BAC Information

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BAC

Clone NameB6Ng01-020O20
Chromosome5 (Build37)
Map Location 8,833,883 - 8,834,933
singlet/doubletsinglet
Overlap geneAbcb1b
Upstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031
Downstream geneAbcb4, Crot, 4930420K17Rik, Dmtf1, LOC654361, 9330182L06Rik, Grm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020O20.bB6Ng01-020O20.g
ACCDH853587DH853588
length1,0451,132
definitionDH853587|Mus musculus domesticus DNA, BAC clone: B6Ng01-020O20, 5' end.DH853588|Mus musculus domesticus DNA, BAC clone: B6Ng01-020O20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgcttcacggccacgtctttcctgtgtttgcttaaaaatatga
gatagcacaaggaaaatcttcttttgctggtgaacatcattttaatgtac
atggcttttggcatttcggcctccttcatttattctgccctgactagagt
taactatttgtgtgcatggcttctttcctttgatattgataaatctctca
aactgccatatttccaaacttgaactttgacttctgcttcctcagcaggt
ttactccgtacctattctttctcttctctacccattgttcagactaaacc
cttaatgacttccctcactgttgagtcgtttacctctccaccaattgttc
atcagactcgtagatggtttcattacctccaccctcatcccagtgtggat
gtaacatgtatctaggaggggaaaggttgtatagtctctacagtttccaa
agactgtgcactgtgcctcacctatccccatcacaggtaatctacgacga
catccttacccaccacgtgatgtcttcccgactctgtaggtaactgcaca
aaggttgtagcagagaggttcaggggaatccggtaggacaaagagatcca
gaggaagtcatgaggcctgttctgtttaggctgccacagcctggtagctt
ttggtaactggtttagtgtgccttggcctagagtctctgcctgtaccaca
tcgtctttctttcaggcaatctccccctctttgtttgcatgtctgatcac
cttagataagcgtccctgtcccttctctacatctcccatcccttacttgt
ttgtccttctttgatatgtttatgtccagagtgttaattaccgtctagac
agtgtaaattcttctacttgtgccttctctctctagagctgaggctctat
ggtgacagcagcattgatattctttactgctttctacttggggttatgct
ggagagagtagaatttttttttttgtataatgaacaagtaaaacagtcta
cttatgtgtttgttattagcccgctctgtcattgaatataaattt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacattcttaatcatcagggaaatgcaaatcaaaacaaccctaaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatcccgcaatacctctcctagg
catatatccagaagatgttccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaaccttgaaagaacccaga
tgcccaacagaggaatggatacaggaaatgtggtacatttacacagtgaa
atactactcagctattaaaaagaacgaatttatgaaattcctagccaaat
ggatggacctggagggcatcatcctgaactcgcacaatatgtacttactg
ataagtggatattatttcagaaacttaggatacccaagatataacataca
atttgctaaatgcatgaaactcaagaagaacgaagaccaaagtgtggaca
ctttgccccttcttagaattggcaacaaaacacccatggaaggagttaca
gagacaaattttggatctgtgatgaaaggatggacactctagagactgcc
atattcagggatccatcccataatcagcctccaaatgctgacaccatttg
catacactagcaagattttgctgaaaggacccagatagagctgtctcttg
tgagactattgccgggcctggcaaacacagaagtggatgctcacagtcag
ctatggatggatcacaggcccccaatggaggagctagagaagtaccagga
gctaaagggatctacaatcctatagtggacacattatgactaaccagtat
cccgggagctcttgtctctagctgcatgtgtattccaagatggcttagtt
ggccttcactgaaggaaggccattggaactgcaaacttttatgccagtaa
gtgatgccaggccaaaatttaagttgggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_8833883_8834933
seq2: B6Ng01-020O20.b_47_1091

seq1  GAATTCCTGCTTCACGGCCACGTCTTTCCTGTGTTTGCTTAAAAATATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTTCACGGCCACGTCTTTCCTGTGTTTGCTTAAAAATATGA  50

seq1  GATAGCACAAGGAAAATCTTCTTTTGCTGGTGAACATCATTTTAATGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCACAAGGAAAATCTTCTTTTGCTGGTGAACATCATTTTAATGTAC  100

seq1  ATGGCTTTTGGCATTTCGGCCTCCTTCATTTATTCTGCCCTGACTAGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTTTGGCATTTCGGCCTCCTTCATTTATTCTGCCCTGACTAGAGT  150

