BAC Information

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BAC

Clone NameB6Ng01-031P13
Chromosome5 (Build37)
Map Location 7,850,381 - 7,851,318
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042651, 4921511H03Rik, LOC242823
Downstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031, Abcb1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031P13.bB6Ng01-031P13.g
ACCDH861439DH861440
length1111,041
definitionDH861439|Mus musculus domesticus DNA, BAC clone: B6Ng01-031P13, 5' end.DH861440|Mus musculus domesticus DNA, BAC clone: B6Ng01-031P13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ccaggatacaacccacagaactcaagaaggttaacaagccaaggggccca
agtgagaatgtctcaatcccccttgagagggagaaaaatgcaaccagggg
gggggggggag
gaattctaaggaacatgactagtctgaacgtctcttggcagcccttattg
cttaagtaagcttggtcattttcagggaactttcagaatccttagttgta
ctgagtattttttttaattaggtattttcctcatttacatttccaatgtt
atcccaaaagtaccccataccctccccccctcccctacccacccactccc
acttcttggccctggcgttcccctgtactgaagcatctaaagtttgaaag
accaactaggccatcttctgatacatatgcagctagagacacgagatctg
ggggtactggttagttcgtactgttgttacatctataaggttgcagaccc
ctttagctccttggatacattctgtagctcctccattgggggccctgttt
tccatccaatagctgactgtgagcatccacttctgtgtttgctaggcccc
agcatagcctcacaagagacaactatatctgggtcgtttcagcaaaatct
tgctagtatatgcatgagtattatgtagtaagcggcctctttttagaaat
tcttggatctttaggagcttcccttcaagacagaatgtattactttgaca
aaattactatctaacaggggaagggagaagttagaagaggaagagaaagg
aaagtgaatggggcactgagttctatggtgacctgctcaagtgctacaga
ttatacccatttccaaaattaaaaaaaaaagatgaatttctgttttgaac
caaattgtatgaggtttgttgttgtggttcttgcctttatgtaatgattt
gctcacccaaaagattgtagtcttcagtcttttcccttagactacaatgc
aaagctaagtagatttatggagaggatccctgggtctagtctctctgtga
ggaagaccagagagctcccactctctgggaagaaaagctgccaacacaga
tagagacagcaggcaaaccttcatcacagcgagcagtctctgtgacaacc
taaaactgaatggtgtagaggtaggggtgggctacaacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7850381_7851318
seq2: B6Ng01-031P13.g_185_1105

seq1  GGTATTTTCCTCATTTACATTTCCAATGTTATCCCAAAAGTACCCCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTCCTCATTTACATTTCCAATGTTATCCCAAAAGTACCCCATAC  50

seq1  CCTCCCCCCCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCCCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCGTTC  100

seq1  CCCTGTACTGAAGCATCTAAAGTTTGAAAGACCAACTAGGCCATCTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTACTGAAGCATCTAAAGTTTGAAAGACCAACTAGGCCATCTTCTG  150

seq1  ATACATATGCAGCTAGAGACACGAGATCTGGGGGTACTGGTTAGTTCGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATGCAGCTAGAGACACGAGATCTGGGGGTACTGGTTAGTTCGTA  200

seq1  CTGTTGTTACATCTATAAGGTTGCAGACCCCTTTAGCTCCTTGGATACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTACATCTATAAGGTTGCAGACCCCTTTAGCTCCTTGGATACAT  250

seq1  TCTGTAGCTCCTCCATTGGGGGCCCTGTTTTCCATCCAATAGCTGACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGCTCCTCCATTGGGGGCCCTGTTTTCCATCCAATAGCTGACTGT  300

seq1  GAGCATCCACTTCTGTGTTTGCTAGGCCCCAGCATAGCCTCACAAGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCCACTTCTGTGTTTGCTAGGCCCCAGCATAGCCTCACAAGAGAC  350

seq1  AACTATATCTGGGTCGTTTCAGCAAAATCTTGCTAGTATATGCATGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATCTGGGTCGTTTCAGCAAAATCTTGCTAGTATATGCATGAGTA  400

seq1  TTATGTAGTAAGCGGCCTCTTTTTAGAAATTCTTGGATCTTTAGGAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGTAAGCGGCCTCTTTTTAGAAATTCTTGGATCTTTAGGAGCTT  450

seq1  CCCTTCAAGACAGAATGTATTACTTTGACAAAATTACTATCTAACAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAAGACAGAATGTATTACTTTGACAAAATTACTATCTAACAGGGG  500

seq1  AAGGGAGAAGTTAGAAGAGGAAGAGAAAGGAAAGTGAATGGGGCACTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGAAGTTAGAAGAGGAAGAGAAAGGAAAGTGAATGGGGCACTGAG  550

seq1  TTCTATGGTGACCTGCTCAAGTGCTACAGATTATACCCATTTCCAAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGGTGACCTGCTCAAGTGCTACAGATTATACCCATTTCCAAAATT  600

seq1  AAAAAAAAAAAGATGAATTTCTGTTTTGAACCAAATTGTATGAGGTTTGT  650
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAAAAAAAAAGATGAATTTCTGTTTTGAACCAAATTGTATGAGGTTTGT  649

seq1  TGTTGTGGTTCTTGCCTTTATGTAATGATTTGCTCACCCAAAAGATTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGGTTCTTGCCTTTATGTAATGATTTGCTCACCCAAAAGATTGTA  699

seq1  GTCTTCAGTCTTTTCCCTTAGACTACAATGCAAAGCTAAGTAGAATTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTCTTCAGTCTTTTCCCTTAGACTACAATGCAAAGCTAAGTAG-ATTTAT  748

seq1  GGAGAGGATTCCCTGGGTCTAGTCTCTCTGTGAGGAAGACCCAGGAGAGC  800
      |||||||| ||||||||||||||||||||||||||||||||   ||||||
seq2  GGAGAGGA-TCCCTGGGTCTAGTCTCTCTGTGAGGAAGACC--AGAGAGC  795

seq1  TCCCACTCTCTGGGAAGAAAAGCTGCCAACACAGATAGAGACAGCCAAGG  850
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  TCCCACTCTCTGGGAAGAAAAGCTGCCAACACAGATAGAGACAGC--AGG  843

seq1  CAAACCTTCATCACCAGCCGAGCAGTCTCTGTTGAACCAACACTTAAAAC  900
      ||||||||||||| ||| ||||||||||||| |||  ||  || ||||||
seq2  CAAACCTTCATCA-CAG-CGAGCAGTCTCTG-TGA--CA--ACCTAAAAC  886

seq1  TGATTGGTGGTTATGAGTAGTGGTGTGGCTACAACATT  938
      ||| |||||  ||   |||| |||| ||||||||||||
seq2  TGAATGGTG--TAGAGGTAGGGGTG-GGCTACAACATT  921