BAC Information

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BAC

Clone NameB6Ng01-038J15
Chromosome5 (Build37)
Map Location 128,241,651 - 128,345,322
singlet/doubletdoublet
Overlap geneTmem132d
Upstream geneLOC100040327, Tmem132c, Slc15a4, Glt1d1
Downstream geneFzd10, LOC100040398, Piwil1, Rimbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038J15.bB6Ng01-038J15.g
ACCDH866118DH866119
length5511,110
definitionDH866118|Mus musculus domesticus DNA, BAC clone: B6Ng01-038J15, 5' end.DH866119|Mus musculus domesticus DNA, BAC clone: B6Ng01-038J15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,241,651 - 128,242,201)(128,344,187 - 128,345,322)
sequence
gaattctgcaagcagctatcctgcatcctgttacaacaacagttcattgt
cctgttacaacagctcctctgtgacagcagaccagactgtcacccagtgg
cctggcttgaggatgctcccgttgttcattcaatcccaggaaacaaacaa
catgcggctcccgtggctgttcagtttcagtaattcatcaagtctggaag
atgggaaggagtgggcaaagggagaaggaggaagagcctgcaccctttag
gctgtcaaggtttgcttaaaattctaggacagcgaaagacaaggtctagg
atttcaactcttccagaaaaggctggatggctctcctgaaagacaaatgt
cactcccttcctctcctttgtggatgttagctttgactcttcagatgtga
gtgtttcctttggaatggccacatagatcagaaaattagtaaggagcctt
gaaggatgagtctcaagggaagacagacagaacacagagctataacgggt
taaagtgggacaggaagggttaaatgggggcaggggtggggacagggggt
g
gaattcactccatcactgcccccattacatcctccctacaaaatccaggt
gttgacagaaatggcctcttggcagctggctgttatcaacatttggcttc
ctgtgaccaggtgaaagaccaggccttttgcgagggaggcaggaagagac
atcctcacgttcaggtgacaggtgacttggggattagctaatggacatat
gtttgttcttccaggaggcagagatcctgaacacagccatcctcactgga
aagacggtggctgtccctgtgaaggtgatctctgtggaggaagatggcac
agtacaaggtcttttggactcagtggagtgcaggtcatctgacgaagacg
tggttaaggcaagtggatggttcctcgcccattaggaagcccatagttac
acgggcatgggtgtttatccccagctgagatctgtggggtctgcagggtt
cctcccattctggttttcttgcaatttaaatcaggagtgtctcccacccc
aacgccaaataggatatacactgctataacccatgcctgggctgtgagac
atttcttctgtgcctaagtcaccaacatggtccccccccctagaccctgg
gagttggcagagggatatggggaccatatacaccctcccaagcctagact
gaaaaacagaggtttctttccacccacttgggctgtgaaggtatagaaag
gagagtcaggacctggactggtacacaggcagccatgcttcgtgatgtat
tcacagccaaatagcttgtgtgaaatcgataaaggcataaagtttatgat
tacaaccaactttgatttacaaaaccagccagcggagagaggagttgact
cccaacccctggccctcccacacgattgcacaagagcgagggacatcaca
cactatgccccatccctttgttccgttccctgcctccatttttcctccca
acctctctttctctttttaaatgaaagcaaaatgatccaaggcaaaaaaa
aaaaagcatgctgggagaagcctgagggcaagatctcagtctggctgtcc
aggaattcctcagcagttcgacgcaggatggatgatttttatagctggcc
atgaccactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_128241651_128242201
seq2: B6Ng01-038J15.b_47_597

seq1  GAATTCTGCAAGCAGCTATCCTGCATCCTGTTACAACAACAGTTCATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAAGCAGCTATCCTGCATCCTGTTACAACAACAGTTCATTGT  50

seq1  CCTGTTACAACAGCTCCTCTGTGACAGCAGACCAGACTGTCACCCAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTACAACAGCTCCTCTGTGACAGCAGACCAGACTGTCACCCAGTGG  100

