BAC Information

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BAC

Clone NameB6Ng01-035C18
Chromosome5 (Build37)
Map Location 124,599,314 - 124,600,168
singlet/doubletsinglet
Overlap genePitpnm2
Upstream geneSetd1b, Hpd, Psmd9, Wdr66, LOC100042824, Bcl7a, Mlxip, LOC673222, Il31, Lrrc43, B3gnt4, Diablo, Vps33a, Clip1, Zcchc8, Rsrc2, Kntc1, LOC100040005, Gpr109a, Gpr81, Denr, Ccdc62, Hip1r, Vps37b, Abcb9, Ogfod2, Arl6ip4
Downstream geneMphosph9, 2810006K23Rik, Cdk2ap1, Sbno1, Setd8, BC003324, LOC606492, 6330548G22Rik, 2900002H16Rik, Rpl32-ps5c, Tmed2, Ddx55, Eif2b1, Gtf2h3, 4432405B04Rik, Atp6v0a2, Atp6v0a2, Dnahc10, Ccdc92, Zfp664, 3110032G18Rik, Ncor2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035C18.bB6Ng01-035C18.g
ACCDH863714DH863715
length849532
definitionDH863714|Mus musculus domesticus DNA, BAC clone: B6Ng01-035C18, 5' end.DH863715|Mus musculus domesticus DNA, BAC clone: B6Ng01-035C18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcttgatatgagggactctggtaaatgagctttctagaagttt
aggtgtagtctgtttccagacaatagcacagctaacgatcttactctata
ggtggaagtgtaggctttcccagctgagcctggcttgagttcaggctctg
tggaacaagtgaatcttcctgggtattaattactacttgttttttgtttt
gtttgtttgtgttttgtttttctttttttaagatttatttatttattata
tataagtaaactgtagctgtcttcagacaccccggaagagggcatcagat
ctcattacagatggttgtgagccatcacgtggttgctgggatttgaattc
aggacctttggaagagtagtcagtgttcttacccactaagccgtctcttc
agccccctatgttttgtttgtcaagacaaggtttctctgtgtagctctgg
ctgtcctggaactcattctgtagacgtaactgctctcaaacttagagatt
ctcctgcctctgcctcctgagtgctgggatgaaagacatgcaccaccatg
cttgacccctcaatttcttacataagctagtttcttaaatggcagtgccc
tggaaagactcacaaaagaaactttcctgtttatagatgggaaatttgag
ccaaatttggaacttagcactcccacctctcaaggggtctgtctgctctt
agaaagctttgggcttctgatggggtcaggaggacccactatcagtatca
gatatgaagagcctttgctcgaccagagtgcaggggatagtggggaagac
agaagtcccattcatccagaacagggaggagcgcctgaggaagcgactc
tttagctggttccatctctcatggatggtgcaaccatcctctgctaccag
atgcggggtagtgggcatggggaaataaagggagtgggagaaaacccgcg
tcccgccacagttctggtgctctgggcaggcagacacgggaggactgttg
catgctttccacacgtcctgggtgggtgtctggctgtaggaagctacaga
cccagcccgtgggggaggacaaggggccgtcataggtgtctgggcctcat
ggaggccagagataacaggttctcagtctcgggcatcccagacacagctg
gacactgcaaaaaagctgagaacaaaatgggggcccctgggggtggctcg
gtcagccccccagggctgaaaggaggagagggcagggagagagggggtgc
tgggtggttcccacgtgggcgagaatccttggtcccgtccatggctagag
cacgggaagggcttccagcgggaggttagatgaggctctttagggggaaa
gcctatcccatcattcaagcacgtcagggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_124599314_124600168
seq2: B6Ng01-035C18.b_44_892 (reverse)

seq1  GAGTCGGCCTCCTCAGGCGCCTCCCTCCCTGTTCTGGATGAATGGGACTT  50
      ||||| || |||||||||||   |||||||||||||||||||||||||||
seq2  GAGTC-GCTTCCTCAGGCGC--TCCTCCCTGTTCTGGATGAATGGGACTT  47

