BAC Information

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BAC

Clone NameB6Ng01-032C03
Chromosome5 (Build37)
Map Location 8,327,030 - 8,425,006
singlet/doubletdoublet
Overlap geneAdam22, Dbf4, Slc25a40
Upstream geneLOC242823, LOC667767, EG546855, Steap4, Sri, LOC433840
Downstream geneGm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik, Dmtf1, LOC654361, 9330182L06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032C03.bB6Ng01-032C03.g
ACCDH861557DH861558
length1,1391,077
definitionDH861557|Mus musculus domesticus DNA, BAC clone: B6Ng01-032C03, 5' end.DH861558|Mus musculus domesticus DNA, BAC clone: B6Ng01-032C03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,327,030 - 8,328,176)(8,423,924 - 8,425,006)
sequence
gaattcttaaaatgccttctgcaaaactacaacccaaaggatgaatgaac
tcttgtataatctgattatagataatctggcttactgactgttttgaagg
aacgttacataatgattccttttcttcaatttcaacctaaaaataagtat
aattaaatctattctgcaactgatatgcagctacacattttcttgtagta
aaagaaaaaaattttttctttgttccagagtccttgaattccttcatgag
agaagaacccaaagcttttaaaaagcaaattcaatttctactttccttct
tcctaaaccaatagagcctcagcagtgagataaactgaacccatgaaatc
aataaaaaaaataaaataaaataaaaaattctacttaaaaattaggtaga
aaaaaactgttttttacagaatagaaaaaatagctactaacacactttat
actcaactacagagccactttcacattatttccactgtcattttatttac
aatagctcgagaatgaaatcaacctatatatgtaccaagagatggacgga
taaaaaaatacaacacctatgtacaatacaatgttgctaagttgtaaaga
aaaattacatcataaaatttgcataaatgaatggaactagaaaaaaaagt
atactgaataaggtaactcctcaggcccaggaagacaaatgctcttttct
ctcatatgcagatcatgccttcagcccttctcttttgtgtgtttaacttg
aagcacaagcataaaccaggaaactagatacagctttgggaggtggttgc
aagatggaaagcaggagattagctctaggtaaaactaaaatagggaagtt
gggtgaccagggattaaacgggggagtagagggagggctcaccttgagaa
gttaaaccacatagacgtttcctatctcacaacccagctaaaagtataac
tggagggacagagaaaacaggtgaaacttaaaatgccgtggggagtggat
aatcctgcagttatgaattaaatggggatgagggcagggcacatggagag
ggcagtggtggagtaggttatgcaaaattaatgatgtgttggaaaagcct
acggacctactattggttagctagtttcaaacatacttt
gaattcaaagccagcctaggctagacagtaagccccaggctaggttggac
tacaagggagactgtctcaaaacaagaaacaagaacataaaccacattca
tttagtcctgattactgacaggatgtgtagagacttctgtcttcatacaa
ccaaactcttcttcctgtggctgctgtaaaacttgggttccatggggtac
taggagttgactaaaaacaaaaaaacaaaaaaacactagtacctaggtgg
tgagtagatgttttgcttattcatagtttggaattataccttacatgaca
cataatgagtctaacatggttccaactctttgattgtcttatctcagaag
aaatataaatcacctttcacaagagcataaaacaacttccagttttattt
tccaaagaaacatgattacatcttttccaaattctgaaaacatcaaagag
agagagagagagaagagagaggaagaaagaaattaagaaaaagaaaacaa
ccccctttcccttcggccacctcttcctctccatcatttctttcttcagt
gtgctccaccatagaggtcaggtccacaggttatctattacttagctaga
ttaccactcaaattgtaattacctctattatcattctaactactcttaag
gaagtgggtggcacctcccaagccaccacagatgcctatagttcaggttt
taaccggtttgaactcggttggggacgaagctgagtcaagtcatcaacat
gacagtaattagaatttttcagttccaggcttactgcttccaagcgcatt
ccccttagtccccctaacagctaagaaccagtactctcttcacagactaa
atcggagcctcggattatccaattcctagattagctgggagctgggacca
ccaattctgtaaaaaattccattcctccccaccattattaagatttgttc
ccagtctcttcaactcagcttgctctccctcttctcactcgcactgcctc
atcccctgactctccacttcatctcacaagctctactcaggattcccctt
accctcggtggctttaattctactctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_8327030_8328176
seq2: B6Ng01-032C03.b_48_1186

seq1  GAATTCTTAAAATGCCTTCTGCAAAACTACAACCCAAAGGATGAATGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAATGCCTTCTGCAAAACTACAACCCAAAGGATGAATGAAC  50

seq1  TCTTGTATAATCTGATTATAGATAATCTGGCTTACTGACTGTTTTGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTATAATCTGATTATAGATAATCTGGCTTACTGACTGTTTTGAAGG  100

seq1  AACGTTACATAATGATTCCTTTTCTTCAATTTCAACCTAAAAATAAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTACATAATGATTCCTTTTCTTCAATTTCAACCTAAAAATAAGTAT  150

