcatgagtatgaagtg
tccctccctgtattcttcgtttaattttggttgaaagtctattttattag
aaatttgaatggctactctagcttgcttcttgggtccttttgcttgaaaa
cttttttccagccctttactctgaggtaacatttatctttaaagctgagg
tatgtttctcatatgcagcagaatgatggaatgatggatcctgttttcat
gtctatgctgttagtccgtgtctttttttgtttgcttgtgtttgtgtttg
tgtttgtgtttgtgtttgtgtttgtgttgtgttgtgttgtgt
gaattcctaattctgataaacaacttcagctaagtggctggatataaatt
aactcatactaatcagtggctttcctatactcaaaggataaaaaggctga
gaaagaaattagggaaacaacacccttcacaatagtcacaaaaaaacata
aaataccttggtgtgactctaaccaagaaagtgaaagatctgtatgacaa
gaacttcaagtctctgaagaaagaaatcaaagaagatcacagaagatgga
aagatctcccatgctcatggattagcaggattaatatagtgaaaatggct
atcttgccaaaagcaatctacagattcaatgcaatccctgtcaaaattcc
aattcaatttttcatagagttagaacaagtgatttgcaaattcatttgga
ataacaaaaatctcaagatagaaaaaactattctcaacaataaaagaaat
tctggggaaatcaccatcccttacctcaagccatattacagagcaatagt
gattaaaggacaaacaaaacaaaacaaaacaaaacaaaacaaaaacaaaa
acaaaactgcatgggattggtgacaggtatgtagatcaatggaatagaat
tgaagacctagaaatgaacatacatacctatggtcatttgatctttgcca
aaggagctaaaaccatccagtagaaaaaagacagcattttcaagaaatgg
tgctggctcagctggtggttagtatgtagaagaatgcaaattcattcatc
cttgtacaaagctcaattccaaatggatcaaggacctccacataaaacca
gagacagtgaaacttatagaggagaaagtggggaagaccctcaaacacat
gggcactgagagaaaaatcctgaacagaaaaccaatggcttatgctataa
gatcacaatagataatgtgacctcaaaagttttaacatggtctcactgtt
tgctctggctgtctatgaactctctgggttgatgcgaaggtcttactcat
gtagatccacctgcctcttactcagagtgctacctgaaagcatgcaacat
gaagcccagccctgtattctacaatgtgattttttttgggacagtccttg
tgtagcctgctgtctgaactcaatgaaacaaggctagctcaaactgaatc
ctgcctggccctatgctgataggcgtggctcaccactgccgaacacatgt
ggttattatatgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_79471611_79472108
seq2: B6Ng01-019D20.b_43_540 (reverse)

seq1  ACACAACACAACACAACACAAACACAAACACAAACACAAACACAAACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACACAACACAACACAAACACAAACACAAACACAAACACAAACACA  50

seq1  AACACAAGCAAACAAAAAAAGACACGGACTAACAGCATAGACATGAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAGCAAACAAAAAAAGACACGGACTAACAGCATAGACATGAAAAC  100

seq1  AGGATCCATCATTCCATCATTCTGCTGCATATGAGAAACATACCTCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCATCATTCCATCATTCTGCTGCATATGAGAAACATACCTCAGCT  150

seq1  TTAAAGATAAATGTTACCTCAGAGTAAAGGGCTGGAAAAAAGTTTTCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATAAATGTTACCTCAGAGTAAAGGGCTGGAAAAAAGTTTTCAAG  200

seq1  CAAAAGGACCCAAGAAGCAAGCTAGAGTAGCCATTCAAATTTCTAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGACCCAAGAAGCAAGCTAGAGTAGCCATTCAAATTTCTAATAAA  250

seq1  ATAGACTTTCAACCAAAATTAAACGAAGAATACAGGGAGGGACACTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTTTCAACCAAAATTAAACGAAGAATACAGGGAGGGACACTTCAT  300

seq1  ACTCATGAAAGGAAAAATCTTCCAAGATGATATCTTAATTCTAAACTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGAAAGGAAAAATCTTCCAAGATGATATCTTAATTCTAAACTTCT  350

seq1  GTTCTCTGAACAGGTTACCCACTTTTGTAAAAGAAACATTGCTAAAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTGAACAGGTTACCCACTTTTGTAAAAGAAACATTGCTAAAGCTT  400

seq1  AAATCACACCTTGAAACCCAAATATTGCGACACCTGTGGGTTAAGTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACACCTTGAAACCCAAATATTGCGACACCTGTGGGTTAAGTCATC  450

seq1  TAGAATCAATTAAGACCCCCCAAAATATTAACAGATATTTTAGAATTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCAATTAAGACCCCCCAAAATATTAACAGATATTTTAGAATTC  498