BAC Information

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BAC

Clone NameB6Ng01-032I24
Chromosome5 (Build37)
Map Location 19,398,810 - 19,399,570
singlet/doubletsinglet
Overlap geneMagi2
Upstream gene4921504A21Rik
Downstream geneLOC100041850, Phtf2, LOC622367, Tmem60, Rsbn1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032I24.bB6Ng01-032I24.g
ACCDH861860DH861861
length1,201761
definitionDH861860|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I24, 5' end.DH861861|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaaaagtcaagaataaaataaacagcccaattaaaattaaaaa
tggggccaaagacgtagacagataccttattaatgaagacatgtagcagg
tggcagaataacatacgaatagatggagcacattgtatatgctcacacaa
cttgcacatggatatttatagtagcttttttgacatctgagaaaactcag
aacaaaaacaaaaacaaaaaacaaaccattcattcctttaggttgatgga
caaatgtatacagccattttggaatattagtcactgctataagtgaaatg
agcaaccagccaatgaaaattcatatagggaaacttatgtacatactagt
aagtggttgatatatacaagggaaaagctacatgctacatgacttcagtt
atatgatgtttgagaaaggccaaaactagagatgctttactggccactgg
aacctccgcagtggtgggaaagaattgaaggcaggaagaggcaacctaca
gatgatttccagggtagaggagttagttcctatgataagataatgaagtt
gtgcagtagtttgaactggtaggatgcatatgaagaatgaatgccaatgt
aagatgtatgtcctaaatgaaagaacaaacagaggcctgtctctaactga
taaattaatagtgtatggggaaagtgtagtcagaagatctcttcaccttt
tttatacaccttgcagtgaacccagacttctctaaaaataagctctaata
agaatatggaatcaagttcaacatccctagttcttgcagaaaggcaaatt
aacactgcagtgatatacctttatacaaccattaaaacagttaaaataag
aagcataattattaataacaaagaaggaagttggatcgctcatacatcag
tcatgagatagttaatagtgtggtcactgtttatacacatgtgcatgttt
gtgtgtgtgtatacatttatcatgcaaacaaagaaacaaactcctagtat
agatctcagaggaatttcaaggtatggttcacataaggtctttatgtgac
tgtagcaagcagtttgtcatgggcccctggtagagatacatgatatctat
ctttcacggttaatgataaaccaacctatgtgtatgtttttactcaaaag
caaccgggaatgaaaccatatcaatagtcagggaattattctatagatac
a
gaattcctatctacctttctgctgattcacaggaacacttagctcaaatg
aattaagtgactcttgtaaacaggaaagaaggagaataaagtatggcttt
tgaaagaaggagtaagatatggacagacactagaggagcaattatgtaag
taaatgatatgcttttcaatcttaaaaaagaaaaccaataacagactacc
aaaggaggctataaacatatcctgagagatctgtaagtgggacagaggca
gcatctttgacatgctggcaaaacagacacttcatcttccccagctttta
acagctcttcaatcctgactgtctaaaattgtaaatattaacgaagaatg
catacttttcactactggaacattaaaaagaaaaaacaaaagaattggtt
tctaaaagaaaatgattcaataccaattttgtttataaattcaggctaca
taaacctaattgacttttaaataaactaacttggaggagaaaaagaaaag
cattcctttgatgtaaatttttatctcatttgaagataataagtttcatt
ttgtttccatttgaaaacattgcctaataacaaaactctacgaggaaaat
tttatttagtttgatttttctgcaacttttatatttaatgaacacaaata
cgagtgtaactagaggataagaaagagctttttcctctaacagcaaatat
aaattaaaatacctatttaatttttatacgtgtgtgtgtgtgtgtgtgtg
tgtgtgagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_19398810_19399570
seq2: B6Ng01-032I24.g_67_827

seq1  GAATTCCTATCTACCTTTCTGCTGATTCACAGGAACACTTAGCTCAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATCTACCTTTCTGCTGATTCACAGGAACACTTAGCTCAAATG  50

seq1  AATTAAGTGACTCTTGTAAACAGGAAAGAAGGAGAATAAAGTATGGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTGACTCTTGTAAACAGGAAAGAAGGAGAATAAAGTATGGCTTT  100

seq1  TGAAAGAAGGAGTAAGATATGGACAGACACTAGAGGAGCAATTATGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAGGAGTAAGATATGGACAGACACTAGAGGAGCAATTATGTAAG  150

seq1  TAAATGATATGCTTTTCAATCTTAAAAAAGAAAACCAATAACAGACTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGATATGCTTTTCAATCTTAAAAAAGAAAACCAATAACAGACTACC  200

seq1  AAAGGAGGCTATAAACATATCCTGAGAGATCTGTAAGTGGGACAGAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGGCTATAAACATATCCTGAGAGATCTGTAAGTGGGACAGAGGCA  250

seq1  GCATCTTTGACATGCTGGCAAAACAGACACTTCATCTTCCCCAGCTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTGACATGCTGGCAAAACAGACACTTCATCTTCCCCAGCTTTTA  300

seq1  ACAGCTCTTCAATCCTGACTGTCTAAAATTGTAAATATTAACGAAGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCTTCAATCCTGACTGTCTAAAATTGTAAATATTAACGAAGAATG  350

seq1  CATACTTTTCACTACTGGAACATTAAAAAGAAAAAACAAAAGAATTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTTTCACTACTGGAACATTAAAAAGAAAAAACAAAAGAATTGGTT  400

seq1  TCTAAAAGAAAATGATTCAATACCAATTTTGTTTATAAATTCAGGCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAGAAAATGATTCAATACCAATTTTGTTTATAAATTCAGGCTACA  450

seq1  TAAACCTAATTGACTTTTAAATAAACTAACTTGGAGGAGAAAAAGAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTAATTGACTTTTAAATAAACTAACTTGGAGGAGAAAAAGAAAAG  500

seq1  CATTCCTTTGATGTAAATTTTTATCTCATTTGAAGATAATAAGTTTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTTGATGTAAATTTTTATCTCATTTGAAGATAATAAGTTTCATT  550

seq1  TTGTTTCCATTTGAAAACATTGCCTAATAACAAAACTCTACGAGGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCCATTTGAAAACATTGCCTAATAACAAAACTCTACGAGGAAAAT  600

seq1  TTTATTTAGTTTGATTTTTCTGCAACTTTTATATTTAATGAACACAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAGTTTGATTTTTCTGCAACTTTTATATTTAATGAACACAAATA  650

seq1  CGAGTGTAACTAGAGGATAAGAAAGAGCTTTTTCCTCTAACAGCAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGTAACTAGAGGATAAGAAAGAGCTTTTTCCTCTAACAGCAAATAT  700

seq1  AAATTAAAATACCTATTTAATTTTTATACGTGTGTGTGTGTGTGTGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAATACCTATTTAATTTTTATACGTGTGTGTGTGTGTGTGTGTG  750

seq1  TGTGTGAGAGA  761
      |||||||||||
seq2  TGTGTGAGAGA  761