BAC Information

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BAC

Clone NameB6Ng01-019G13
Chromosome5 (Build37)
Map Location 115,934,778 - 116,110,460
singlet/doubletdoublet
Overlap geneSirt4, LOC638021, Pxn, Arbp, Gcn1l1, LOC100042199, Rab35, Ccdc64
Upstream geneBC057022, Trpv4, Gltp, Tchp, Git2, 4930515G01Rik, Ankrd13a, 1500011B03Rik, 2610524H06Rik, LOC664895, 4930519G04Rik, Oasl2, Oasl1, 2210016L21Rik, Tcf1, Sppl3, Acads, AA407659, 2410014A08Rik, Cabp1, Pop5, Rnf10, Coq5, Dynll1, Sfrs9, 2010003O18Rik, Triap1, Cox6a1, Msi1, Pla2g1b
Downstream geneLOC665032, Cit, Prkab1, LOC545798, Ccdc60, 4930562A09Rik, Hspb8, 1500001A10Rik, LOC433943, Gm1684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019G13.bB6Ng01-019G13.g
ACCDH852500DH852501
length563734
definitionDH852500|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G13, 5' end.DH852501|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,109,900 - 116,110,460)(115,934,778 - 115,935,511)
sequence
gaattcaaagtcatccttaggtacagtgccagttcacactagcctaggct
acctgacacctgtctcagtgttctttaagattaacacttgtattgtttgt
agattggtttggaaatggagtgttaacatttactagccttgaactcttgg
gcccagtagattctcttgcctcagcctcccaaacatagttcagtgctccc
acttaactaaaacaagtgcttgcttattaaagttttgacaattttctaaa
aattttactttggctgctttgcttatcaaagtgaggaccttgtttcattg
agaaacacagtttaaatataggttctctactacgtaagttgatagccagg
catggtggtgcacacctttgatccagcactcgggaggcagaggcaggcag
atatatgtgagtttagggccagcctgttctacacagtgagtttcaggaca
gccagggctgttacacagagaaaccctgtctcaaaaaagaaagaaagaga
tgaaaatgaaaccaaaacaaaagttggtttgatgtctggctttagttcag
ctcctgtgagctt
ctctcttaaagaaactctttcactagtagcacaggacaataatctgccac
tcaataggcttaggcggaagaatcacgagttcaaggccagtctgggtgac
ttagtgagacctcggactcaaaataatactgtaagagcactggggctata
gctcggtgtcagcgcgttagcccagccctgggtagccctgaattcacact
agcgggcatttctccatccaagacgctttttaaaatagactggttttttt
ttttttttaataatgtgtgtgttttaccttcatgcatacaggaggagctc
ctgacggccataaaagggcgtcagatcccctggaacttgagtgacaacct
gttgtgaactgccctgtgggtgctcgggatggaatctgagtccccctgca
agagtagcaatgctcttgtttgtttgttttggtgttttcgagacagggtt
tctctgtatagccctggctttcctggaactcactctgtagaccaggctgg
tctcagagatccacctgcctctgcctcccaagtgctgggattaaaggcgt
gctccaccaccacctggtgagaagcaatgctcttaaccagtgagccacct
cttcagctctcccaacccctccccaaaagaccctttctttgttttttgtt
ttttgtttttctgagacagggtgttaatgtatagtctgacactttttttt
ttttttttttttggttttcccgagacatggtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_116109900_116110460
seq2: B6Ng01-019G13.b_41_602 (reverse)

seq1  AGCTCACAGGAGCTGAACT-AAGCCAGACATCAAACCAACTTTTGTTTTG  49
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGCTCACAGGAGCTGAACTAAAGCCAGACATCAAACCAACTTTTGTTTTG  50

seq1  GTTTCCTTTTCTTCTCTTTCTTTCTTTTTTGAGACAGGGTTTCTCTGTGT  99
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTTTCATCTCTTTCTTTCTTTTTTGAGACAGGGTTTCTCTGTGT  100

seq1  AACAGCCCTGGCTGTCCTGAAACTCACTGTGTAGACCAGGCTGGCCCTAA  149
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AACAGCCCTGGCTGTCCTGAAACTCACTGTGTAGAACAGGCTGGCCCTAA  150

seq1  ACTCACATATATCTGCCTGCCTCTGCCTCCCGAGTGCTGGATCAAAGGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATATATCTGCCTGCCTCTGCCTCCCGAGTGCTGGATCAAAGGTG  200

seq1  TGCACCACCATGCCTGGCTATCAACTTACGTAGTAGAGAACCTATATTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCACCATGCCTGGCTATCAACTTACGTAGTAGAGAACCTATATTTA  250