seq1  CCTGGCTTGAGGATGCTCCCGTTGTTCATTCAATCCCAGGAAACAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTGAGGATGCTCCCGTTGTTCATTCAATCCCAGGAAACAAACAA  150

seq1  CATGCGGCTCCCGTGGCTGTTCAGTTTCAGTAATTCATCAAGTCTGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGGCTCCCGTGGCTGTTCAGTTTCAGTAATTCATCAAGTCTGGAAG  200

seq1  ATGGGAAGGAGTGGGCAAAGGGAGAAGGAGGAAGAGCCTGCACCCTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAGGAGTGGGCAAAGGGAGAAGGAGGAAGAGCCTGCACCCTTTAG  250

seq1  GCTGTCAAGGTTTGCTTAAAATTCTAGGACAGCGAAAGACAAGGTCTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAAGGTTTGCTTAAAATTCTAGGACAGCGAAAGACAAGGTCTAGG  300

seq1  ATTTCAACTCTTCCAGAAAAGGCTGGATGGCTCTCCTGAAAGACAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAACTCTTCCAGAAAAGGCTGGATGGCTCTCCTGAAAGACAAATGT  350

seq1  CACTCCCTTCCTCTCCTTTGTGGATGTTAGCTTTGACTCTTCAGATGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTTCCTCTCCTTTGTGGATGTTAGCTTTGACTCTTCAGATGTGA  400

seq1  GTGTTTCCTTTGGAATGGCCACATAGATCAGAAAATTAGTAAGGAGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCCTTTGGAATGGCCACATAGATCAGAAAATTAGTAAGGAGCCTT  450

seq1  GAAGGATGAGTCTCAAGGGAAGACAGACAGAACACAGAGCTATAACGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATGAGTCTCAAGGGAAGACAGACAGAACACAGAGCTATAACGGGT  500

seq1  TAAAGTGGGACAGGAAGGGTTAAATGGGGGCAGGGGTGGGGACAGGGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGGGACAGGAAGGGTTAAATGGGGGCAGGGGTGGGGACAGGGGGT  550

seq1  G  551
      |
seq2  G  551

seq1: chr5_128344187_128345322
seq2: B6Ng01-038J15.g_69_1178 (reverse)

seq1  GAGTGGGTCATGG-CAGCTATAAAAATCCACTCCATCCTGCTGTCTGGAA  49
      |||| |||||||| ||||||||||||||   |||||||||| |||  |||
seq2  GAGT-GGTCATGGCCAGCTATAAAAATC--ATCCATCCTGC-GTC--GAA  44

seq1  CCTTGCTGAGAGATTCCTGGCACAGCCAGACTGGAGTCCTTGCCCTCAGG  99
      |  |||||||  |||||||| ||||||||||| |||  ||||||||||||
seq2  C--TGCTGAGGAATTCCTGG-ACAGCCAGACT-GAGATCTTGCCCTCAGG  90

seq1  CTTCTCCCAGCATGCTTTTTTTTTTTTTTTTTTTTTTTTGCCTTGGATCA  149
      |||||||||||||||            |||||||||||||||||||||||
seq2  CTTCTCCCAGCATGC------------TTTTTTTTTTTTGCCTTGGATCA  128

seq1  TTTTTGCTTTCAATTTTAAAAAAGAGAAAGAAGAGGTTGGGAGGAAAAAT  199
       |||||||||||   || |||||||||||| |||||||||||||||||||
seq2  -TTTTGCTTTCA---TTTAAAAAGAGAAAG-AGAGGTTGGGAGGAAAAAT  173

seq1  GGAGGCAGGGAACGGAACAAAGGGATGGGGCATAGTGTGTGATGTCCCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGGGAACGGAACAAAGGGATGGGGCATAGTGTGTGATGTCCCTC  223

seq1  GCTCTTGTGCAATCGTGTGGGAGGGCCAGGGGTTGGGAGTCAACTCCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGTGCAATCGTGTGGGAGGGCCAGGGGTTGGGAGTCAACTCCTCT  273

