BAC Information

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BAC

Clone NameB6Ng01-021B11
Chromosome5 (Build37)17 (Build37)
Map Location 99,199,247 - 99,200,14257,577,896 - 57,577,963
singlet/doubletsingletsinglet
Overlap gene1700007G11Rik
Upstream geneAntxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8, Fgf5
Downstream geneBmp3, Prkg2, LOC100041680, Rasgef1b, A930011G23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021B11.bB6Ng01-021B11.g
ACCDH853697DH853698
length898189
definitionDH853697|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B11, 5' end.DH853698|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(99,199,247 - 99,200,142)(57,577,896 - 57,577,963)
sequence
gaattcttgttagcatcctccatgctcctcaccttggagctgactccctc
actaggactctagatctgtggttggacatctggaatgttctcttgctatc
tccaaacaccgagggagagaagaatggaaacagaagacagagagtcccac
tgccagacttcctcatagctgggctgcagattttggagttatgaaagatc
tttcaatggtgccactggaaagtgtcaggactatcctggattacttccca
gttgcaatcagggggtgagaactgaaagttcaacaaagagtgccagtacc
tagttctataataatagagttatgtggccatttatggtcaaaatgctaag
gcagaaggcttgctcagagcagaaccctggaagagggtaacgccaaggtg
agcaggtgccagagacagtcaaatgcggcgtgatacccgacaggctcatg
tatttaggcctttggcgcacactggtggtgccctttcgggaaggctgtgc
accctttgggaggaggtcccttggtagtagaagtcaaacaccctgggcag
accttgacgttttatgactacttcccatctaccttcttcttcccgactct
ctaagtcatgtgaccagctagcttagctccagctgccacgccctccctga
cattatgacagtaaactgctcttaaacattaaactacagtaaactcttct
tacttgaattgctttgccagcaatctccatcccggtacagggacatgctc
aatgtgccatatctcattatcattctgctgctactgccacagattgctgc
ttagcattttataagaaactccagggtataaactttgatatctatgaaga
gcacacaaggcaggatgtgtaacttggcttgggtgtgtataattatta
tttggatcttttatgtacaatatcataccatctaaaatgggtataatttg
gcttctcctttccctattgtatccttttcattttctactttgtcttgttg
tagcttgttcttttaagcactctattgaaaaggagtggagcagcctttct
ttttttttttttttttttttgggttttcgagacagggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_99199247_99200142
seq2: B6Ng01-021B11.b_39_936 (reverse)

seq1  TAATAATTATAACACACCCACGCAAGTTTACACATCTTGCCTTGTGTGCT  50
      |||||||||| ||||||||| || |  ||||||||| |||||||||||||
seq2  TAATAATTAT-ACACACCCAAGCCAAGTTACACATCCTGCCTTGTGTGCT  49

seq1  CTTCATAGATATCAAAGTTTATACCCTGGAGTTTCTTATAAATTGCT-AG  99
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  CTTCATAGATATCAAAGTTTATACCCTGGAGTTTCTTATAAAATGCTAAG  99

seq1  CAGCATTCTGTGGCAGTAGCAGCAGAATGATAATGAGATATGGCACATTG  149
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATCTGTGGCAGTAGCAGCAGAATGATAATGAGATATGGCACATTG  149

seq1  AGCATGTCCCTGTACCGGGATGGAGATTGCTGGCAAAGCAATTCAAGTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTCCCTGTACCGGGATGGAGATTGCTGGCAAAGCAATTCAAGTAA  199

seq1  GAAGAGTTTACTGTAGTTTAATGTTTAAGAGCAGTTTACTGTCATAATGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTTTACTGTAGTTTAATGTTTAAGAGCAGTTTACTGTCATAATGT  249

seq1  CAGGGAGGGCGTGGCAGCTGGAGCTAAGCTAGCTGGTCACATGACTTAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGGCGTGGCAGCTGGAGCTAAGCTAGCTGGTCACATGACTTAGA  299

seq1  GAGTCGGGAAGAAGAAGGTAGATGGGAAGTAGTCATAAAACGTCAAGGTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCGGGAAGAAGAAGGTAGATGGGAAGTAGTCATAAAACGTCAAGGTC  349

seq1  TGCCCAGGGTGTTTGACTTCTACTACCAAGGGACCTCCTCCCAAAGGGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGGGTGTTTGACTTCTACTACCAAGGGACCTCCTCCCAAAGGGTG  399

seq1  CACAGCCTTCCCGAAAGGGCACCACCAGTGTGCGCCAAAGGCCTAAATAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTTCCCGAAAGGGCACCACCAGTGTGCGCCAAAGGCCTAAATAC  449

seq1  ATGAGCCTGTCGGGTATCACGCCGCATTTGACTGTCTCTGGCACCTGCTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCTGTCGGGTATCACGCCGCATTTGACTGTCTCTGGCACCTGCTC  499

seq1  ACCTTGGCGTTACCCTCTTCCAGGGTTCTGCTCTGAGCAAGCCTTCTGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGCGTTACCCTCTTCCAGGGTTCTGCTCTGAGCAAGCCTTCTGCC  549

seq1  TTAGCATTTTGACCATAAATGGCCACATAACTCTATTATTATAGAACTAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTTTGACCATAAATGGCCACATAACTCTATTATTATAGAACTAG  599

seq1  GTACTGGCACTCTTTGTTGAACTTTCAGTTCTCACCCCCTGATTGCAACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGCACTCTTTGTTGAACTTTCAGTTCTCACCCCCTGATTGCAACT  649

seq1  GGGAAGTAATCCAGGATAGTCCTGACACTTTCCAGTGGCACCATTGAAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTAATCCAGGATAGTCCTGACACTTTCCAGTGGCACCATTGAAAG  699

seq1  ATCTTTCATAACTCCAAAATCTGCAGCCCAGCTATGAGGAAGTCTGGCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCATAACTCCAAAATCTGCAGCCCAGCTATGAGGAAGTCTGGCAG  749

seq1  TGGGACTCTCTGTCTTCTGTTTCCATTCTTCTCTCCCTCGGTGTTTGGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCTCTGTCTTCTGTTTCCATTCTTCTCTCCCTCGGTGTTTGGAG  799

seq1  ATAGCAAGAGAACATTCCAGATGTCCAACCACAGATCTAGAGTCCTAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAGAGAACATTCCAGATGTCCAACCACAGATCTAGAGTCCTAGTG  849

seq1  AGGGAGTCAGCTCCAAGGTGAGGAGCATGGAGGATGCTA--CAGAATTC  896
      |||||||||||||||||||||||||||||||||||||||   |||||||
seq2  AGGGAGTCAGCTCCAAGGTGAGGAGCATGGAGGATGCTAACAAGAATTC  898

seq1: chr17_57577896_57577963
seq2: B6Ng01-021B11.g_202_264 (reverse)

seq1  AACCCTGTCTCGAAAAACCAAAAAAAAAAAAAAAAAAAAGTGAAAGCTCA  50
      |||||||||||||||| ||||||||||||||||||||||   || |||  
seq2  AACCCTGTCTCGAAAACCCAAAAAAAAAAAAAAAAAAAAAGAAAGGCTGC  50

seq1  TCTTTCTTTCTCCTTTTC  68
      ||       |||||||||
seq2  TC-----CACTCCTTTTC  63