seq1  AACTGTGTTTCTCAATGAAACAAGGTCCTCACTTTGATAAGCAAAGCAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGTTTCTCAATGAAACAAGGTCCTCACTTTGATAAGCAAAGCAGC  300

seq1  CAAAGTAAAATTTTTAGAAAATTGTCAAAACTTTAATAAGCAAGCACTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAAAATTTTTAGAAAATTGTCAAAACTTTAATAAGCAAGCACTTG  350

seq1  TTTTAGTTAAGTGGGAGCACTGAACTATGTTTGGGAGGCTGAGGCAAGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTAAGTGGGAGCACTGAACTATGTTTGGGAGGCTGAGGCAAGAG  400

seq1  AATCTACTGGGCCCAAGAGTTCAAGGCTAGTAAATGTTAACACTCCATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACTGGGCCCAAGAGTTCAAGGCTAGTAAATGTTAACACTCCATTT  450

seq1  CCAAACCAATCTACAAACAATACAAGTGTTAATCTTAAAGAACACTGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAATCTACAAACAATACAAGTGTTAATCTTAAAGAACACTGAGA  500

seq1  CAGGTGTCAGGTAGCCTAGGCTAGTGTGAACTGGCACTGTACCTAAGGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTCAGGTAGCCTAGGCTAGTGTGAACTGGCACTGTACCTAAGGAT  550

seq1  GACTTTGAATTC  561
      ||||||||||||
seq2  GACTTTGAATTC  562

seq1: chr5_115934778_115935511
seq2: B6Ng01-019G13.g_76_808

seq1  CTCTCTTAAAGAAACTCTTTCACTAGTAGCACAGGACAATAATCTGCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTAAAGAAACTCTTTCACTAGTAGCACAGGACAATAATCTGCCAC  50

seq1  TCAATAGGCTTAGGCGGAAGAATCACGAGTTCAAGGCCAGTCTGGGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGGCTTAGGCGGAAGAATCACGAGTTCAAGGCCAGTCTGGGTGAC  100

seq1  TTAGTGAGACCTCGGACTCAAAATAATACTGTAAGAGCACTGGGGCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGAGACCTCGGACTCAAAATAATACTGTAAGAGCACTGGGGCTATA  150

seq1  GCTCGGTGTCAGCGCGTTAGCCCAGCCCTGGGTAGCCCTGAATTCACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGGTGTCAGCGCGTTAGCCCAGCCCTGGGTAGCCCTGAATTCACACT  200

seq1  AGCGGGCATTTCTCCATCCAAGACGCTTTTTAAAATAGACTGGTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGGCATTTCTCCATCCAAGACGCTTTTTAAAATAGACTGGTTTTTTT  250

seq1  TTTTTTTTAATAATGTGTGTGTTTTACCTTCATGCATACAGGAGGAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAATAATGTGTGTGTTTTACCTTCATGCATACAGGAGGAGCTC  300

seq1  CTGACGGCCATAAAAGGGCGTCAGATCCCCTGGAACTTGAGTGACAACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGGCCATAAAAGGGCGTCAGATCCCCTGGAACTTGAGTGACAACCT  350

seq1  GTTGTGAACTGCCCTGTGGGTGCTCGGGATGGAATCTGAGTCCCCCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAACTGCCCTGTGGGTGCTCGGGATGGAATCTGAGTCCCCCTGCA  400

seq1  AGAGTAGCAATGCTCTTGTTTGTTTGTTTTGGTGTTTTCGAGACAGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGCAATGCTCTTGTTTGTTTGTTTTGGTGTTTTCGAGACAGGGTT  450

seq1  TCTCTGTATAGCCCTGGCTTTCCTGGAACTCACTCTGTAGACCAGGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTATAGCCCTGGCTTTCCTGGAACTCACTCTGTAGACCAGGCTGG  500

seq1  TCTCAGAGATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGT  550

seq1  GCTCCACCACCACCTGGTGAGAAGCAATGCTCTTAACCAGTGAGCCACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACCACCACCTGGTGAGAAGCAATGCTCTTAACCAGTGAGCCACCT  600

seq1  CTTCAGCTCTCCCAACCCCTCCCCAAAAGACCCTTTCTTTGTTTTTTG-T  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTTCAGCTCTCCCAACCCCTCCCCAAAAGACCCTTTCTTTGTTTTTTGTT  650

seq1  TTTTGTTTTTCTGAGACAGGGTGTTAATGTATAGTCTGACACTTTTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  TTTTGTTTTTCTGAGACAGGGTGTTAATGTATAGTCTGACAC---TTTTT  697

seq1  TTTTTTTTTTTTTTTGGTTTT-CCGAGACAGGGTTT  734
      ||||||||||||||||||||| |||||||| |||||
seq2  TTTTTTTTTTTTTTTGGTTTTCCCGAGACATGGTTT  733