seq1  CTCCGCTGGCTGGTTTTGTAAATCAAAGTTGGTTGTAATCATAAACTTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGCTGGCTGGTTTTGTAAATCAAAGTTGGTTGTAATCATAAACTTTA  323

seq1  TGCCTTTATCGATTTCACACAAGCTATTTGGCTGTGAATACATCACGAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTATCGATTTCACACAAGCTATTTGGCTGTGAATACATCACGAAG  373

seq1  CATGGCTGCCTGTGTACCAGTCCAGGTCCTGACTCTCCTTTCTATACCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTGCCTGTGTACCAGTCCAGGTCCTGACTCTCCTTTCTATACCTT  423

seq1  CACAGCCCAAGTGGGTGGAAAGAAACCTCTGTTTTTCAGTCTAGGCTTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCCAAGTGGGTGGAAAGAAACCTCTGTTTTTCAGTCTAGGCTTGG  473

seq1  GAGGGTGTATATGGTCCCCATATCCCTCTGCCAACTCCCAGGGTCTAGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGTATATGGTCCCCATATCCCTCTGCCAACTCCCAGGGTCTAGGG  523

seq1  GGGGGGACCATGTTGGTGACTTAGGCACAGAAGAAATGTCTCACAGCCCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGACCATGTTGGTGACTTAGGCACAGAAGAAATGTCTCACAGCCCA  573

seq1  GGCATGGGTTATAGCAGTGTATATCCTATTTGGCGTTGGGGTGGGAGACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGTTATAGCAGTGTATATCCTATTTGGCGTTGGGGTGGGAGACA  623

seq1  CTCCTGATTTAAATTGCAAGAAAACCAGAATGGGAGGAACCCTGCAGACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGATTTAAATTGCAAGAAAACCAGAATGGGAGGAACCCTGCAGACC  673

seq1  CCACAGATCTCAGCTGGGGATAAACACCCATGCCCGTGTAACTATGGGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGATCTCAGCTGGGGATAAACACCCATGCCCGTGTAACTATGGGCT  723

seq1  TCCTAATGGGCGAGGAACCATCCACTTGCCTTAACCACGTCTTCGTCAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATGGGCGAGGAACCATCCACTTGCCTTAACCACGTCTTCGTCAGA  773

seq1  TGACCTGCACTCCACTGAGTCCAAAAGACCTTGTACTGTGCCATCTTCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGCACTCCACTGAGTCCAAAAGACCTTGTACTGTGCCATCTTCCT  823

seq1  CCACAGAGATCACCTTCACAGGGACAGCCACCGTCTTTCCAGTGAGGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAGATCACCTTCACAGGGACAGCCACCGTCTTTCCAGTGAGGATG  873

seq1  GCTGTGTTCAGGATCTCTGCCTCCTGGAAGAACAAACATATGTCCATTAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTTCAGGATCTCTGCCTCCTGGAAGAACAAACATATGTCCATTAG  923

seq1  CTAATCCCCAAGTCACCTGTCACCTGAACGTGAGGATGTCTCTTCCTGCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCCCCAAGTCACCTGTCACCTGAACGTGAGGATGTCTCTTCCTGCC  973

seq1  TCCCTCGCAAAAGGCCTGGTCTTTCACCTGGTCACAGGAAGCCAAATGTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCGCAAAAGGCCTGGTCTTTCACCTGGTCACAGGAAGCCAAATGTT  1023

seq1  GATAACAGCCAGCTGCCAAGAGGCCATTTCTGTCAACACCTGGATTTTGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAGCCAGCTGCCAAGAGGCCATTTCTGTCAACACCTGGATTTTGT  1073

seq1  AGGGAGGATGTAATGGGGGCAGTGATGGAGTGAATTC  1136
      |||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGATGTAATGGGGGCAGTGATGGAGTGAATTC  1110