MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-023M11
Chromosome	5 (Build37)
Map Location	13,686,744 - 13,687,390
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC668069, LOC433845, LOC625989, LOC670717, Sema3a
Downstream gene	LOC208055, LOC626053, Speer3, EG626067, LOC668085, LOC384149, LOC384148, Sema3e, LOC100042957, Pclo
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC433845 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433845
definition	note : glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo : _no_value

name	LOC625989 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 47 ESTs pseudo : _no_value

name	LOC670717 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 367 ESTs, 12 Proteins

name	Sema3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20346 MGI:107558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC208055 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:208055
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins pseudo : _no_value

name	LOC626053 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626053
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Speer3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71026 MGI:1918276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG626067 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626067 MGI:3644295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC668085 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC384149 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC384148 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384148
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Sema3e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20349 MGI:1340034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Pclo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26875 MGI:1349390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC670717 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253543 GeneID:670717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 367 ESTs, 12 Proteins product : similar to cytochrome c transcript_id : XM_001479414.1

name	Sema3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543680 GeneID:20346 MGI:107558
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A transcript_id : NM_009152.2

name	Speer3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350107 GeneID:71026 MGI:1918276
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated glutamate (E)-rich protein 3 transcript_id : NM_027650.2

name	EG626067 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374234 GeneID:626067 MGI:3644295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins product : predicted gene, EG626067 transcript_id : XM_890628.2

name	Sema3e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113199776 GeneID:20349 MGI:1340034
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E transcript_id : NM_011348.2

name	LOC100042957 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253545 GeneID:100042957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042957 transcript_id : XM_001479451.1

name	Pclo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15277339 GeneID:26875 MGI:1349390
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : piccolo (presynaptic cytomatrix protein) transcript_id : NM_011995.2

name	LOC670717 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253544 GeneID:670717
definition	codon_start : 1 product : similar to cytochrome c protein_id : XP_001479464.1

name	Sema3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543681 CCDS:CCDS19092.1 GeneID:20346 MGI:107558
definition	GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030517 - negative regulation of axon extension [Evidence IGI] [Evidence IDA]; GO:0007399 - nervous system development [Evidence IEA] codon_start : 1 exception : mismatches in translation note : sema III; collapsin-1; semaphorin III product : semaphorin 3A protein_id : NP_033178.2

name	Speer3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386246 GeneID:71026 MGI:1918276
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : sperm-associated glutamate (E)-rich protein 3; spermatogenic-associated glutamate (E)-rich protein 3 product : spermatogenesis associated glutamate (E)-rich protein 3 protein_id : NP_081926.1

name	EG626067 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82801813 GeneID:626067 MGI:3644295
definition	codon_start : 1 product : similar to spermatogenesis associated glutamate (E)-rich protein 2 protein_id : XP_895721.1

name	Sema3e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113199777 CCDS:CCDS19093.1 GeneID:20349 MGI:1340034
definition	GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA] codon_start : 1 product : semaphorin 3E protein_id : NP_035478.2

name	LOC100042957 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253546 GeneID:100042957
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479501.1

name	Pclo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15277340 GeneID:26875 MGI:1349390
definition	GO_component : GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] [Evidence ISS]; GO:0005544 - calcium-dependent phospholipid binding [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005522 - profilin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0019933 - cAMP-mediated signaling [Evidence IDA]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IDA]; GO:0030073 - insulin secretion [Evidence IDA]; GO:0017157 - regulation of exocytosis [Evidence IDA]; GO:0016080 - synaptic vesicle targeting [Evidence NAS] [Evidence ISS] codon_start : 1 exception : mismatches in translation note : aczonin product : piccolo (presynaptic cytomatrix protein) protein_id : NP_036125.2

name	LOC668069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668069
definition	number : 1 pseudo : _no_value

name	LOC626053 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626053
definition	number : 1 pseudo : _no_value

name	LOC626053 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626053
definition	number : 2 pseudo : _no_value

name	LOC626053 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626053
definition	number : 3 pseudo : _no_value

name	LOC626053 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626053
definition	number : 4 pseudo : _no_value

name	LOC626053 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626053
definition	number : 5 pseudo : _no_value

name	LOC668085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668085
definition	number : 3 pseudo : _no_value

