BAC Information

Click to search

BAC

Clone NameB6Ng01-041L02
Chromosome5 (Build37)
Map Location 51,610,091 - 51,610,626
singlet/doubletsinglet
Overlap genenone
Upstream geneEG637307, LOC100041015, LOC242987, EG624734, LOC666265, LOC100041059
Downstream genePpargc1a, Dhx15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041L02.bB6Ng01-041L02.g
ACCDH868282DH868283
length8021,019
definitionDH868282|Mus musculus domesticus DNA, BAC clone: B6Ng01-041L02, 5' end.DH868283|Mus musculus domesticus DNA, BAC clone: B6Ng01-041L02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaaacttttatcatgaatgggtgttggatcttgt
caaatgctttttctgcatctaacaagatgatcatgtggtttttgtctttg
agtttgtttatataatggattacattgatggattttcgtatattaaacca
tccctgcatccctggaataaaacctacttggtcaggatggatgattgctt
taatgtgttcttggattcggttagggagaactttattgaggatttttgca
tcgatattcataagagaaattggtctgaagttctctatctttgttgggtc
tttctgtggtttaggtatcagagtaatagtggcttcatatgatgagttgg
ctagagtaccttctacttctattttgtgaaatagtttgtgcagaaatgga
attagatcttctttgaaggtctgatagaactctgcactaaacctgtctgg
tcctgggctttttttggctgggagactgttaataactgcttctatttctt
taggtgatatgggactgtttagatggtcaacttgatcctgattcaacttt
ggtacctggtatctgtccggaaatttgtccatttcgtccaggtttttcag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcagaatcttttgttatgtctcccttttcatttctgactttgttaatt
aggattttgtccctgtgccctttaatgagtctagctaagggtttatctat
cttgttgattttctcaaagaaccaactcctcgtttgggttattcttttga
at
gaattctcacctgaggaataccgaatggcagaggagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgctaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggaatgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaaagcatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaacctcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgcccttatccagggatccccccataatc
agcattcaacgctgacctcattgcatacactagcaagtttttattgaaag
gacccagatgtagctttctcttgtgagactttgctggggcctagcaactc
ataagtgggaagcttcacagtcacttaagggatggatcttgggctcccat
ggaggagctaaaaaagatcccatggagctaaaggaatctgcaaccttaag
ggggacaacttttgaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_51610091_51610626
seq2: B6Ng01-041L02.b_303_839 (reverse)

seq1  ATTC-AAAGAATTAACCAAATGAGGAGTTGGTTCTTTGAGAAAATCAACA  49
      |||| ||||||| | ||||| |||||||||||||||||||||||||||||
seq2  ATTCAAAAGAATAACCCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACA  50

seq1  AGATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATC  99
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGATAGATAAACCCTTAGCTAGACTCATTAAAGGGCACAGGGACAAAATC  100

seq1  CTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGA  149
      |||||||||||| ||||||||||||||||||||||||||| |||| ||||
seq2  CTAATTAACAAAGTCAGAAATGAAAAGGGAGACATAACAAAAGATTCTGA  150

seq1  AGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAA  200

seq1  AACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTA  249
      ||||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  AACTGAAAAACCTGGACGAAATGGACAAATTTCCGGACAGATACCAGGTA  250

seq1  CCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACC  300

seq1  TAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAG  349
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAAAGAAATAGAAGCAGTTATTAACAGTCTCCCAGCCAAAAAAAGCCCAG  350

seq1  GACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAAATCTA  399
      |||||||| ||||||||||||||||||||||||||||||||||| |||||
seq2  GACCAGACAGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTA  400

seq1  ATTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCT  449
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCT  450

seq1  ACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGA  499
      | |||||||||  |||||||||||||||||||||||||||||||||||||
seq2  AGCCAACTCATCATATGAAGCCACTATTACTCTGATACCTAAACCACAGA  500

seq1  AAGACCCAACAAAGATAGAGAACTTCAGACCAATTTC  536
      |||||||||||||||||||||||||||||||||||||
seq2  AAGACCCAACAAAGATAGAGAACTTCAGACCAATTTC  537