BAC Information

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BAC

Clone NameB6Ng01-021P10
Chromosome5 (Build37)
Map Location 6,872,842 - 6,873,767
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041208, EG435830
Downstream geneLOC100042651, 4921511H03Rik, LOC242823, LOC667767
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021P10.b
ACCDH854326
length929
definitionDH854326|Mus musculus domesticus DNA, BAC clone: B6Ng01-021P10, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagcatattttattattaattagccagaataaagtcacattga
gtgcatatgtttacaagaagttctgttctaagcagcacatttcattaatt
tgcagagccactatttaactacaaatggagtaactgatgtgagctattga
tcattcctggctgcagagttcactcattcaactgacagtggctgagccca
tttattacaaatgttatgttttataaagacaagtaacagacatcgtctgt
gtttccatggaacattcagtattcctcctgacatcgtccttcaaaataaa
gcaggaatctgaatttgaccagattgctaactggaacaaatagttttagg
agagcacagatgattaagaaacatgtgaaagcataacactagaaaaaata
ttcacaaaactcacatgaggaaaacagattgtaaagagtagccattaaat
aagtagaaaaggcctgtagattaaccatttaaaaaaattaatcacatgat
agcatgtgaaaagtagagacactgttttcaaagtgcccaaatttacacat
tttgacacaattagggaagcaagaaaacttgatataattttgagaatgat
aatgttacatttttaagaactcattacacatgctgctatttttatgaaat
gacattgtgtgctatttggaatttgctttgaatgaatataacaatatagt
acagggacagtgtggtggtataaatgaaacaggaataatgcaacaggcat
ttcaatgggacagataggtcacagtgttactgtcggattcttaaagtttc
aactacaagatccagtgaactatctcagagtataaagatagaatactaaa
ggagatttttactaaatattgcttacaatagattacaagttgcttattat
atacatggagggctgggtattccaatcct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_6872842_6873767
seq2: B6Ng01-021P10.b_44_972

seq1  GAATTCCAAGCATATTTTATTATTAATTAGCCTGAATAAAGTCACATTGA  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAATTCCAAGCATATTTTATTATTAATTAGCCAGAATAAAGTCACATTGA  50

seq1  GTGCATATGTTTACAAGAAGTTCTGTCCTAAGCAGCACATTTCATTAATT  100
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTGCATATGTTTACAAGAAGTTCTGTTCTAAGCAGCACATTTCATTAATT  100

seq1  TGCAGAGCCACTATTTAACTACAAATGGAGTAACTGATGTGAGCTATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCCACTATTTAACTACAAATGGAGTAACTGATGTGAGCTATTGA  150

seq1  TCATTCCTGGCTGCAGAGTTCACTCATTCAACTGACAGTGGCTGAGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTGGCTGCAGAGTTCACTCATTCAACTGACAGTGGCTGAGCCCA  200

seq1  TTTATTACAAATGTTATGTTTTATAAAGACAAGTAACAGACATCGTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTACAAATGTTATGTTTTATAAAGACAAGTAACAGACATCGTCTGT  250

seq1  GTTTCCATGGAACATTCAGTATTCCTCCTGACATCGTCCTTCAAAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATGGAACATTCAGTATTCCTCCTGACATCGTCCTTCAAAATAAA  300

seq1  GCAGGAATCTGAATTTGACCAGATTGCTAACTGGAACAAATAGTTTTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAATCTGAATTTGACCAGATTGCTAACTGGAACAAATAGTTTTAGG  350

seq1  AGAGCACAGATGATTAAGAAACATGTGAAAGCATAACACTAGAAAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACAGATGATTAAGAAACATGTGAAAGCATAACACTAGAAAAAATA  400

seq1  TTCACAAAACTCACATGAGGAAAACAGATTGTAAAGAGTAGCCATTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAAACTCACATGAGGAAAACAGATTGTAAAGAGTAGCCATTAAAT  450

seq1  AAGTAGAAAAGGCCTGTAGATTAACCATTTAAAAAAATTAATCACATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAAAAGGCCTGTAGATTAACCATTTAAAAAAATTAATCACATGAT  500

seq1  AGCATGTGAAAAGTAGAGACACTGTTTTCAAAGTGCCCAAATTTACACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGAAAAGTAGAGACACTGTTTTCAAAGTGCCCAAATTTACACAT  550

seq1  TTTGACACAATTAGGGAAGCAAGAAAACTTGATATAATTTTGAGAATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACACAATTAGGGAAGCAAGAAAACTTGATATAATTTTGAGAATGAT  600

seq1  AATGTTACATTTTTAAGAACTCATTACACATGCTGCTA-TTTTATGAAAT  649
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATGTTACATTTTTAAGAACTCATTACACATGCTGCTATTTTTATGAAAT  650

seq1  GACATTGTGTGCTATTTGGAATTTGCTTTGAATGAATATAACAATATAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGTGTGCTATTTGGAATTTGCTTTGAATGAATATAACAATATAGT  700

seq1  ACAGGGACAGTGTGGTGGTATAAATGAAACAGGAATAATGCAACAAGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  ACAGGGACAGTGTGGTGGTATAAATGAAACAGGAATAATGCAACAGGCAT  750

seq1  TTCAAT-GGACAGATAGGTCACAGTGTTACTGTCGGATTCTTAAAGTTTC  798
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGGGACAGATAGGTCACAGTGTTACTGTCGGATTCTTAAAGTTTC  800

seq1  AACTACAAGATCCAGTGAACTATCTCAGAGTTATAAAGATAGAATACTAA  848
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AACTACAAGATCCAGTGAACTATCTCAGAG-TATAAAGATAGAATACTAA  849

seq1  AGGAGA-TTTTACTAAATATTGCTAACAATAGATTACAAGTTGCTTATTA  897
      |||||| ||||||||||||||||| |||||||||||||||||||||||||
seq2  AGGAGATTTTTACTAAATATTGCTTACAATAGATTACAAGTTGCTTATTA  899

seq1  TACACAT-GAAGGCTGGTCATTCCAACCCT  926
      || |||| || ||||||  ||||||| |||
seq2  TATACATGGAGGGCTGGGTATTCCAATCCT  929