name	LOC668085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668085
definition	number : 2 pseudo : _no_value

name	LOC668085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668085
definition	number : 1 pseudo : _no_value

name	LOC384149 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384149
definition	number : 1 pseudo : _no_value

name	LOC384149 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384149
definition	number : 2 pseudo : _no_value

name	LOC384148 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384148
definition	number : 1 pseudo : _no_value

name	LOC625989 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253542 GeneID:625989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 47 ESTs product : hypothetical LOC625989 pseudo : _no_value transcript_id : XR_034188.1

name	LOC208055 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253525 GeneID:208055
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins product : similar to Anaphase-promoting complex subunit 5 pseudo : _no_value transcript_id : XR_032939.1

clone name	MSMg01-351E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398N05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-115P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496E19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-441C14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-311L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507M20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-093F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079E09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-023M11.b	B6Ng01-023M11.g
ACC	DH855605	DH855606
length	890	647
definition	DH855605\|Mus musculus domesticus DNA, BAC clone: B6Ng01-023M11, 5' end.	DH855606\|Mus musculus domesticus DNA, BAC clone: B6Ng01-023M11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc ctgcgcagagaggcagtgcgcagactcattcattcccagagaggaacaaa ggaaaatacaacaggcatttccggtctttgaaggagccgagggtgggcgt gtccacgctccggtagaatacttacaaattaaagaaattgccgagtcggt ccgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggc ttgccggcatggcactaactcctgccgactggcaaacggttgtaaaagcc gctctccctagtatgggcaaatatatggaatggagagcgctttggcacga agctgcacaagcgcaggcccgagcaaacgcagctgctttgactccagagc agagagattggacttttgacttgttaacgggtcagggagcttattctgct gatcagacaaactaccattggggagcttatgcccagatttcttccacggc tattagggcctggaaggcgctctctcgagcaggtgaaaccactgggcagt taacaaagataatccagggacctcacgaatccttctcagattttgtggcc agaatgacagaggcagcagagcgtatttttggagagtcagagcaagctgc gcctctgatagaacagctaatctatgagcaagccacaaaggagtgccgag cggccatagccccaagaaagaacaaaggcttacagactgg	gaattcattcctcctcaacgaaaaaattgtacaagcagaacttataccta tagtaggtaaaatttattattatattttgtggcaagcagttagttattca gtgctttaaatatgcttttgtctggttcagacggtctcttattcattatt ctgtttcagcttgctataactaatctattattaatcagttaaattagctt ctgctcgagtaatataagaaaatgtttctatttcacgttagcatcgacat tattgcatctttaatgaggcttatttttactgtaaattatcatcagaatc ccagttctccctgatttgcttacgttaccctgagcttgtcacatcttgtc ttgttctgtagtgtctttaaattaaatgtattatataattaataattata attaaattatattatttctgataacagatgtttaagttgagcatctgcct caaattattcagtacttcaggtttgttttgtttgtgtatgtacccatatg tgtgtatgtatgtatgtatgtatgtatgatgtgtgcacacacatgtgcat gtgaaggtcagctgatgaaattggatgtcttctgttttgcctctctgcct tagggtttaagactggctagctcactgaaccaggcgctgattgatta
quality values	Open. Hide. 57 34 23 34 57 47 52 52 47 53 53 53 57 42 47 47 61 61 33 52 24 61 61 61 61 61 9 9 6 4 7 7 6 7 9 9 9 26 16 16 25 61 47 61 55 61 55 47 55 61 52 55 55 61 61 61 61 61 55 61 61 61 61 61 49 61 61 61 61 55 28 24 22 26 19 19 26 35 21 49 49 52 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 52 61 59 59 59 52 61 59 59 59 59 59 59 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 59 59 61 59 61 59 61 61 61 59 59 59 61 59 59 59 59 59 61 61 61 59 59 61 59 59 59 61 61 61 61 61 61 59 52 59 59 59 59 59 61 59 59 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 