BAC Information

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BAC

Clone NameB6Ng01-026G09
Chromosome5 (Build37)
Map Location 42,306,449 - 42,307,324
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC208522, Rab28, Bapx1, A230054D04Rik, LOC384308
Downstream geneLOC100040588, EG636612
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026G09.bB6Ng01-026G09.g
ACCDH857455DH857456
length1,141872
definitionDH857455|Mus musculus domesticus DNA, BAC clone: B6Ng01-026G09, 5' end.DH857456|Mus musculus domesticus DNA, BAC clone: B6Ng01-026G09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccgaaggatccagcactacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
attcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctccacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttattgaaa
ggacccagaagtagctgtctcttgtgagactatgccgcggggcctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcataggctcct
atggagagtaaagaagtaccaagagctaagggatctgcacctgtagggga
ccacttataactaaccatacccgacctctgatcagtgccttatataaaaa
tggctatcgccatccctgaagaaggccctttgctcgcatttttgggcctg
tactggagtccgaccaaatgggagtgggtcgggcggggagc
gaattcccagtacaaggcctattgtttggaggagccgacaatcgattcag
gtcttcattgagcagtaggtgactgaagcagagtcatcaccaatgttatt
ggtctcttcctggccaaagagaaagccaagacaatccctgcgtgaatttg
aaacaaatgttggggaaacaaacaggttttatttctcacctacagactta
atgtaaatatggataccaaggccttatactcagcatcgatgtctgaagag
gctgtgagagggtgggttggaggcatgcatccaaataatttgtttgctgc
tcttgggtgaaggttttgcttgaagaatgagaataggaattggattctca
tgaatgctctgagttttctcctggagcgagagcagtcactaccgaggtgc
cgggatgttcaggcgtactggactgcacaggagattccatttttccccga
ggagcgctctcaggggtgcaggtggcttgagagagtttgactgagacttc
attctcagaggctgggcagcagtggaaattacatcaggaaaatatggatg
gattcagataaaacctgggcaggggaaaggaggactgactggtttaggag
gtgattctgaacggactgcatggaagtccagagtcaggggctttatgagg
actgtgctgcttttgagctttacctattgtttgggccatgagtaaaatgc
cttgaatgggcaaattctaatatcccttaaagaatgaaaatggttttttc
atacaatacattttgattatgggtttccctccctcagcactctcagttct
tccctacttctcttaaccacacaaatccacacccttctttctctcttatt
tcataagaagcagcatctacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_42306449_42307324
seq2: B6Ng01-026G09.g_68_939

seq1  GAATTCCCAGTACAAGGCCTATTGTTTGGAGGAGCCGACAATCGATTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGTACAAGGCCTATTGTTTGGAGGAGCCGACAATCGATTCAG  50

seq1  GTCTTCATTGAGCAGTAGGTGACTGAAGCAGAGTCATCACCAATGTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCATTGAGCAGTAGGTGACTGAAGCAGAGTCATCACCAATGTTATT  100

seq1  GGTCTCTTCCTGGCCAAAGAGAAAGCCAAGACAATCCCTGCGTGAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTTCCTGGCCAAAGAGAAAGCCAAGACAATCCCTGCGTGAATTTG  150

seq1  AAACAAATGTTGGGGAAACAAACAGGTTTTATTTCTCACCTACAGACTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATGTTGGGGAAACAAACAGGTTTTATTTCTCACCTACAGACTTA  200

seq1  ATGTAAATATGGATACCAAGGCCTTATACTCAGCATCGATGTCTGAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATATGGATACCAAGGCCTTATACTCAGCATCGATGTCTGAAGAG  250

seq1  GCTGTGAGAGGGTGGGTTGGAGGCATGCATCCAAATAATTTGTTTGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAGAGGGTGGGTTGGAGGCATGCATCCAAATAATTTGTTTGCTGC  300

seq1  TCTTGGGTGAAGGTTTTGCTTGAAGAATGAGAATAGGAATTGGATTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGTGAAGGTTTTGCTTGAAGAATGAGAATAGGAATTGGATTCTCA  350

seq1  TGAATGCTCTGAGTTTTCTCCTGGAGCGAGAGCAGTCACTACCGAGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCTCTGAGTTTTCTCCTGGAGCGAGAGCAGTCACTACCGAGGTGC  400

seq1  CGGGATGTTCAGGCGTACTGGACTGCACAGGAGATTCCATTTTTCCCCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGATGTTCAGGCGTACTGGACTGCACAGGAGATTCCATTTTTCCCCGA  450

seq1  GGAGCGCTCTCAGGGGTGCAGGTGGCTTGAGAGAGTTTGACTGAGACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCGCTCTCAGGGGTGCAGGTGGCTTGAGAGAGTTTGACTGAGACTTC  500

seq1  ATTCTCAGAGGCTGGGCAGCAGTGGAAATTACATCAGGAAAATATGGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAGAGGCTGGGCAGCAGTGGAAATTACATCAGGAAAATATGGATG  550

seq1  GATTCAGATAAAACCTGGGCAGGGGAAAGGAGGACTGACTGGTTTAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGATAAAACCTGGGCAGGGGAAAGGAGGACTGACTGGTTTAGGAG  600

seq1  GTGATTCTGAACGGACTGCATGGAAGTCCAGAGTCAGGGGCTTTATGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCTGAACGGACTGCATGGAAGTCCAGAGTCAGGGGCTTTATGAGG  650

seq1  ACTGTGCTGCTTTTGAGCTTTACCTATTGTTTGGGCCATGAGTAAAATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCTGCTTTTGAGCTTTACCTATTGTTTGGGCCATGAGTAAAATGC  700

seq1  CTTGAATGGGCAAATTCTAATATCCCTTAAAGAATGAAAATGGATTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTTGAATGGGCAAATTCTAATATCCCTTAAAGAATGAAAATGG-TTTTTT  749

seq1  CATACAATACATTTTGATTATGGTTTTCCCTCCCTCAGCAACTCTCAGTT  800
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  CATACAATACATTTTGATTATGGGTTTCCCTCCCTCAGC-ACTCTCAGTT  798

seq1  CCTCCCTACTTCTC-TAACCACACAAATCCACACCCCTTCTTTCTCTCTT  849
      | |||||||||||| |||||||||||||||||| ||||||||||||||||
seq2  CTTCCCTACTTCTCTTAACCACACAAATCCACA-CCCTTCTTTCTCTCTT  847

seq1  ATTTCAATAAGAAGCAGGCATCAACAA  876
      ||||| |||||||||| ||||| ||||
seq2  ATTTC-ATAAGAAGCA-GCATCTACAA  872