seq1  CCTGTCTTCCCCCACTATCCCCTGCACTCTGGTCGAGCAAAGGCTCCTTC  100
       ||||||| |||||||||||||||||||||||||||||||||||| ||||
seq2  -CTGTCTT-CCCCACTATCCCCTGCACTCTGGTCGAGCAAAGGCT-CTTC  94

seq1  ATATCTGATACTGATAGTGGGTTCCTCCTGACCCCATCAGAAGCCCAAAG  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATATCTGATACTGATAGTGGG-TCCTCCTGACCCCATCAGAAGCCCAAAG  143

seq1  CTTTCTAGGAGCAGACAGACCCCCTGGGAGGTGGG-GTGCTAAGTTCCAA  199
      ||||||| ||||||||||||||| || |||||||| ||||||||||||||
seq2  CTTTCTAAGAGCAGACAGACCCCTTGAGAGGTGGGAGTGCTAAGTTCCAA  193

seq1  ATTTGGCTCAAATTTCCCATCTATAAACAGGAAAGTTTCTTTTGTGAGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCTCAAATTTCCCATCTATAAACAGGAAAGTTTCTTTTGTGAGTC  243

seq1  CTTCCAGGGCACTGCCATTTAAGAAACTAGCTTATGTAAGAAATTGAGGG  299
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGGCACTGCCATTTAAGAAACTAGCTTATGTAAGAAATTGAGGG  293

seq1  GTCAAGCATGGTGGTGCATGTCTTTCATCCCAGCACTCAGGAGGCAGAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGCATGGTGGTGCATGTCTTTCATCCCAGCACTCAGGAGGCAGAGG  343

seq1  CAGGAGAATCTCTAAGTTTGAGAGCAGTTACGTCTACAGAATGAGTTCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAATCTCTAAGTTTGAGAGCAGTTACGTCTACAGAATGAGTTCCA  393

seq1  GGACAGCCAGAGCTACACAGAGAAACCTTGTCTTGACAAACAAAACATAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCAGAGCTACACAGAGAAACCTTGTCTTGACAAACAAAACATAG  443

seq1  GGGGCTGAAGAGACGGCTTAGTGGGTAAGAACACTGACTACTCTTCCAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGAAGAGACGGCTTAGTGGGTAAGAACACTGACTACTCTTCCAAA  493

seq1  GGTCCTGAATTCAAATCCCAGCAACCACGTGATGGCTCACAACCATCTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGAATTCAAATCCCAGCAACCACGTGATGGCTCACAACCATCTGT  543

seq1  AATGAGATCTGATGCCCTCTTCCGGGGTGTCTGAAGACAGCTACAGTTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATCTGATGCCCTCTTCCGGGGTGTCTGAAGACAGCTACAGTTTA  593

seq1  CTTATATATAATAAATAAATAAATCTTAAAAAAAGAAAAACAAAACACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATATAATAAATAAATAAATCTTAAAAAAAGAAAAACAAAACACAA  643

seq1  ACAAACAAAACAAAAAACAAGTAGTAATTAATACCCAGGAAGATTCACTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAACAAAAAACAAGTAGTAATTAATACCCAGGAAGATTCACTT  693

seq1  GTTCCACAGAGCCTGAACTCAAGCCAGGCTCAGCTGGGAAAGCCTACACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCACAGAGCCTGAACTCAAGCCAGGCTCAGCTGGGAAAGCCTACACT  743

seq1  TCCACCTATAGAGTAAGATCGTTAGCTGTGCTATTGTCTGGAAACAGACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTATAGAGTAAGATCGTTAGCTGTGCTATTGTCTGGAAACAGACT  793

seq1  ACACCTAAACTTCTAGAAAGCTCATTTACCAGAGTCCCTCATATCAAGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTAAACTTCTAGAAAGCTCATTTACCAGAGTCCCTCATATCAAGAT  843

seq1  GAATTC  855
      ||||||
seq2  GAATTC  849