59 61 59 61 61 61 61 59 61 61 61 61 59 61 59 49 61 61 61 61 59 61 61 61 59 61 61 61 59 61 59 59 61 59 61 61 61 61 61 61 59 59 61 59 61 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 59 59 59 59 52 61 52 59 59 59 61 61 61 61 59 61 59 52 59 59 52 61 59 61 61 59 61 61 59 59 61 61 61 59 59 59 52 59 59 59 59 59 59 59 59 61 61 61 59 59 59 59 59 52 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 61 52 59 52 55 55 52 59 61 61 59 61 59 61 52 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 55 61 55 61 61 61 61 61 61 61 61 55 52 61 52 33 52 52 28 19 27 36 40 41 55 52 52 55 55 55 61 55 61 52 61 55 55 61 61 55 55 61 61 55 55 61 52 61 61 49 55 61 55 55 52 47 61 55 55 61 55 55 50 55 55 55 50 50 41 55 55 61 61 61 55 55 61 61 55 49 61 49 47 55 55 55 61 38 61 61 61 55 61 50 43 43 50 50 49 61 55 61 55 50 55 43 55 61 37 61 61 38 50 37 49 43 49 43 45 35 39 43 31 61 43 53 53 43 61 22 52 43 43 50 50 43 50 50 29 43 45 50 45 43 43 50 50 52 45 50 35 39 22 31 61 29 47 50 14 61 23 53 42 43 27 10 37 50 61 50 50 53 61 61 61 52 50 43 47 61 31 52 50 46 53 47 46 47 39 48 50 38 61 61 61 45 53 40 38 43 45 53 45 42 53 42 41 53 53 52 42 39 43 53 45 22 38 47 50 45 32 53 47 42 53 47 57 47 47 27 43 20 50 30 43 50 28 36 30 47 47 31 38 42 27 57 47 47 42 50 31 50 28 45 42 53 26 53 16 10 18 29 6 18 27 17 30 31 38 21 23 32 12 47 10 30 34 43 45 45 36 16 30 13 45 30 53 23 7 14 13 37 36 32 19 38 36 14 35 20 34 26 50 18 14 10 6 8 9 24 29 10 45 45 19 37 39 18 8 20 17 25 37 23 53 51 37 34 34 52 36 10 4 9 17 22 11 19 23 19 39 42 35 38 32 17 23 10 27 30 18 17 14 24 36 21 21 10 12 30 19 23 38 26 28 15 23 40 10 42 14 14 19 20 16 13 50 15 21 21 32 32 42 57 57 57 34 38 21 31 20 30 30 22 29 22 21 39 21 37 12 25 31 33 39 36 23 13 14 29 29 40 37 32 33 23 9 10 38 35 23 13 27 36 19 9 40 32 32 28 33 40 30 35 12 18 20 29 21 20 23 20 27 29 28 12 19 30 33 10 23 39 30 24 17 33 22 34 33 37 24 36 16 21 22 12 13 27 27 34 30 24 6 11 13 29 6 28 26 27 20 17 17 21 28 22 14 23 29 11 12 5 17 8 5 10 9	Open. Hide. 61 29 31 27 12 13 12 7 10 9 7 9 7 9 20 33 26 21 31 50 55 61 61 61 61 52 49 61 47 61 61 61 55 49 61 61 61 44 55 61 61 61 61 61 59 59 59 41 35 35 28 21 26 28 33 35 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 59 59 43 59 61 59 59 59 59 61 61 61 59 52 59 59 59 59 59 61 59 59 59 59 59 59 61 59 59 59 59 45 61 59 36 59 37 49 49 49 41 49 59 59 59 44 52 59 61 52 52 52 43 52 59 59 59 59 59 49 39 59 59 59 61 61 61 61 52 41 49 52 52 49 52 52 52 45 52 61 59 59 61 61 61 61 61 59 59 52 61 61 61 61 61 61 59 59 49 59 59 59 59 49 59 52 52 52 49 59 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 52 52 52 52 52 59 61 59 59 59 59 59 59 59 59 59 52 59 59 59 50 36 52 52 39 59 59 61 59 59 61 49 45 59 36 49 52 59 59 61 59 61 61 59 61 59 61 61 61 61 61 61 59 52 52 59 59 59 59 61 61 61 61 52 52 52 52 49 49 59 52 39 61 52 52 52 49 52 49 43 49 50 59 52 52 59 59 59 61 61 59 59 59 61 59 52 49 52 52 39 52 52 59 59 59 59 59 59 61 52 59 59 59 59 52 59 52 52 49 52 52 45 52 59 52 59 52 59 59 43 45 44 45 52 59 61 52 59 61 59 59 59 59 61 61 61 61 61 61 59 61 59 61 61 59 59 61 59 59 59 59 59 52 55 59 59 59 59 55 55 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 59 59 61 52 45 52 52 45 43 61 59 61 59 61 59 61 61 59 61 61 52 59 45 45 45 52 49 45 52 44 49 45 43 59 59 61 59 61 59 52 52 52 49 34 43 52 52 52 52 59 52 43 61 61 61 61 61 61 59 59 59 61 40 59 59 61 59 61 59 61 61 61 59 52 59 50 52 41 52 61 61 61 59 61 61 61 59 61 59 61 59 59 59 59 59 61 61 61 61 61 61 61 59 59 59 59 52 52 61 61 59 59 59 59 28 25 28 13 18 19 13 41 21 23 13 14 19 19 43 31 30 13 24 19 15 32 16 11 23 8 16 15 11 11 14 8 15 16 13 52 28 24 11 8 15 10 19 12 34 28 28 28 28 31 28 43 21 27 20 23 17 11 22 12 11 11 21 19 26 15 19 9 15 16 10 9 9 19 9 11 10 11 12 31 15 38 38 36 27 24 24 24 23 38 34 38 25 38 24 37 37 17 14 18 8 14 14 13 21 27 19 23 14 21 19 13 13 21 19

