BAC Information

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BAC

Clone NameB6Ng01-026J15
Chromosome5 (Build37)
Map Location 68,951,944 - 68,976,141
singlet/doubletdoublet
Overlap genenone
Upstream geneD830007B15Rik, Atp8a1, LOC100042458, EG330097, EG666977, AY616753
Downstream geneLOC666996, Kctd8, LOC545756, Yipf7, Guf1, Gnpda2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026J15.bB6Ng01-026J15.g
ACCDH857600DH857601
length1,082839
definitionDH857600|Mus musculus domesticus DNA, BAC clone: B6Ng01-026J15, 5' end.DH857601|Mus musculus domesticus DNA, BAC clone: B6Ng01-026J15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,951,944 - 68,953,036)(68,975,304 - 68,976,141)
sequence
gaattctctggaacgctgtttgtttggccacattttatcccatgagcaca
ggtcaaaatcaatttgaaatgccatgcacaccattttttgcacttataaa
atttttgaagtgaaaactatcttgtctttttggatgttttgcagaaaaat
ggtggagaagcagataaaaatataatcgtgtataccttctctatacacca
cagagtcctttgaatcacttttgttacctagagagctacaagacatttca
ggggcagtgtagaacatggctgtgcaatctgcagaggcagcaacgaatgt
ttgcaaatacatcttttcttattactgtgtcagcaacttctacttttgcc
aattgaatcatttagccagctgaaacctcgtgtatttgtttgctggtttt
ggccttctcagcaggagcccaagtaaaaatgactttctccacaaaacctc
tcttcctccttcctccttctccctcttcccccttctcctacctctacccc
catctgctgctttctcctctttccctcttatattgtttcactacagttaa
ccatcttgaacaccatcttctccaagatggatatcttaaacaaaacatgt
aaaatgtctaagaacgatagaaactacatgctcaaatatatatatgatgt
ttaagatattaatatttcctagactgtatattgctgtagttcatagctaa
tattcagaatacgtgtgattcatttgttgtgattaatatcatcacatcat
ttcatgcaatttttttcctacttttcctctccacagtgcactctgacaca
tcaggttttgctaggtacaccttctaacatctctgccttattcactagta
tactttattcatctaggtgttgtaactcacacatcaatagaaaataactt
ggataaattaattccacctcatactctacatacttatgatacagctgcaa
ttgattaaagaaaaaaacagtctgacaaaacagtcatagttttgactatt
gtaatcctatacccaatatcatatacctagattcctttgtctagagggta
ttttattaatttattcattttaatggtgtttt
gaattcactaatccaaaagcatatggatatttatctcagaaaattcttcc
taccacagctatttattcatttatacaatctttctgtacatatttcatgt
catataactagaaaattaagatgtatgtcccaataaattattcagaagca
taacactgtgattggtcagatgatgccagaagggtatacatctataaaaa
ttaaagaaataaaatttataattgctgaatatcataaaaattaattatct
agaaattatgaacatgttaggtttctcaaaattaccatctggaataagac
tagtaaacaatttattggctttttaaaatatttctcaaactgacaaaata
ttttagacaattgtttatgaacagattatattaaataattctccatgatt
tcattttgaaatctaagaattaatattaaatgttttaaaaatactcacga
tttctaatgtgttaaaacaacagttttgtagccaaggaacaacaatgcaa
atcataaaatgatctctaaagtaggaatgtggcaggcaaacgtatgtttg
gcagaaagttctcccagacctagcctactcattcattcccagacctagcc
tactcattcattcccagacctagcctactcattccccaagatgctctctc
tccagctataaagaaagaatgttccagcttgcagttgtcaattcttcaca
gtttcctgaatcttcccacattcattagttcaaaagataattcccaggca
attactgtaaaagaccatattcttcttaactcctggtacttttcgccaag
tgaggttacttgggggtttggttggttggttgggtttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_68951944_68953036
seq2: B6Ng01-026J15.b_47_1128

seq1  GAATTCTCTGGAACGCTGTTTGTTTGGCCACATTTTATCCCATGAGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGAACGCTGTTTGTTTGGCCACATTTTATCCCATGAGCACA  50