seq1  AATTAAATCTATTCTGCAACTGATATGCAGCTACACATTTTCTTGTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATCTATTCTGCAACTGATATGCAGCTACACATTTTCTTGTAGTA  200

seq1  AAAGAAAAAAATTTTTTCTTTGTTCCAGAGTCCTTGAATTCCTTCATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAAATTTTTTCTTTGTTCCAGAGTCCTTGAATTCCTTCATGAG  250

seq1  AGAAGAACCCAAAGCTTTTAAAAAGCAAATTCAATTTCTACTTTCCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAACCCAAAGCTTTTAAAAAGCAAATTCAATTTCTACTTTCCTTCT  300

seq1  TCCTAAACCAATAGAGCCTCAGCAGTGAGATAAACTGAACCCATGAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAACCAATAGAGCCTCAGCAGTGAGATAAACTGAACCCATGAAATC  350

seq1  AATAAAAAAAATAAAATAAAATAAAAAATTCTACTTAAAAATTAGGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAAAATAAAATAAAATAAAAAATTCTACTTAAAAATTAGGTAGA  400

seq1  AAAAAACTGTTTTTTACAGAATAGAAAAAATAGCTACTAACACACTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTGTTTTTTACAGAATAGAAAAAATAGCTACTAACACACTTTAT  450

seq1  ACTCAACTACAGAGCCACTTTCACATTATTTCCACTGTCATTTTATTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACTACAGAGCCACTTTCACATTATTTCCACTGTCATTTTATTTAC  500

seq1  AATAGCTCGAGAATGAAATCAACCTATATATGTACCAAGAGATGGACGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTCGAGAATGAAATCAACCTATATATGTACCAAGAGATGGACGGA  550

seq1  TAAAAAAATACAACACCTATGTACAATACAATGTTGCTAAGTTGTAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATACAACACCTATGTACAATACAATGTTGCTAAGTTGTAAAGA  600

seq1  AAAATTACATCATAAAATTTGCATAAATGAATGGAACTAGAAAAAAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACATCATAAAATTTGCATAAATGAATGGAACTAGAAAAAAAAGT  650

seq1  ATACTGAATAAGGTAACTCCTCAGGCCCAGGAAGACAAATGCTCTTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAATAAGGTAACTCCTCAGGCCCAGGAAGACAAATGCTCTTTTCT  700

seq1  CTCATATGCAGATCATGCCTTCAGCCCTTCTCTTTTGTGTGTTTAACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATGCAGATCATGCCTTCAGCCCTTCTCTTTTGTGTGTTTAACTTG  750

seq1  AAGCACAAGCATAAACCAGGAAACTAGATACAGCTTTGGGAGGTGGTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAAGCATAAACCAGGAAACTAGATACAGCTTTGGGAGGTGGTTGC  800

seq1  AAGATGGAAAGCAGGAGATTAGCTCTAGGTAAAACTAAAATAGGGAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGAAAGCAGGAGATTAGCTCTAGGTAAAACTAAAATAGGGAAGTT  850

seq1  GGGTGACCAGGGATTAAACGGGGGAGTAGAGGGAGGGCTCACCTTGAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACCAGGGATTAAACGGGGGAGTAGAGGGAGGGCTCACCTTGAGAA  900

seq1  GTTAAACCACATAGACGTTCCCTATCTCACAACCCAGCTAAAAGGTAATA  950
      ||||||||||||||||||| ||||||||||||||||||||||||   |||
seq2  GTTAAACCACATAGACGTTTCCTATCTCACAACCCAGCTAAAAG--TATA  948

seq1  ACTGGAGGGACAGAAGAAAACAGGTGAAACTTAAAATGCCGT-GGGAGTG  999
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  ACTGGAGGGACAG-AGAAAACAGGTGAAACTTAAAATGCCGTGGGGAGTG  997

seq1  GATAATCCTGCAAGTTAATGAATTAAATGGGGATGAGGGCAGGGCACAGG  1049
      ||||||||||| |||| ||||||||||||||||||||||||||||||| |
seq2  GATAATCCTGC-AGTT-ATGAATTAAATGGGGATGAGGGCAGGGCACATG  1045

seq1  GAGAAGAGCAGT-GTGGAGTAGGTTATGCAAAATTAATGATGTG-TGAAA  1097
      ||| || ||||| ||||||||||||||||||||||||||||||| || ||
seq2  GAG-AGGGCAGTGGTGGAGTAGGTTATGCAAAATTAATGATGTGTTGGAA  1094

seq1  AAGCCTACAGAAACCTACTAATGAGTAAGCTAGTTCCAAAACATAACTTT  1147
      |||||||| |  |||||||| || || |||||||| | |||||| |||||
seq2  AAGCCTACGG--ACCTACTATTG-GTTAGCTAGTTTC-AAACAT-ACTTT  1139

seq1: chr5_8423924_8425006
seq2: B6Ng01-032C03.g_64_1140 (reverse)

seq1  CAGAGTAGAATTAAAGCCA-CGAGGGAAGGGGGAATGCCTTGGAGTAGAG  49
      ||||||||||||||||||| |||||| | ||||||| |||  ||||||||
seq2  CAGAGTAGAATTAAAGCCACCGAGGGTAAGGGGAAT-CCT--GAGTAGAG  47

