BAC Information

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BAC

Clone NameB6Ng01-038O02
Chromosome5 (Build37)
Map Location 10,005,740 - 10,006,515
singlet/doubletsinglet
Overlap genenone
Upstream gene4930420K17Rik, Dmtf1, LOC654361, 9330182L06Rik, Grm3, LOC100042768
Downstream geneLOC625446, LOC435832, LOC100041395, LOC381612, EG625586, LOC242809, LOC623849, LOC100041408, LOC667880, EG667888
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038O02.g
ACCDH866309
length776
definitionDH866309|Mus musculus domesticus DNA, BAC clone: B6Ng01-038O02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggcaggtcaggaagaaggagctgatacagaagccatggaggga
tgttccttactggcttgctcagcctgctctcttatagaaccaagactacc
agcccagagatggccccacccacaaggagcctgaaacccttgatcactaa
ttgagaaaatgccttacagttggatctcagggaggcatttcctcaactga
agctcctgtctctgtgataactccagctgtgtcaagttgacacaaaatta
gccagtacagtttctcaagtactatttagtgtgctcctgttcttatgtga
aactgatcaaattagacacttaggcagataagacactgcctgggaaaatg
agatgggcagcatggaagataaagaactttctcagcagaaggaataccag
ttgcactgtgaagacagcacaatggtctagactgacctacttgaaggaca
ggccagcttataagaacatgttggaaagatgtacagtgtctggagctgag
ctcagcctggtagcactactgcacagacctacttgtaatccaccttaatt
atcctacaaatcctgaattttatttcaaaatccgaggaaatctttttcta
tcatacaaatgaaattatttgtccttgtgtttctagtttatcttttaatt
gcttatgaagcatatgtatcaaaggaaagagaagtagtcatgactaaatg
aatttgtaaagtctttaaacgggacatggatattgaaaatgaatctctta
aggtatggaccaagatttttctctaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_10005740_10006515
seq2: B6Ng01-038O02.g_71_846

seq1  GAATTCAGGCAGGTCAGGAAGAAGGAGCTGATACAGAAGCCATGGAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCAGGTCAGGAAGAAGGAGCTGATACAGAAGCCATGGAGGGA  50

seq1  TGTTCCTTACTGGCTTGCTCAGCCTGCTCTCTTATAGAACCAAGACTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTACTGGCTTGCTCAGCCTGCTCTCTTATAGAACCAAGACTACC  100

seq1  AGCCCAGAGATGGCCCCACCCACAAGGAGCCTGAAACCCTTGATCACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGAGATGGCCCCACCCACAAGGAGCCTGAAACCCTTGATCACTAA  150

seq1  TTGAGAAAATGCCTTACAGTTGGATCTCAGGGAGGCATTTCCTCAACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAAATGCCTTACAGTTGGATCTCAGGGAGGCATTTCCTCAACTGA  200

seq1  AGCTCCTGTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTGTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAATTA  250

seq1  GCCAGTACAGTTTCTCAAGTACTATTTAGTGTGCTCCTGTTCTTATGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTACAGTTTCTCAAGTACTATTTAGTGTGCTCCTGTTCTTATGTGA  300

seq1  AACTGATCAAATTAGACACTTAGGCAGATAAGACACTGCCTGGGAAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATCAAATTAGACACTTAGGCAGATAAGACACTGCCTGGGAAAATG  350

seq1  AGATGGGCAGCATGGAAGATAAAGAACTTTCTCAGCAGAAGGAATACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGCAGCATGGAAGATAAAGAACTTTCTCAGCAGAAGGAATACCAG  400

seq1  TTGCACTGTGAAGACAGCACAATGGTCTAGACTGACCTACTTGAAGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTGTGAAGACAGCACAATGGTCTAGACTGACCTACTTGAAGGACA  450

seq1  GGCCAGCTTATAAGAACATGTTGGAAAGATGTACAGTGTCTGGAGCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCTTATAAGAACATGTTGGAAAGATGTACAGTGTCTGGAGCTGAG  500

seq1  CTCAGCCTGGTAGCACTACTGCACAGACCTACTTGTAATCCACCTTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTGGTAGCACTACTGCACAGACCTACTTGTAATCCACCTTAATT  550

seq1  ATCCTACAAATCCTGAATTTTATTTCAAAATCCGAGGAAATCTCTTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATCCTACAAATCCTGAATTTTATTTCAAAATCCGAGGAAATCTTTTTCTA  600

seq1  TCATACAAATGAAAATATTTGTCCTTGTGTTTCTAGTTGATCATTTAATT  650
      |||||||||||||| ||||||||||||||||||||||| ||| |||||||
seq2  TCATACAAATGAAATTATTTGTCCTTGTGTTTCTAGTTTATCTTTTAATT  650

seq1  GCTTATGAAGCATATGTATCAAAGGAAAGAGAAGTAGCCATGAC-AAATG  699
      ||||||||||||||||||||||||||||||||||||| |||||| |||||
seq2  GCTTATGAAGCATATGTATCAAAGGAAAGAGAAGTAGTCATGACTAAATG  700

seq1  AATTTGTAAAGTCTTGTAAACGGGACATGGATATTGAAAATGAAACTCTT  749
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  AATTTGTAAAGTCTT-TAAACGGGACATGGATATTGAAAATGAATCTCTT  749

seq1  AAGGTAAGGACCAAGAGTTATCTCTAA  776
      |||||| ||||||||| || |||||||
seq2  AAGGTATGGACCAAGATTTTTCTCTAA  776


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