BAC Information

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BAC

Clone NameB6Ng01-021P15
Chromosome5 (Build37)
Map Location 97,817,900 - 97,818,464
singlet/doubletsinglet
Overlap geneC80008
Upstream geneFras1, Anxa3, EG666266, LOC670358, Bmp2k, Paqr3, LOC100040598, EG433923, EG666293
Downstream geneGk2, Antxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8, Fgf5, 1700007G11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021P15.bB6Ng01-021P15.g
ACCDH854333DH854334
length7191,146
definitionDH854333|Mus musculus domesticus DNA, BAC clone: B6Ng01-021P15, 5' end.DH854334|Mus musculus domesticus DNA, BAC clone: B6Ng01-021P15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctataggatgcacctgcttctgccttctgagacagccctgtgacc
ctatctaatacttcttcttgttcttcatctttgggtcatacccaaccaga
ggccaccgtggaccttgttggggtcactttagtagttacagtatagtgct
ctgcataaagcaactaaactgttgcagagcagtgtgggtctgtagagtga
ggtggagactaggtggagaggaaaagagctctgctctgtaaacggtactc
aagatccacctagaacaggttttttgcagtacctttgataatctggtaaa
gcttaagctaaggacctcttctcgggaggtggaggggaggtgttccaaaa
ggcatcacaatcatggattataagagaaaattttactgaaataggatcgt
caaggattttaaatgtctgtaacaataatacatgtgctttagtaggtaag
aaataaaagtctagcaatatgtgtatggattagttatttctgggcaggtt
tgagaatagtataaattacattagagatgcctgcaatagctatactatca
tatgaatgtactacagttttattgtgacaaagccctaaagtatagcatgt
acttctggtgcatacattcacaattgaaacaaatgcaaaaatttcagttc
cttgcttcctgacacccattttcaagaataatgtcttccatctgttcatt
gcacatttaaggtaactgg
gaattctcacttgaggaatcctgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaattgttaagataaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctctattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactacttgaggatcccgcaatatatctcctggac
atatattcagaaaatgttccaactggtaagaaggacacatgctccattgt
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaactgtggtacatctacacaatg
gagtactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
taactcacatgatatgtactcactgatatgtggatattagcccagaaact
tagaatacccaaggtataggatgcaatttgcgaagcacatgagactcagg
aggaacaaagagcatggtgtggacgctttgccccttcttagaattgggag
cggaacgcccatggagggaatttcagagacaaactttggagctgagatga
aggggtggaccgtctagagactgccatatctgggaatccatccagtaatc
agcctccaaacgctgacaccattgcatacactagtgggattgtgctgaaa
ggacccttctatagctgtctcttgtgaggctatgctggggcctgggaaac
acagaagtggagctcacagtcagctagtggatggatcacaggccccaatg
agagctagagaagcacccagagctgagggatctgcaccctatgggtgaca
catatgaactacagtgccccaggagctcgtgtctctagctgcatattatc
gaaggaggctgtcgccatcatgcaagaatgcattgtctgcgaacttatat
gctctatgcagaatgctcagctggaatatggatatagcgcgctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_97817900_97818464
seq2: B6Ng01-021P15.b_196_764 (reverse)

seq1  CCAGTTACC-TAAATGTGC-ATGAACAGATGGAAGACATTATTCTTGAAA  48
      ||||||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  CCAGTTACCTTAAATGTGCAATGAACAGATGGAAGACATTATTCTTGAAA  50

seq1  ATGGGTGTCAGGAAGCAAGGAACTGAAA-TTTTGCATTTGTTTCAATTGT  97
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATGGGTGTCAGGAAGCAAGGAACTGAAATTTTTGCATTTGTTTCAATTGT  100

seq1  GAATGTATGCACCAGAAGTACATGCTATAC-TTAGGGCTTTGTCACAATA  146
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAATGTATGCACCAGAAGTACATGCTATACTTTAGGGCTTTGTCACAATA  150

seq1  AAACTGTAGTACATTCATATGATAGTATAGCTATTGCAGGCATCTCTAAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTAGTACATTCATATGATAGTATAGCTATTGCAGGCATCTCTAAT  200

seq1  GTAATTTATACTATTCTCAAACCTGCCCAGAAATAACTAATCCATACACA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTATACTATTCTCAAACCTGCCCAGAAATAACTAATCCATACACA  250

seq1  TATTGCTAGACTTTTATTTCTTACCTACTAAAGCACATGTATTATTGTTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTAGACTTTTATTTCTTACCTACTAAAGCACATGTATTATTGTTA  300

seq1  CAGACATTTAAAATCCTTGACGATCCTATTTCAGTAAAATTTTCTCTTAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATTTAAAATCCTTGACGATCCTATTTCAGTAAAATTTTCTCTTAT  350

seq1  AATCCATGATTGTGATGCCTTTTGGAACACCTCCCCTCCACCTCCCGAGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATGATTGTGATGCCTTTTGGAACACCTCCCCTCCACCTCCCGAGA  400

seq1  AGAGGTCCTTAGCTTAAGCTTTACCAGATTATCAAAGGTACTGCAAAAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCCTTAGCTTAAGCTTTACCAGATTATCAAAGGTACTGCAAAAAA  450

seq1  CCTGTTCTAGGTGGATCTTGAGTACCGTTTACAGAGCAGAGCTCTTTTCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCTAGGTGGATCTTGAGTACCGTTTACAGAGCAGAGCTCTTTTCC  500

seq1  TCTCCACCTAGTCTCCACCTCACTCTACAGACCCACACTGCTCTGCAACA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACCTAGTCTCCACCTCACTCTACAGACCCACACTGCTCTGCAACA  550

seq1  GTTTAGTTGCTTTATGCAG  565
      |||||||||||||||||||
seq2  GTTTAGTTGCTTTATGCAG  569