BAC Information

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BAC

Clone NameB6Ng01-038G16
Chromosome5 (Build37)
Map Location 7,792,215 - 7,792,936
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042651, 4921511H03Rik, LOC242823
Downstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038G16.bB6Ng01-038G16.g
ACCDH865981DH865982
length1,1641,010
definitionDH865981|Mus musculus domesticus DNA, BAC clone: B6Ng01-038G16, 5' end.DH865982|Mus musculus domesticus DNA, BAC clone: B6Ng01-038G16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattccattgatcttcctgcctgtctctgtaccaataccataca
gtttttatgactattgctctgtaatgtaacttgaggtaggggatggtgat
tcttccagaagttcttttattgtcaagactagtttttgctatcctgggtg
ttttagttattccaaatgaatttgcaaaatgctctttctaactctatgaa
gatttgagttgaaattttgatggggattgcatcgaatctgtagattgctt
ttggcaagatagtcatttttactatattaatcctgccaatccatgagcat
gggggatctttccatcttctgagatcttctttggtttctttcttcagaga
atgaagttattttcttacagatctttcacttgctttgatagagtcacacc
aaggtgttttacattatttgtggtttttgtgaagggtgttgtttccctaa
cttctttctcagtctgtttatcctttgagaagaggaaggctacagattta
agttaactttgtatccagccactctgcagaagctgtttatcagctgtaga
gttctcaggtggattttttgaggtcacttatatatactatcatatcatct
gcaaatagtgatgttttgacccttcctttccagtttgtatccccttgacc
tccttttgctgtctaattgctcgaactagaacttcaaatactgtattgaa
tagatagggagagagttggcagctttgtctagtccctgattttagtggaa
ttgattcaagtttctctccattttgtttactgttggctaacggtttgatg
tatattgcttttactatgtataagtatgtgccttgaatttctgatctttc
caagtcttttaccatgaaggtgtagaattttgttaaatgctttgtcagta
tttaatgagaagtcatgtggtgtttttctttgagtttgtttatatagtag
atacattgatgggtttccatatattgaaccatccctgcctccctgggatg
atttctacttgatcatgatgaatgatcatttccatgagtcttggaatcag
ttgcaaggatttatgcgtacttgcattatattctatggaaatggtcgagt
ccttcttgttggtcttgggattaagggtctaccaatgtgtctcaaaacaa
atgatgggtctctc
gaattcttgtttactctttcactactgcctacatctttacactgctacat
tctgctggctctatttaccatttatgtcattcaatgaatatctaacagtt
cttccactggataaaatacattattaaagacagttaatgaataataaaga
aatatgaagaacataggagaatttaaagacaagtaccatttctttttgct
tggttttttttcagatattttctttattttatcacaattgctctgtagta
catattgagattggggattgtgattccaacagaggttcttttattgttgg
gaatagtttttgctatcctaagatttttgttattccagaggaatttacca
attgccctttctaactctgaagaattgagttggaattttgatggggatta
cattgaatatatagacagttttcagcaagatagccatttttcactatatt
aattctgccaatccatgagcatgggagatctttgcatcttttgaggtctt
cattaatttctttcttcagagattgaaatttcttgtcatacagatcattc
acttccttagttagagtcacgccaaggtatttcatattatttgtgttctt
tacctaatttctttctcagcatgtttatcctttatgtagagaaaggccac
tgattttttttagttaattttatatccggctactgcactgaagctgtata
tcaggtttaggaattctctggtggaattttggggtcacttctatatacca
tcatatcatctgcaaatagtgacattttgacttcttcctttccaatttgt
atccccttgatctccgtttgttgtctaattgctctggctaggatttcaag
tactatattgaataggtagggagatagtgggcagccttgtctcgtcctga
ttttagtgggattgcttacagtttctcactatttagtttgatgttgtcta
ctggtttgctgtagttgcttttatatgtttagtatgggccttgagtcctg
atctttctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7792215_7792936
seq2: B6Ng01-038G16.g_65_786

seq1  GAATTCTTGTTTACTCTTTCACTACTGCCTACATCTTTACACTGCTACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTACTCTTTCACTACTGCCTACATCTTTACACTGCTACAT  50

seq1  TCTGCTGGCTCTATTTACCATTTATGTCATTCAATGAATATCTAACAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGCTCTATTTACCATTTATGTCATTCAATGAATATCTAACAGTT  100

seq1  CTTCCACTGGATAAAATACATTATTAAAGACAGTTAATGAATAATAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACTGGATAAAATACATTATTAAAGACAGTTAATGAATAATAAAGA  150

seq1  AATATGAAGAACATAGGAGAATTTAAAGACAAGTACCATTTCTTTTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAAGAACATAGGAGAATTTAAAGACAAGTACCATTTCTTTTTGCT  200

seq1  TGGTTTTTTTTCAGATATTTTCTTTATTTTATCACAATTGCTCTGTAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTTTCAGATATTTTCTTTATTTTATCACAATTGCTCTGTAGTA  250

seq1  CATATTGAGATTGGGGATTGTGATTCCAACAGAGGTTCTTTTATTGTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGAGATTGGGGATTGTGATTCCAACAGAGGTTCTTTTATTGTTGG  300

seq1  GAATAGTTTTTGCTATCCTAAGATTTTTGTTATTCCAGAGGAATTTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTTTTTGCTATCCTAAGATTTTTGTTATTCCAGAGGAATTTACCA  350

seq1  ATTGCCCTTTCTAACTCTGAAGAATTGAGTTGGAATTTTGATGGGGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCCTTTCTAACTCTGAAGAATTGAGTTGGAATTTTGATGGGGATTA  400

seq1  CATTGAATATATAGACAGTTTTCAGCAAGATAGCCATTTTTCACTATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAATATATAGACAGTTTTCAGCAAGATAGCCATTTTTCACTATATT  450

seq1  AATTCTGCCAATCCATGAGCATGGGAGATCTTTGCATCTTTTGAGGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGCCAATCCATGAGCATGGGAGATCTTTGCATCTTTTGAGGTCTT  500

seq1  CATTAATTTCTTTCTTCAGAGATTGAAATTTCTTGTCATACAGATCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTTCTTTCTTCAGAGATTGAAATTTCTTGTCATACAGATCATTC  550

seq1  ACTTCCTTAGTTAGAGTCACGCCAAGGTATTTCATATTATTTGTGTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTTAGTTAGAGTCACGCCAAGGTATTTCATATTATTTGTGTTCTT  600

seq1  TACCTAATTTCTTTCTCAGCATGTTTATCCTTTATGTAGAGAAAGGCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAATTTCTTTCTCAGCATGTTTATCCTTTATGTAGAGAAAGGCCAC  650

seq1  TGATTTTTTTTAGTTAATTTTATATCCGGCTACTGCACTGAAGCTGTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTTAGTTAATTTTATATCCGGCTACTGCACTGAAGCTGTATA  700

seq1  TCAGGTTTAGGAATTCTCTGGT  722
      ||||||||||||||||||||||
seq2  TCAGGTTTAGGAATTCTCTGGT  722