BAC Information

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BAC

Clone NameB6Ng01-020B19
Chromosome5 (Build37)
Map Location 102,569,794 - 102,570,819
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041888, LOC100040902, Cycs-ps2, LOC100040920, Nkx6-1, Cds1, Wdfy3, EG666515, EG666527
Downstream geneLOC625780, Arhgap24, Mapk10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020B19.bB6Ng01-020B19.g
ACCDH853003DH853004
length1,030620
definitionDH853003|Mus musculus domesticus DNA, BAC clone: B6Ng01-020B19, 5' end.DH853004|Mus musculus domesticus DNA, BAC clone: B6Ng01-020B19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagtagacatatacagggccagcaacagagggccaccaacaga
gggctacccacagagggccaccaacaaaggaggctttactcaagtggcca
ttgtcatcctcatttctgtggcaggtcacatggctttagcggatttttat
aaactatgtttctctactgcctgttctgcattctctccaccaacagcaag
cacctcggcaggtcttgggtctctatccaggagggtgaccaatgccttcc
ttcattcttgggccatttatcatctggcctggattgggttgttgtacttt
tccaatgatattaatcacaggacacagtaacacagacacccattcccccc
acccccaaacaaaaggaaacaaaaaccaaatgcctaataggatgtcctgc
attccagatacactcctttttttttttttttttttttttttttttacttc
cattgaagagtccagtttctccctggtagtttggacaaatcaaactccgg
gaacatatttgctctcttcttatgttgactccagggagtcaggagcccaa
tgtggccagaaaaagtcttacatcactttttaatgagacatttcttttgc
ctcttggcagaaggattattccacccttgagaccaatttctgttccactt
tcaggtcatagttaccactgagcaaagtcaggacaggaactcaaataaga
atcagaatcagaaatcatggagggatactggcttccttgcagagctagct
tcctttccttagctagctctcgtagggagctcaaactctagcccagtcca
cctgcccaagacatggcatctcccaaagtgggttgggctctccttatatc
actgacaatcaacaaattctcataacccgggctctgggtcaaatgcatgc
aaataatcttttgattagacttcaggtggtgtcaggttggttaataaagc
taatgacgaatttcccatcatgggtggaaggaaactaaaaacttcatgaa
aattcacctttcaaggtttttggtttggtg

gaattctagaaatattcatatatgtataggtatatacataagtattccta
ggaagaagctgcttggtctgtatagtgttacttgtatgtgtgtttttagt
ggtgatcatttgatgatggataactaattggtgtggtcatcacagtagaa
gactgtttcgcttgtatttcagttgttctcagcattccttggttgtttta
gcagtttagggtatggattccatctcatgtatggattccaatacaaaatg
atcagttgggagactttaatgactgcttctacctcactaggggctgtggt
tctgtttaggttgtttatctgatctagattttatttagctgatcatatgt
atcaagaaatttactcctttattttaggttttccagtttggtgacgtaga
gattcttaaagtatgtacttaggattctctggatttccagtgtctgctgt
gatttttttttcatctctaatattattaatttagatttctttcctttaac
tggtatgattcagttaagggtctgtcaatcttgttgattattttcaatga
atcaattctttatttcattgattatttctattgttttttttatttgtgtc
tattttcattgatttttagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_102569794_102570819
seq2: B6Ng01-020B19.b_41_1066

seq1  GAATTCACAGTAGACATATACAGGGCCAGCAACAGAGGGCCACCAACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTAGACATATACAGGGCCAGCAACAGAGGGCCACCAACAGA  50

seq1  GGGCTACCCACAGAGGGCCACCAACAAAGGAGGCTTTACTCAAGTGGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTACCCACAGAGGGCCACCAACAAAGGAGGCTTTACTCAAGTGGCCA  100

seq1  TTGTCATCCTCATTTCTGTGGCAGGTCACATGGCTTTAGCGGATTTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATCCTCATTTCTGTGGCAGGTCACATGGCTTTAGCGGATTTTTAT  150

seq1  AAACTATGTTTCTCTACTGCCTGTTCTGCATTCTCTCCACCAACAGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATGTTTCTCTACTGCCTGTTCTGCATTCTCTCCACCAACAGCAAG  200