seq1  GGTCAAAATCAATTTGAAATGCCATGCACACCATTTTTTGCACTTATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAATCAATTTGAAATGCCATGCACACCATTTTTTGCACTTATAAA  100

seq1  ATTTTTGAAGTGAAAACTATCTTGTCTTTTTGGATGTTTTGCAGAAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAAGTGAAAACTATCTTGTCTTTTTGGATGTTTTGCAGAAAAAT  150

seq1  GGTGGAGAAGCAGATAAAAATATAATCGTGTATACCTTCTCTATACACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGAAGCAGATAAAAATATAATCGTGTATACCTTCTCTATACACCA  200

seq1  CAGAGTCCTTTGAATCACTTTTGTTACCTAGAGAGCTACAAGACATTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCCTTTGAATCACTTTTGTTACCTAGAGAGCTACAAGACATTTCA  250

seq1  GGGGCAGTGTAGAACATGGCTGTGCAATCTGCAGAGGCAGCAACGAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGTGTAGAACATGGCTGTGCAATCTGCAGAGGCAGCAACGAATGT  300

seq1  TTGCAAATACATCTTTTCTTATTACTGTGTCAGCAACTTCTACTTTTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATACATCTTTTCTTATTACTGTGTCAGCAACTTCTACTTTTGCC  350

seq1  AATTGAATCATTTAGCCAGCTGAAACCTCGTGTATTTGTTTGCTGGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAATCATTTAGCCAGCTGAAACCTCGTGTATTTGTTTGCTGGTTTT  400

seq1  GGCCTTCTCAGCAGGAGCCCAAGTAAAAATGACTTTCTCCACAAAACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTCAGCAGGAGCCCAAGTAAAAATGACTTTCTCCACAAAACCTC  450

seq1  TCTTCCTCCTTCCTCCTTCTCCCTCTTCCCCCTTCTCCTACCTCTACCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCCTTCCTCCTTCTCCCTCTTCCCCCTTCTCCTACCTCTACCCC  500

seq1  CATCTGCTGCTTTCTCCTCTTTCCCTCTTATATTGTTTCACTACAGTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTGCTTTCTCCTCTTTCCCTCTTATATTGTTTCACTACAGTTAA  550

seq1  CCATCTTGAACACCATCTTCTCCAAGATGGATATCTTAAACAAAACATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTGAACACCATCTTCTCCAAGATGGATATCTTAAACAAAACATGT  600

seq1  AAAATGTCTAAGAACGATAGAAACTACATGCTCAAATATATATATGATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCTAAGAACGATAGAAACTACATGCTCAAATATATATATGATGT  650

seq1  TTAAGATATTAATATTTCCTAGACTGTATATTGCTGTAGTTCATAGCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATATTAATATTTCCTAGACTGTATATTGCTGTAGTTCATAGCTAA  700

seq1  TATTCAGAATACGTGTGATTCATTTGTTGTGATTAATATCATCACATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGAATACGTGTGATTCATTTGTTGTGATTAATATCATCACATCAT  750

seq1  TTCATGCAATTTTTTTCCTACTTTTCCTCTCCACAGTGCACTCTGACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCAATTTTTTTCCTACTTTTCCTCTCCACAGTGCACTCTGACACA  800

seq1  TCAGGTTTTGCTAGGTACACCTTCTAACATCTCTGCCTTATTCACTAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTTTGCTAGGTACACCTTCTAACATCTCTGCCTTATTCACTAGTA  850

seq1  TACTTTATTCATCTAGGTGTTGTAACTCACACATCAATAGAAAATAACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATTCATCTAGGTGTTGTAACTCACACATCAATAGAAAATAACTT  900

seq1  GGATAAATTAATTCCACCTCATACTCTACATACTTATGATACAGCTGCAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGATAAATTAATTCCACCTCATACTCTACATACTTATGATACAGCTGC-A  949

seq1  ATTGATTAAAGAAAAAAACAGTCTGACAAAACAAGTCATAGTTTTGACTA  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTGATTAAAGAAAAAAACAGTCTGACAAAAC-AGTCATAGTTTTGACTA  998

seq1  TTGTAAATCCTATACACAATAATCATATAACCTAGATCTCTTTGTCCTAA  1050
      |||| |||||||||| |||| ||||||| ||||||||  |||||||   |
seq2  TTGT-AATCCTATACCCAAT-ATCATAT-ACCTAGATTCCTTTGTC--TA  1043

