BAC Information

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BAC

Clone NameB6Ng01-035A15
Chromosome5 (Build37)
Map Location 73,505,180 - 73,603,741
singlet/doubletdoublet
Overlap geneFryl
Upstream geneGabrb1, Commd8, Atp10d, Corin, Nfxl1, Zar1, EG545758, Cnga1, LOC384275, Npal1, Txk, Tec, Slain2, Slc10a4, LOC667127
Downstream geneOciad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik, LOC627733, Dcun1d4, BC031901, Sgcb, Spata18, Usp46, 2700023E23Rik, Rasl11b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035A15.bB6Ng01-035A15.g
ACCDH863617DH863618
length344902
definitionDH863617|Mus musculus domesticus DNA, BAC clone: B6Ng01-035A15, 5' end.DH863618|Mus musculus domesticus DNA, BAC clone: B6Ng01-035A15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,505,180 - 73,505,523)(73,602,832 - 73,603,741)
sequence
ttaaaaatgctgtgtttactttagcagttctatgttgttttaaggtttag
aatagcagacatctactacaaatagtttaaagcaaaaggatggaggatgt
ttgagaaacactagacgtcacacaaggttgtgcacataacaactgggcag
aattgagactggaaaatccaaacaccctcaatagctctcaatcgcaattc
cttgttccatggcaggatccaagttgaccccaaatgtcaacctcaccccc
acccctaccccccagggtggtcttctgtttgctactaaagcaatgaaagt
tacaagtgaaacagaaagacagggagggagggagagaggaaggg
gaattctggtgagtctcgtggggttaggagggggtgcgtccaggggagtc
tctttaagaggagacaaatctcaggtgtagtgccgcaggcaccttgagta
gaaccttccagaagtgaccttattccaccgaaaagccttacttgcctttt
gaagccatctttacatacacttcagcacacattaaataacgcctgtctct
ccacacagctttgacaaaagtgtgtgtgtatggcaggcagtatccgcgtt
ctggggaagccagaacactaggtgttcagttttcacgtggcagagagtga
ccaataaagccataaggacggagcgtattggcatgaacctgtgcttttcc
cggccctaggacggcatcggaaggatcaccctcccgactgatttctagat
taacagtgatcctttgcgtattagtaaggcaggtttactcggccctcaag
cgggattttgtttgtatatcagggccagtcagcaatgtttcttctgtgac
aagatgggacggttgctcgttagtgatagcctgcaaaatgactttatttt
ttgtttaaaaagaaaaaacccttctcggtttctgctcattcacaccttag
tcctctccttgtctcctttccccctctttcttcttctgaatgagtctgct
gctttgactgcattgtcgtgtcttagtattccctaaccgggccactgatg
acagctgtgtctgatgaggccatttttctggactcataatggaaattttt
tttgttgaggggtgacgtttgctgattttcttttacgtaagagttttcag
atattaaccttttcgttgctttggcctacctattgaattaaagaactgct
ttttgtctgtagtctttctgatgtaatgagggatgtgtgttatgaatttg
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_73505180_73505523
seq2: B6Ng01-035A15.b_50_393

seq1  TTAAAAATGCTGTGTTTACTTTAGCAGTTCTATGTTGTTTTAAGGTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGCTGTGTTTACTTTAGCAGTTCTATGTTGTTTTAAGGTTTAG  50

seq1  AATAGCAGACATCTACTACAAATAGTTTAAAGCAAAAGGATGGAGGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCAGACATCTACTACAAATAGTTTAAAGCAAAAGGATGGAGGATGT  100

seq1  TTGAGAAACACTAGACGTCACACAAGGTTGTGCACATAACAACTGGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAACACTAGACGTCACACAAGGTTGTGCACATAACAACTGGGCAG  150

seq1  AATTGAGACTGGAAAATCCAAACACCCTCAATAGCTCTCAATCGCAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGACTGGAAAATCCAAACACCCTCAATAGCTCTCAATCGCAATTC  200

seq1  CTTGTTCCATGGCAGGATCCAAGTTGACCCCAAATGTCAACCTCACCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCCATGGCAGGATCCAAGTTGACCCCAAATGTCAACCTCACCCCC  250

seq1  ACCCCTACCCCCCAGGGTGGTCTTCTGTTTGCTACTAAAGCAATGAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTACCCCCCAGGGTGGTCTTCTGTTTGCTACTAAAGCAATGAAAGT  300