seq1  CACCTCGGCAGGTCTTGGGTCTCTATCCAGGAGGGTGACCAATGCCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCGGCAGGTCTTGGGTCTCTATCCAGGAGGGTGACCAATGCCTTCC  250

seq1  TTCATTCTTGGGCCATTTATCATCTGGCCTGGATTGGGTTGTTGTACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTTGGGCCATTTATCATCTGGCCTGGATTGGGTTGTTGTACTTT  300

seq1  TCCAATGATATTAATCACAGGACACAGTAACACAGACACCCATTCCCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGATATTAATCACAGGACACAGTAACACAGACACCCATTCCCCCC  350

seq1  ACCCCCAAACAAAAGGAAACAAAAACCAAATGCCTAATAGGATGTCCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAAACAAAAGGAAACAAAAACCAAATGCCTAATAGGATGTCCTGC  400

seq1  ATTCCAGATACACTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGATACACTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTC  450

seq1  CATTGAAGAGTCCAGTTTCTCCCTGGTAGTTTGGACAAATCAAACTCCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAGAGTCCAGTTTCTCCCTGGTAGTTTGGACAAATCAAACTCCGG  500

seq1  GAACATATTTGCTCTCTTCTTATGTTGACTCCAGGGAGTCAGGAGCCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATATTTGCTCTCTTCTTATGTTGACTCCAGGGAGTCAGGAGCCCAA  550

seq1  TGTGGCCAGAAGAAGTCTTACATCACTTTTTAATGAGACATTTCTTTTGC  600
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCAGAAAAAGTCTTACATCACTTTTTAATGAGACATTTCTTTTGC  600

seq1  CTCTTGGCAGAAGGATTATTCCACCCTTGAGACCAATTTCTGTTCCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGCAGAAGGATTATTCCACCCTTGAGACCAATTTCTGTTCCACTT  650

seq1  TCAGGTCATAGTTACCACTGAGCAAAGTCAGGACAGGAACTCAAATAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCATAGTTACCACTGAGCAAAGTCAGGACAGGAACTCAAATAAGA  700

seq1  ATCAGAATCAGAAATCATGGAGGGATACTGGCTTCCTTGCAGAGCTAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAATCAGAAATCATGGAGGGATACTGGCTTCCTTGCAGAGCTAGCT  750

seq1  TCC-TTCCTTAGCTAGCTCTCGTAGGTAGCTCAAACTCTAGCCCAGTCCA  799
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCCTTTCCTTAGCTAGCTCTCGTAGGGAGCTCAAACTCTAGCCCAGTCCA  800

seq1  CCTGCCCAAGACATGGCATCTCCCAAAGTGGGTTGGGCTCTCC-TATATC  848
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCTGCCCAAGACATGGCATCTCCCAAAGTGGGTTGGGCTCTCCTTATATC  850

seq1  AACTGACAATCAAGCAAATTCTCAT-AGCCAGGCTCATGGGTCAAATGCA  897
       |||||||||||| ||||||||||| | || ||||| |||||||||||||
seq2  -ACTGACAATCAA-CAAATTCTCATAACCCGGGCTC-TGGGTCAAATGCA  897

seq1  TGCAAATAATCTCTTGATTGAGAC-TCAGGCTGTGTCAGGTTGTTAATTA  946
      |||||||||||| |||||| |||| |||||  ||||||||||| | | ||
seq2  TGCAAATAATCTTTTGATT-AGACTTCAGGTGGTGTCAGGTTGGTTAATA  946

seq1  AAGCTAATGACGATATTCCAATCAT-GGTTGATGTAAACTAAAAACTTCA  995
      |||||||||||||  |||| ||||| ||| || | |||||||||||||||
seq2  AAGCTAATGACGAATTTCCCATCATGGGTGGAAGGAAACTAAAAACTTCA  996

seq1  TGAAAATTCTACCTTTCAGGTTTTTTGGTTT  1026
      ||||||||| |||||||| | ||||||||||
seq2  TGAAAATTC-ACCTTTCAAGGTTTTTGGTTT  1026


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