BAC Information

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BAC

Clone NameB6Ng01-037G05
Chromosome5 (Build37)
Map Location 15,185,656 - 15,185,869
singlet/doubletsinglet
Overlap genenone
Upstream geneSema3e, Pclo, ENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d, 4930572O03Rik
Downstream geneSpeer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1, LOC668121, Hgf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037G05.bB6Ng01-037G05.g
ACCDH865267DH865268
length884340
definitionDH865267|Mus musculus domesticus DNA, BAC clone: B6Ng01-037G05, 5' end.DH865268|Mus musculus domesticus DNA, BAC clone: B6Ng01-037G05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccactttatggggggggttatttgat
tttctgaagtccaccttcttgagttctttatatatgttgaatattagtcc
cctatctgatttgggataggtaaagatcctttcccaatctgttggtggtt
tttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttc
attagttcccatttgtcaattctcgatcttacaacacaagccattgctgt
tctgttcaggaattttccccctgtgcccatatcttcaatacttttcccca
ctttctcttctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataagtatggatcgattcg
cattcttctacatgataacaaccagttgtgccagccccaattgttgaaaa
tgttgtctttcttccactggatggttttagctccctgtagaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctgttccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
ttatccttgagaagactttttgctatcctaggtttttttgttattccaga
tgaatttgcagattgctctttctaattcgttgaagaattgagttggaatt
ttgatgggggattgcatttgaatctgtagattgctttttggcaagatagc
catttttacatgttgatcctggcaatccatgagcatgggagaatttccct
cttctgagatctttttttatttcttcttcagaaa

aatcatatttccataaaacatatatgctgtagcatacatacatacataca
tacatacatacatacatacatacacacatacacacatacacacatacaca
catacacacacacacacacacacatacacacatacacacatacacacata
cacacacacacacacacacatacacacatacacacatacacacatacata
catacacacatacacacatacacacatacaattggtttgtctgtttagtt
ttggttgggtttgaggtgtggttgttgttggtttgtttttgaaacagagt
ctgtctatgtagccctggctgtcatggaatttgctttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_15185656_15185869
seq2: B6Ng01-037G05.g_80_413

seq1  TATTTCCATAAAACATATATGCTGTAGCATACAT----------------  34
      ||||||||||||||||||||||||||||||||||                
seq2  TATTTCCATAAAACATATATGCTGTAGCATACATACATACATACATACAT  50

seq1  --------------------------------------------------  34
                                                        
seq2  ACATACATACATACATACACACATACACACATACACACATACACACATAC  100

seq1  --------------------------------ACATACACACATACACAC  52
                                      ||||||||||||||||||
seq2  ACACACACACACACACACATACACACATACACACATACACACATACACAC  150

seq1  ACACACACATACACATATACACAT----------------------ATAC  80
      ||||||||| ||||||| ||||||                      ||||
seq2  ACACACACACACACATACACACATACACACATACACACATACATACATAC  200

seq1  ACACATACACACATACACACATACAATTGGTTTGTCTGTTTAGTTTTGGT  130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACACATACACACATACAATTGGTTTGTCTGTTTAGTTTTGGT  250

seq1  TGGGTTTGAGGTGTGGTTGTTGTTGGATTGTTTTTGAAACAGAGTCTGTC  180
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGGGTTTGAGGTGTGGTTGTTGTTGGTTTGTTTTTGAAACAGAGTCTGTC  300

seq1  TATGTAGCCTTGGCTGTCATGGAATTTGCTTTGT  214
      ||||||||| ||||||||||||||||||||||||
seq2  TATGTAGCCCTGGCTGTCATGGAATTTGCTTTGT  334


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