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_13686744_13687390
seq2: B6Ng01-023M11.g_72_718

seq1  GAATTCATTCCTCCTCAACGAAAAAATTGTACAAGCAGAACTTATACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCTCCTCAACGAAAAAATTGTACAAGCAGAACTTATACCTA  50

seq1  TAGTAGGTAAAATTTATTATTATATTTTGTGGCAAGCAGTTAGTTATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGTAAAATTTATTATTATATTTTGTGGCAAGCAGTTAGTTATTCA  100

seq1  GTGCTTTAAATATGCTTTTGTCTGGTTCAGACGGTCTCTTATTCATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTAAATATGCTTTTGTCTGGTTCAGACGGTCTCTTATTCATTATT  150

seq1  CTGTTTCAGCTTGCTATAACTAATCTATTATTAATCAGTTAAATTAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCAGCTTGCTATAACTAATCTATTATTAATCAGTTAAATTAGCTT  200

seq1  CTGCTCGAGTAATATAAGAAAATGTTTCTATTTCACGTTAGCATCGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCGAGTAATATAAGAAAATGTTTCTATTTCACGTTAGCATCGACAT  250

seq1  TATTGCATCTTTAATGAGGCTTATTTTTACTGTAAATTATCATCAGAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCATCTTTAATGAGGCTTATTTTTACTGTAAATTATCATCAGAATC  300

seq1  CCAGTTCTCCCTGATTTGCTTACGTTACCCTGAGCTTGTCACATCTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTCCCTGATTTGCTTACGTTACCCTGAGCTTGTCACATCTTGTC  350

seq1  TTGTTCTGTAGTGTCTTTAAATTAAATGTATTATATAATTAATAATTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGTAGTGTCTTTAAATTAAATGTATTATATAATTAATAATTATA  400

seq1  ATTAAATTATATTATTTCTGATAACAGATGTTTAAGTTGAGCATCTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTATATTATTTCTGATAACAGATGTTTAAGTTGAGCATCTGCCT  450

seq1  CAAATTATTCAGTACTTCAGGTTTGTTTTGTTTGTGTATGTACCCATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATTCAGTACTTCAGGTTTGTTTTGTTTGTGTATGTACCCATATG  500

seq1  TGTGTATGTATGTATGTATGTATGTATGATGTGTGCACACACATGTGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTATGTATGTATGTATGTATGATGTGTGCACACACATGTGCAT  550

seq1  GTGAAGGTCAGCTGATGAAATTGGATGTCTTCTGTTTTGCCTCTCTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGTCAGCTGATGAAATTGGATGTCTTCTGTTTTGCCTCTCTGCCT  600

seq1  TAGCGTTTGAGACTGGCTAGCTCACTGAACCAGGCGCTGATTGATTA  647
      ||| |||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTTAAGACTGGCTAGCTCACTGAACCAGGCGCTGATTGATTA  647

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information