seq1  TACAAGTGAAACAGAAAGACAGGGAGGGAGGGAGAGAGGAAGGG  344
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTGAAACAGAAAGACAGGGAGGGAGGGAGAGAGGAAGGG  344

seq1: chr5_73602832_73603741
seq2: B6Ng01-035A15.g_65_966 (reverse)

seq1  ACCAAAATTTTCATAACCACACATCCCCTTCATTACATCCAGAAAGACTA  50
      ||||||   ||||||| ||||||||||  ||||||||| |||||||||| 
seq2  ACCAAA---TTCATAA-CACACATCCC--TCATTACAT-CAGAAAGACT-  42

seq1  ACAGACAAAAAGCAGTTCTTTAATTCAATAGGTAGGCCAAAGCAACGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAAAAAGCAGTTCTTTAATTCAATAGGTAGGCCAAAGCAACGAAA  92

seq1  AGGTTAATATCTGAAAACTCTTACGTAAAAGAAAATCAGCAAACGTCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAATATCTGAAAACTCTTACGTAAAAGAAAATCAGCAAACGTCACC  142

seq1  CCTCAACAAAAAAAATTTCCATTATGAGTCCAGAAAAATGGCCTCATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACAAAAAAAATTTCCATTATGAGTCCAGAAAAATGGCCTCATCAG  192

seq1  ACACAGCTGTCATCAGTGGCCCGGTTAGGGAATACTAAGACACGACAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTGTCATCAGTGGCCCGGTTAGGGAATACTAAGACACGACAATG  242

seq1  CAGTCAAAGCAGCAGACTCATTCAGAAGAAGAAAGAGGGGGAAAGGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAAAGCAGCAGACTCATTCAGAAGAAGAAAGAGGGGGAAAGGAGAC  292

seq1  AAGGAGAGGACTAAGGTGTGAATGAGCAGAAACCGAGAAGGGTTTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGGACTAAGGTGTGAATGAGCAGAAACCGAGAAGGGTTTTTTCT  342

seq1  TTTTAAACAAAAAATAAAGTCATTTTGCAGGCTATCACTAACGAGCAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACAAAAAATAAAGTCATTTTGCAGGCTATCACTAACGAGCAACC  392

seq1  GTCCCATCTTGTCACAGAAGAAACATTGCTGACTGGCCCTGATATACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATCTTGTCACAGAAGAAACATTGCTGACTGGCCCTGATATACAAA  442

seq1  CAAAATCCCGCTTGAGGGCCGAGTAAACCTGCCTTACTAATACGCAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCCCGCTTGAGGGCCGAGTAAACCTGCCTTACTAATACGCAAAGG  492

seq1  ATCACTGTTAATCTAGAAATCAGTCGGGAGGGTGATCCTTCCGATGCCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGTTAATCTAGAAATCAGTCGGGAGGGTGATCCTTCCGATGCCGT  542

seq1  CCTAGGGCCGGGAAAAGCACAGGTTCATGCCAATACGCTCCGTCCTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGCCGGGAAAAGCACAGGTTCATGCCAATACGCTCCGTCCTTATG  592

seq1  GCTTTATTGGTCACTCTCTGCCACGTGAAAACTGAACACCTAGTGTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATTGGTCACTCTCTGCCACGTGAAAACTGAACACCTAGTGTTCTG  642

seq1  GCTTCCCCAGAACGCGGATACTGCCTGCCATACACACACACTTTTGTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCCAGAACGCGGATACTGCCTGCCATACACACACACTTTTGTCAA  692

seq1  AGCTGTGTGGAGAGACAGGCGTTATTTAATGTGTGCTGAAGTGTATGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTGGAGAGACAGGCGTTATTTAATGTGTGCTGAAGTGTATGTAA  742

seq1  AGATGGCTTCAAAAGGCAAGTAAGGCTTTTCGGTGGAATAAGGTCACTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTTCAAAAGGCAAGTAAGGCTTTTCGGTGGAATAAGGTCACTTC  792

seq1  TGGAAGGTTCTACTCAAGGTGCCTGCGGCACTACACCTGAGATTTGTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGTTCTACTCAAGGTGCCTGCGGCACTACACCTGAGATTTGTCTC  842

seq1  CTCTTAAAGAGACTCCCCTGGACGCACCCCCTCCTAACCCCACGAGACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAAGAGACTCCCCTGGACGCACCCCCTCCTAACCCCACGAGACTC  892

seq1  ACCAGAATTC  910
      ||||||||||
seq2  ACCAGAATTC  902