BAC Information

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BAC

Clone NameB6Ng01-039L17
Chromosome5 (Build37)
Map Location 128,176,653 - 128,177,757
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040327, Tmem132c, Slc15a4, Glt1d1
Downstream geneTmem132d, Fzd10
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039L17.bB6Ng01-039L17.g
ACCDH866915DH866916
length1,100341
definitionDH866915|Mus musculus domesticus DNA, BAC clone: B6Ng01-039L17, 5' end.DH866916|Mus musculus domesticus DNA, BAC clone: B6Ng01-039L17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagggcagttactggagtaggagcaggagcaggagctctgcttgc
tggcttgctcagcctgctttcttatacaacccatgacagccttgcccagg
agtggcaccgctcatagtgggccccgctcccccacatcgaacaaaaacta
agaaaattcttcccagggatgcccacaagacaatcggatggaaacagttc
ctttattgaggttccctcttcccaggtgacaaaaactaagcagtatggag
catttgtttggggatcttacaaggagatccaactgaagcatctaccttta
catatctctccatgtctatatctatgtctgtatctatatgcatatctcca
tctttctatctctatgtctatatgcaatctcaccatatagctaatgtaga
ggtatatctatctctctatatatatctagataatatatctctatatttat
attccatacttatgcctatatctattattttttttatctaaaaagttgat
gactaagcacatttcactgtcgggacagaataatctctggttttgtacac
ttcacctctggaaaatttcaatttgaaggaagcttcccgaaccggctcag
cattgatttctcattacctcaacaatctggttatttctccatttaagaag
gaaggagtccagcggctttcctaggtgtttttatagctcagttttatagc
ttcaaaattaagatctatatgacatttaatagaaatcgtgaattcatatt
ctgccagggttgggctcttcaagggcgactcaagctgatctgctaggttt
tctttttgttctttagacaactatcaagaaataaatttggggatacaaat
ggcggtggtggctaatgtttataaaggacatgctgtatttgagctcctat
tcttagtggccaacatgacatggcttatgtgtctctgtctctgttctctc
tgtctctctgtctctgtgtctctgtgtctctgtctctctgctgtctctct
ctctctctctctctctctcactcactcatatgagacagggtttccctggg
tagccttggctgtctagaacttactttgagaccaggctggcttaaactca


tatatctccttctgtagccatttggtccttagtgttaccatattcagatc
accttccactcagcaacctttctccaaaataatatgctttccctcctcat
ctctgagtctcagagagttttgtgatcatgagctagagaagttgctcggt
agttaagagcaccggttactcttcccaaggatccaaggttagttccaagc
atccacatggtaactccaggggacctgacaccctttctctccttctgtag
gtactctacattatagatagatagatagatagatagatagatagatagat
agatagatagatagatagatgatagatagatgatagataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_128176653_128177757
seq2: B6Ng01-039L17.b_43_1142

seq1  GAATTCAGGGCAGTTACTGGAGTAGGAGCAGGAGCAGGAGCTCTGCTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGCAGTTACTGGAGTAGGAGCAGGAGCAGGAGCTCTGCTTGC  50

seq1  TGGCTTGCTCAGCCTGCTTTCTTATACAACCCATGACAGCCTTGCCCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGCTCAGCCTGCTTTCTTATACAACCCATGACAGCCTTGCCCAGG  100

seq1  AGTGGCACCGCTCATAGTGGGCCCCGCTCCCCCACATCGAACAAAAACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCACCGCTCATAGTGGGCCCCGCTCCCCCACATCGAACAAAAACTA  150

seq1  AGAAAATTCTTCCCAGGGATGCCCACAAGACAATCGGATGGAAACAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTCTTCCCAGGGATGCCCACAAGACAATCGGATGGAAACAGTTC  200

seq1  CTTTATTGAGGTTCCCTCTTCCCAGGTGACAAAAACTAAGCAGTATGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTGAGGTTCCCTCTTCCCAGGTGACAAAAACTAAGCAGTATGGAG  250