seq1  TAACTATTTGTGTGCATGGCTTCTTTCCTTTGATATTGATAAATCTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATTTGTGTGCATGGCTTCTTTCCTTTGATATTGATAAATCTCTCA  200

seq1  AACTGCCATATTTCCAAACTTGAACTTTGACTTCTGCTTCCTCAGCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCATATTTCCAAACTTGAACTTTGACTTCTGCTTCCTCAGCAGGT  250

seq1  TTACTCCGTACCTATTCTTTCTCTTCTCTACCCATTGTTCAGACTAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCGTACCTATTCTTTCTCTTCTCTACCCATTGTTCAGACTAAACC  300

seq1  CTTAATGACTTCCCTCACTGTTGAGTCGTTTACCTCTCCACCAATTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGACTTCCCTCACTGTTGAGTCGTTTACCTCTCCACCAATTGTTC  350

seq1  ATCAGACTCGTAGATGGTTTCATTACCTCCACCCTCATCCCAGTGTGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACTCGTAGATGGTTTCATTACCTCCACCCTCATCCCAGTGTGGAT  400

seq1  GTAACATGTATCTAGGAGGGGAAAGGTTGTATAGTCTCTACAGTTTCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACATGTATCTAGGAGGGGAAAGGTTGTATAGTCTCTACAGTTTCCAA  450

seq1  AGACTGTGCACTGTGCCTCACCTATCCCCATCACAGGTAATCTACGACGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGCACTGTGCCTCACCTATCCCCATCACAGGTAATCTACGACGA  500

seq1  CATCCTTACCCACCACGTGATGTCTTCCCGACTCTGTAGGTAACTGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTACCCACCACGTGATGTCTTCCCGACTCTGTAGGTAACTGCACA  550

seq1  AAGGTTGTAGCAGAGAGGTTCAGGGGAATCCGGTAGGACAAAGAGATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGTAGCAGAGAGGTTCAGGGGAATCCGGTAGGACAAAGAGATCCA  600

seq1  GAGGAAGTCATGAGGCCTGTTCTGTTTAGGCTGCCACAGCCTGGTAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGTCATGAGGCCTGTTCTGTTTAGGCTGCCACAGCCTGGTAGCTT  650

seq1  TTGGTAACTGGTTTAGTGTGCCTTGGCCTAGAGTCTCTGCCTGTACCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAACTGGTTTAGTGTGCCTTGGCCTAGAGTCTCTGCCTGTACCACA  700

seq1  TCGTCTTTCTTTCAGGCAATCTCCCCCTCTTTGTTTGCATGTCTGATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTTTCTTTCAGGCAATCTCCCCCTCTTTGTTTGCATGTCTGATCAC  750

seq1  CTTAGATAAGCGTCCCTGTCCCTTCTCTACATCTCCCATCCCTTACTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATAAGCGTCCCTGTCCCTTCTCTACATCTCCCATCCCTTACTTGT  800

seq1  TTGTCCTTCTTTGATATGTTTATGTCCAGAGTGTTAATTACCGTCTAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTTCTTTGATATGTTTATGTCCAGAGTGTTAATTACCGTCTAGAC  850

seq1  AGTGTAAATTCTTCTACTTGTGCCTTCTCTCTCTAGAGCTGAGGCTCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAAATTCTTCTACTTGTGCCTTCTCTCTCTAGAGCTGAGGCTCTAT  900

seq1  GGTGACAGCAGCATTGATATTCTTTACTGCTTTCTACTTGGGGTTATGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGCAGCATTGATATTCTTTACTGCTTTCTACTTGGGGTTATGCT  950

seq1  GGAGAGAAGTAGAATTTTTTTTTTTGTATAAATGAACAAGTAAAACAGTC  1000
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  GGAGAG-AGTAGAATTTTTTTTTTTGTAT-AATGAACAAGTAAAACAGTC  998

seq1  TACTTATGTGTTTGTATATTAGCTCGCTTCTGTCTATTGAATATTAAATT  1050
      ||||||||||||||| ||||||| ||| |||||| |||||||| ||||||
seq2  TACTTATGTGTTTGT-TATTAGCCCGC-TCTGTC-ATTGAATA-TAAATT  1044

seq1  T  1051
      |
seq2  T  1045