seq1  GAGGGGTATTTTATTTATTTTATTTCATTTTATATGGTGTTTT  1093
      || |||||||||||| ||||   ||||||||| ||||||||||
seq2  GA-GGGTATTTTATTAATTT--ATTCATTTTA-ATGGTGTTTT  1082

seq1: chr5_68975304_68976141
seq2: B6Ng01-026J15.g_66_904 (reverse)

seq1  CCAAA-CCAACCAACCAACCAAACCCCCAAGTAACCTCACTTGGCGAAAA  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCCAACCAACCAACCAAACCCCCAAGTAACCTCACTTGGCGAAAA  50

seq1  GTACCAGGAGTTAAGAAGAATATGGTCTTTTACAGTAATTGCCTGGGAAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGGAGTTAAGAAGAATATGGTCTTTTACAGTAATTGCCTGGGAAT  100

seq1  TATCTTTTGAACTAATGAATGTGGGAAGATTCAGGAAACTGTGAAGAATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTGAACTAATGAATGTGGGAAGATTCAGGAAACTGTGAAGAATT  150

seq1  GACAACTGCAAGCTGGAACATTCTTTCTTTATAGCTGGAGAGAGAGCATC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTGCAAGCTGGAACATTCTTTCTTTATAGCTGGAGAGAGAGCATC  200

seq1  TTGGGGAATGAGTAGGCTAGGTCTGGGAATGAATGAGTAGGCTAGGTCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAATGAGTAGGCTAGGTCTGGGAATGAATGAGTAGGCTAGGTCTG  250

seq1  GGAATGAATGAGTAGGCTAGGTCTGGGAGAACTTTCTGCCAAACATACGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAATGAGTAGGCTAGGTCTGGGAGAACTTTCTGCCAAACATACGT  300

seq1  TTGCCTGCCACATTCCTACTTTAGAGATCATTTTATGATTTGCATTGTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGCCACATTCCTACTTTAGAGATCATTTTATGATTTGCATTGTTG  350

seq1  TTCCTTGGCTACAAAACTGTTGTTTTAACACATTAGAAATCGTGAGTATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGGCTACAAAACTGTTGTTTTAACACATTAGAAATCGTGAGTATT  400

seq1  TTTAAAACATTTAATATTAATTCTTAGATTTCAAAATGAAATCATGGAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACATTTAATATTAATTCTTAGATTTCAAAATGAAATCATGGAGA  450

seq1  ATTATTTAATATAATCTGTTCATAAACAATTGTCTAAAATATTTTGTCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTAATATAATCTGTTCATAAACAATTGTCTAAAATATTTTGTCAG  500

seq1  TTTGAGAAATATTTTAAAAAGCCAATAAATTGTTTACTAGTCTTATTCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAATATTTTAAAAAGCCAATAAATTGTTTACTAGTCTTATTCCA  550

seq1  GATGGTAATTTTGAGAAACCTAACATGTTCATAATTTCTAGATAATTAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTAATTTTGAGAAACCTAACATGTTCATAATTTCTAGATAATTAAT  600

seq1  TTTTATGATATTCAGCAATTATAAATTTTATTTCTTTAATTTTTATAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGATATTCAGCAATTATAAATTTTATTTCTTTAATTTTTATAGAT  650

seq1  GTATACCCTTCTGGCATCATCTGACCAATCACAGTGTTATGCTTCTGAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACCCTTCTGGCATCATCTGACCAATCACAGTGTTATGCTTCTGAAT  700

seq1  AATTTATTGGGACATACATCTTAATTTTCTAGTTATATGACATGAAATAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTGGGACATACATCTTAATTTTCTAGTTATATGACATGAAATAT  750

seq1  GTACAGAAAGATTGTATAAATGAATAAATAGCTGTGGTAGGAAGAATTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAAAGATTGTATAAATGAATAAATAGCTGTGGTAGGAAGAATTTT  800

seq1  CTGAGATAAATATCCATATGCTTTTGGATTAGTGAATTC  838
      |||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATAAATATCCATATGCTTTTGGATTAGTGAATTC  839