seq1  CATTTGTTTGGGGATCTTACAAGGAGATCCAACTGAAGCATCTACCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTTGGGGATCTTACAAGGAGATCCAACTGAAGCATCTACCTTTA  300

seq1  CATATCTCTCCATGTCTATATCTATGTCTGTATCTATATGCATATCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTCTCCATGTCTATATCTATGTCTGTATCTATATGCATATCTCCA  350

seq1  TCTTTCTATCTCTATGTCTATATGCAATCTCACCATATAGCTAATGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTATCTCTATGTCTATATGCAATCTCACCATATAGCTAATGTAGA  400

seq1  GGTATATCTATCTCTCTATATATATCTAGATAATATATCTCTATATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATCTATCTCTCTATATATATCTAGATAATATATCTCTATATTTAT  450

seq1  ATTCCATACTTATGCCTATATCTATTATTTTTTTTATCTAAAAAGTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATACTTATGCCTATATCTATTATTTTTTTTATCTAAAAAGTTGAT  500

seq1  GACTAAGCACATTTCACTGTCGGGACAGAATAATCTCTGGTTTTGTACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGCACATTTCACTGTCGGGACAGAATAATCTCTGGTTTTGTACAC  550

seq1  TTCACCTCTGGAAAATTTCAATTTGAAGGAAGCTTCCCGAACCGGCTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTCTGGAAAATTTCAATTTGAAGGAAGCTTCCCGAACCGGCTCAG  600

seq1  CATTGATTTCTCATTACCTCAACAATCTGGTTATTTCTCCATTTAAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTTCTCATTACCTCAACAATCTGGTTATTTCTCCATTTAAGAAG  650

seq1  GAAGGAGTCCAGCGGCTTTCCTAGGTGTTTTTATAGCTCAGTTTTATAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGTCCAGCGGCTTTCCTAGGTGTTTTTATAGCTCAGTTTTATAGC  700

seq1  TTCAAAATTAAGATCTATATGACATTTAATAGAAATCGTGAATTCATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATTAAGATCTATATGACATTTAATAGAAATCGTGAATTCATATT  750

seq1  CTGCCAGGGTTGGGCTCTTCAAGGGCGACTCAAGCTGATCTGCTAGGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGGGTTGGGCTCTTCAAGGGCGACTCAAGCTGATCTGCTAGGTTT  800

seq1  TCTTTTTGTTCTTTAGACAACTATCAAGAAATAAATTTGGGGATACAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGTTCTTTAGACAACTATCAAGAAATAAATTTGGGGATACAAAT  850

seq1  GGCGGTGGTGGCTAATGTTTATAAAGGACATGCTGTATTTGAGCTCCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGTGGTGGCTAATGTTTATAAAGGACATGCTGTATTTGAGCTCCTAT  900

seq1  TCTTAGTGGCCAACATGACATGGCTTATGTGTCTCTGTCTCTGTTTCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTTAGTGGCCAACATGACATGGCTTATGTGTCTCTGTCTCTG-TTCTCT  949

seq1  CTGTCTCTCTGTCTCTGTGTCTCTGTGTCTCTGTCTCTCTGTCTGTCTCT  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGTCTCTCTGTCTCTGTGTCTCTGTGTCTCTGTCTCTCTG-CTGTCTCT  998

seq1  CTCTCTCTCTCTCTCTCTCTCACTCACTCATATGAGACAGGGTTTCCCTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCACTCACTCATATGAGACAGGGTTTCCCTG  1048

seq1  TGTAGCCCTGGCTGTCCTAGAACTTACTTTGTAGACCAGGCTGGCCTCAA  1100
       |||||| ||||||| ||||||||||||||| |||||||||||| || ||
seq2  GGTAGCCTTGGCTGT-CTAGAACTTACTTTG-AGACCAGGCTGG-CTTAA  1095

seq1  ACTCA  1105
      |||||
seq2  ACTCA  1100


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