BAC Information

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BAC

Clone NameB6Ng01-034I01
Chromosome5 (Build37)
Map Location 19,234,789 - 19,235,677
singlet/doubletsinglet
Overlap geneMagi2
Upstream gene4921504A21Rik
Downstream geneLOC100041850
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034I01.bB6Ng01-034I01.g
ACCDH863236DH863237
length8841,088
definitionDH863236|Mus musculus domesticus DNA, BAC clone: B6Ng01-034I01, 5' end.DH863237|Mus musculus domesticus DNA, BAC clone: B6Ng01-034I01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaattttcctatcagtgatcttaggaacaagatggaattattg
aagaattgttttcctcctccattaatgtcttactggcctctatgatcaaa
atgcttaactaatatttttaattctaaatataacttagaagtaagtacct
ggttttgcattcacattgttcattagctaaagaggtaatgaagaatatga
tggacttaaacagtatacaacttaaaatatttttgatggggccagaagaa
atactcagtggttaagagtgcttgcttggtcctcagcactaatagcaagt
atctcacaacaacctatagctcatcaatatgcacccaacagacatgttgt
acacactcacacaagcatacaaataaaaataaatagaagtaaaagaatga
agaacaaaattttaaagaaaaagatcatataataaattatctaaatggta
tttgttgaatgagcgaatcaatgtccaaaaattaaagtttttttggtcat
ttttgtacattatatgggaacctaaaataaatgatacaataagctagtag
cagctattgatagatattgatagagagtttagcaagttttccagtttaat
tattatgtagacataatgcattatttaaactttatcctctgcatagttat
tctataaaataaatacctacaaaaagataatggaccaatatttacctaca
atttatcttttcaattatttttaaaactttattttgggtttattaaggtg
tatgaatgattttgctcacttgcatgttttgagccattttgcctgggacc
tgtggagtcagagagggcagtagatcccgcttgaattgaaattgtagaca
gttgttagtgctatatgggtggtgggtattttat
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacatcagtcagaatggttaagatcaaaaattcaggtgacagc
agatgctggagaggatgtggagaaagaggaacgctcctccattgttggtg
ggattgcaagcttgtacaatcactctggaaatcagctcctcagaaaattg
gacgtagtactactggaggattccgcaatgcctctcctgggcatatatca
agaagatgtcccaaccggtaagaaggacacatgctccactatgttcatag
cagccttatttataatagccagaagctggaaagaacccagattctcctca
tcagaggaatggatacagaaaatgtggtacatttacacaatggagtacta
ctcagctattaaaaagaatgaatttatgaaattcctaggcaaatggatgg
acctggagggcatcatcctgagtgaggtaacacaatcacaaaagaactca
aatgatatgtactcactgataagtggatattagcccagaaacttagtata
cccgagatataagatacaatttgcaaaacacatgaaactgaaagaacgaa
gaccaaattgtggacacttttgcctcttcttagaattgggaacaaaacac
ccatggaaggagttacagagacaaagtttggagttgagacaaaaggatgg
gccatctagagactgccatatccagagatccatcccataattagcctcca
acgatgacaccattgcatacactagcaagtgttggctgaatggaccctga
ttaagctgtctccttgtgagactaggccggagcctagcaaactcataagt
agatgctcacagtcagctattgggatgaagcacagggcccccaatggagg
agctgagaaagtattcagggagctaagaaatatgcaaccctgtaggtcaa
cacataatgaagtaccagtatcctggtgcctttgactctagccgctttgc
atcgaagatggcctatccgccatctctggataagaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_19234789_19235677
seq2: B6Ng01-034I01.b_43_926

seq1  GAATTCTGAATTTTCCTATCAGTGATCTTAGGAACAAGATGGAATTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATTTTCCTATCAGTGATCTTAGGAACAAGATGGAATTATTG  50

seq1  AAGAATTGTTTTCCTCCTCCATTAATGTCTTACTGGCCTCTATGATCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGTTTTCCTCCTCCATTAATGTCTTACTGGCCTCTATGATCAAA  100

seq1  ATGCTTAACTAATATTTTTAATTCTAAATATAACTTAGAAGTAAGTACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAACTAATATTTTTAATTCTAAATATAACTTAGAAGTAAGTACCT  150

seq1  GGTTTTGCATTCACATTGTTCATTAGCTAAAGAGGTAATGAAGAATATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGCATTCACATTGTTCATTAGCTAAAGAGGTAATGAAGAATATGA  200

seq1  TGGACTTAAACAGTATACAACTTAAAATATTTTTGATGGGGCCAGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTAAACAGTATACAACTTAAAATATTTTTGATGGGGCCAGAAGAA  250

seq1  ATACTCAGTGGTTAAGAGTGCTTGCTTGGTCCTCAGCACTAATAGCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAGTGGTTAAGAGTGCTTGCTTGGTCCTCAGCACTAATAGCAAGT  300

seq1  ATCTCACAACAACCTATAGCTCATCAATATGCACCCAACAGACATGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACAACAACCTATAGCTCATCAATATGCACCCAACAGACATGTTGT  350

seq1  ACACACTCACACAAGCATACAAATAAAAATAAATAGAAGTAAAAGAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTCACACAAGCATACAAATAAAAATAAATAGAAGTAAAAGAATGA  400

seq1  AGAACAAAATTTTAAAGAAAAAGATCATATAATAAATTATCTAAATGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAATTTTAAAGAAAAAGATCATATAATAAATTATCTAAATGGTA  450

seq1  TTTGTTGAATGAGCGAATCAATGTCCAAAAATTAAAGTTTTTTTGGTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAATGAGCGAATCAATGTCCAAAAATTAAAGTTTTTTTGGTCAT  500

seq1  TTTTGTACATTATATGGGAACCTAAAATAAATGATACAATAAGCTAGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTACATTATATGGGAACCTAAAATAAATGATACAATAAGCTAGTAG  550

seq1  CAGCTATTGATAGATATTGATAGAGAGTTTAGCAAGTTTTCCAGTTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATTGATAGATATTGATAGAGAGTTTAGCAAGTTTTCCAGTTTAAT  600

seq1  TATTATGTAGACATAATGCATTATTTAAACTTTATCCTCTGCATAGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGTAGACATAATGCATTATTTAAACTTTATCCTCTGCATAGTTAT  650

seq1  TCTATAAAATAAATACCTACAAAAAGATAATGGACCAATATTTACCTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAATAAATACCTACAAAAAGATAATGGACCAATATTTACCTACA  700

seq1  ATTTATCTTTTCAATTATTTTTAAAACTTTATTTTGGGTTTATTAAGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTTTTCAATTATTTTTAAAACTTTATTTTGGGTTTATTAAGGTG  750

seq1  TATGAATGATTTTGCTCACTTGCATGTTTTTGAGCCATTTTGCCTGGGAC  800
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATGAATGATTTTGCTCACTTGCATG-TTTTGAGCCATTTTGCCTGGGAC  799

seq1  CTGTGGAGGTCAGAAGAGGGCAGTAGATCCCGCTTGGAATTGAAATTGTA  850
      ||||||| ||||| ||||||||||||||||||||| ||||||||||||||
seq2  CTGTGGA-GTCAG-AGAGGGCAGTAGATCCCGCTT-GAATTGAAATTGTA  846

seq1  GACAGTTGTTAGGTGCTATATGGGTGGTGGGTATTTAAT  889
      ||||||||||| |||||||||||||||||||||||| ||
seq2  GACAGTTGTTA-GTGCTATATGGGTGGTGGGTATTTTAT  884