seq1  CTTGTGAGATGAAGTGGAGAGTCAGGGGATGAGGCAGTGCGAGTGAGGAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTGTGAGATGAAGTGGAGAGTCAGGGGATGAGGCAGTGCGAGTGAGAAG  97

seq1  AGGGAGAGCAAGCTGAGTTGGAAGAGACTGGGAACAAATCTTAATAATGG  149
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGGGAGAGCAAGCTGAGTT-GAAGAGACTGGGAACAAATCTTAATAATGG  146

seq1  TGGGGAGGAATGGAATTTTTTTACAGAATTGGTGGTCCCAGCTTCCCAGC  199
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  TGGGGAGGAATGGAA-TTTTTTACAGAATTGGTGGTCCCAGC-TCCCAGC  194

seq1  TAATCTAGGAATTGGATAATTCCGAGGCTCCGATTTAGTCTGTGAAGAGA  249
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAATCTAGGAATTGGATAA-TCCGAGGCTCCGATTTAGTCTGTGAAGAGA  243

seq1  GTACTGGTTCTTAGCTGTTAGGGGGACTAAGGGGAATGCGCTTGGAAGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGTTCTTAGCTGTTAGGGGGACTAAGGGGAATGCGCTTGGAAGCA  293

seq1  GTAAGCCTGGAACTGAAAAATTCTAATTACTGTCATGTTGATGACTTGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCCTGGAACTGAAAAATTCTAATTACTGTCATGTTGATGACTTGAC  343

seq1  TCAGCTTCGTCCCCAACCGAGTTCAAACCGGTTAAAACCTGAACTATAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCGTCCCCAACCGAGTTCAAACCGGTTAAAACCTGAACTATAGG  393

seq1  CATCTGTGGTGGCTTGGGAGGTGCCACCCACTTCCTTAAGAGTAGTTAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTGGTGGCTTGGGAGGTGCCACCCACTTCCTTAAGAGTAGTTAGA  443

seq1  ATGATAATAGAGGTAATTACAATTTGAGTGGTAATCTAGCTAAGTAATAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATAGAGGTAATTACAATTTGAGTGGTAATCTAGCTAAGTAATAG  493

seq1  ATAACCTGTGGACCTGACCTCTATGGTGGAGCACACTGAAGAAAGAAATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTGTGGACCTGACCTCTATGGTGGAGCACACTGAAGAAAGAAATG  543

seq1  ATGGAGAGGAAGAGGTGGCCGAAGGGAAAGGGGGTTGTTTTCTTTTTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAGGAAGAGGTGGCCGAAGGGAAAGGGGGTTGTTTTCTTTTTCTT  593

seq1  AATTTCTTTCTTCCTCTCTCTTCTCTCTCTCTCTCTCTTTGATGTTTTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTTCTTCCTCTCTCTTCTCTCTCTCTCTCTCTTTGATGTTTTCA  643

seq1  GAATTTGGAAAAGATGTAATCATGTTTCTTTGGAAAATAAAACTGGAAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGGAAAAGATGTAATCATGTTTCTTTGGAAAATAAAACTGGAAGT  693

seq1  TGTTTTATGCTCTTGTGAAAGGTGATTTATATTTCTTCTGAGATAAGACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGCTCTTGTGAAAGGTGATTTATATTTCTTCTGAGATAAGACA  743

seq1  ATCAAAGAGTTGGAACCATGTTAGACTCATTATGTGTCATGTAAGGTATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGAGTTGGAACCATGTTAGACTCATTATGTGTCATGTAAGGTATA  793

seq1  ATTCCAAACTATGAATAAGCAAAACATCTACTCACCACCTAGGTACTAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAAACTATGAATAAGCAAAACATCTACTCACCACCTAGGTACTAGT  843

seq1  GTTTTTTTGTTTTTTTGTTTTTAGTCAACTCCTAGTACCCCATGGAACCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTGTTTTTTTGTTTTTAGTCAACTCCTAGTACCCCATGGAACCC  893

seq1  AAGTTTTACAGCAGCCACAGGAAGAAGAGTTTGGTTGTATGAAGACAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTACAGCAGCCACAGGAAGAAGAGTTTGGTTGTATGAAGACAGAA  943

seq1  GTCTCTACACATCCTGTCAGTAATCAGGACTAAATGAATGTGGTTTATGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTACACATCCTGTCAGTAATCAGGACTAAATGAATGTGGTTTATGT  993

seq1  TCTTGTTTCTTGTTTTGAGACAGTCTCCCTTGTAGTCCAACCTAGCCTGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTCTTGTTTTGAGACAGTCTCCCTTGTAGTCCAACCTAGCCTGG  1043

seq1  GGCTTACTGTCTAGCCTAGGCTGGCTTTGAATTC  1083
      ||||||||||||||||||||||||||||||||||
seq2  GGCTTACTGTCTAGCCTAGGCTGGCTTTGAATTC  1077