BAC Information

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BAC

Clone NameB6Ng01-041N24
Chromosome5 (Build37)
Map Location 84,258,450 - 84,259,018
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039434, Srd5a2l2, LOC100039608
Downstream geneLOC231368, Epha5, LOC100039489
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041N24.bB6Ng01-041N24.g
ACCDH868407DH868408
length5631,155
definitionDH868407|Mus musculus domesticus DNA, BAC clone: B6Ng01-041N24, 5' end.DH868408|Mus musculus domesticus DNA, BAC clone: B6Ng01-041N24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcacctgaggaatactgaatggcagagaatcacctgaaaaaatgttcaac
atccttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacc
tattatcattttttattttaatattgctgttcaatatggcaaacaacagg
attgattgcctttgggtttccccacattcctcatctctgtctcacattat
actttagaaacattggaattacagatgtttcttcttgtgtgaggctttac
atggatactggggatccaaatgcacgtcctcaagctgtccaggcaagccc
tttccagcttatccaggttactagcactctctagtacttcttaacccctt
tgtcataaatattacttcttctaacattttctcattctaattctcgaaaa
tcttgtataaccaaatagaataatgcataaaaaaggctctactataatat
gtgatatttacaaccctataaaaaattgaattaggatagataatgatcca
tacatgacatgaaagaattcgttatatgtgtagtttaaaggggatagaag
gatggggaagagg
gaattctcacctgaggaataccgaatgggtgagaagcacctgaaaaaatg
ttcaacatcattaatcatcagggagatacaaatcaaaacaaccctgagtt
tctacctcacatcagttagaatgggtaagatcaacaattcaggtgacagc
agattctggctaggatgtggaggaagaggaacagtcctccattgagagtg
ggattgcaagctggtacaaccactctggaattcactttggtggttccttg
gaaaattggacatagttctactggaagatccagcaataccactcctgggc
atatacccagaaggtgctccaacttgtaataaggacacatgctccacaat
tttcacagcagccttatttataataacctgaagctcaaaagaacccagat
gaccctcaacataagaataaaatgtggtacatttacacaatggagtacta
ctcagctattaaaatcaatgaatttatgaaattctcaggcaaatggatgg
atctagaggttatcatcccgaatgaggttatccaatcacaaaagaataca
cagaatacaaactcactgataagtggttattagcacagaaattagaatgc
ccaagatacaatttgcaaaactcataacactcaagaaaaaggaagaccaa
agtgtgaatacttcgttccttcttagaattgagaacaatataccaatgga
aggagttcagagaaaatgttctgaactgagactgaaggaaagaccatcca
gaggctgccccacccgaggatccatcccataaacaaccaccaaatccaga
cactattgcatatatcaacaatatttttgctgacaggaccctgctatagc
tgtctcctgtgagctatgccagtgcctggcaaatacagaagtgaatgctc
acagtcatctatcggatggaacacaggtccccaatggtagagaaagtacc
caagagctgaggggtctgcagtcctataggaggaacacaaaatgactaac
agtatcccagagcttggtggtgtctctagctccatatgtagccgaaggtg
gcctagttggccatcaataaaggaagccttgtcttgtgaagattctatgg
cccctctaatagggaatgccaggccaggagatggggagatgggttagttt
gagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_84258450_84259018
seq2: B6Ng01-041N24.b_46_614

seq1  GAATTCTCACCTGAGGAATACTGAATGGCAGAGAATCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACTGAATGGCAGAGAATCACCTGAAAAAATG  50

seq1  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTATTATCATTTTTTATTTTAATATTGCTGTTCAATATGGCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTATTATCATTTTTTATTTTAATATTGCTGTTCAATATGGCAAAC  150

seq1  AACAGGATTGATTGCCTTTGGGTTTCCCCACATTCCTCATCTCTGTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGATTGATTGCCTTTGGGTTTCCCCACATTCCTCATCTCTGTCTCA  200

seq1  CATTATACTTTAGAAACATTGGAATTACAGATGTTTCTTCTTGTGTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATACTTTAGAAACATTGGAATTACAGATGTTTCTTCTTGTGTGAGG  250

seq1  CTTTACATGGATACTGGGGATCCAAATGCACGTCCTCAAGCTGTCCAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACATGGATACTGGGGATCCAAATGCACGTCCTCAAGCTGTCCAGGC  300

seq1  AAGCCCTTTCCAGCTTATCCAGGTTACTAGCACTCTCTAGTACTTCTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTTTCCAGCTTATCCAGGTTACTAGCACTCTCTAGTACTTCTTAA  350

seq1  CCCCTTTGTCATAAATATTACTTCTTCTAACATTTTCTCATTCTAATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTGTCATAAATATTACTTCTTCTAACATTTTCTCATTCTAATTCT  400

seq1  CGAAAATCTTGTATAACCAAATAGAATAATGCATAAAAAAGGCTCTACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAATCTTGTATAACCAAATAGAATAATGCATAAAAAAGGCTCTACTA  450

seq1  TAATATGTGATATTTACAACCCTATAAAAAATTGAATTAGGATAGATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGTGATATTTACAACCCTATAAAAAATTGAATTAGGATAGATAAT  500

seq1  GATCCATACATGACATGAAAGAATTCGTTATATGTGTAGTTTAAAGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATACATGACATGAAAGAATTCGTTATATGTGTAGTTTAAAGGGGA  550

seq1  TAGAAGGATGGGGAAGAGG  569
      |||||||||||||||||||
seq2  TAGAAGGATGGGGAAGAGG  569