BAC Information

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BAC

Clone NameB6Ng01-043L16
Chromosome5 (Build37)
Map Location 7,653,917 - 7,693,106
singlet/doubletdoublet
Overlap genenone
Upstream geneEG435830, LOC100042651, 4921511H03Rik, LOC242823
Downstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440, Abcb1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043L16.bB6Ng01-043L16.g
ACCDH869704DH869705
length7851,135
definitionDH869704|Mus musculus domesticus DNA, BAC clone: B6Ng01-043L16, 5' end.DH869705|Mus musculus domesticus DNA, BAC clone: B6Ng01-043L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,653,917 - 7,654,700)(7,691,986 - 7,693,106)
sequence
gaattcctctcattactgccacagtttaattttaatcctttttaattttt
gatatcagaggctctcaaacatctttcggctttcccatctgaattacatg
aatgaggctacagttgacctattttgcagctaagcatagcctagctttga
aaatttcccttgattctcttcaattattatcttcactttatttgtatctt
aagtaaaacactggtaccatttttctggtcaggctctgttcttaataaat
atacaattttgtcttcaaaaacactcattttatgaagtctaagatacagc
tatgaattgatttctcaggtttaaatagatgtcgatggggaggagcatag
aggaccagggaaacttagaggaatgcctgagtgagacgtgcactttgtct
taaacgcctggacaaatccctaacttttgcctgtgtgaataaaccaatat
ctctacaagcatttaacatgattttctattaaattccatataccattcac
agtatcattaatagtgtcagaggctggctctctcccatgagatggtttca
atttgggccagtcattggttaactgttccctcagtctcagctccatcttt
attcctgaacagcttgtaggcaggacagattttgggttgaaggttttgtg
ggtaggttaatatccctctccctcccctggaagccctcctagctacagga
ggtggccatttcagtctcatacaccactgctaggagtcttagctaaggtc
cctccacagactcctaggagtcttcccctgccccc

gaattctcattttctggagaagaggggatatttgttatcctgttaaagag
aaaaattgtctttatctcactaattgttatctcagtatctccatgcacta
atgtatggttaccagaacaactatgtaagatttcagtatcttcatgctct
aatgtatggttatcagaacaaatatgtaagatcatgtaaaagccgagctg
tgatgataaaaatgttaaccatgaaaatggtcacattcttaactaaattg
ttagctgcatttttcttatgtttaaggtcacaataatctttaatatcacc
agagcatttttcttaggatgaagtcatatttcagccaggtcttactgaga
attataaattattgatcactcagaaaattttgagaaataatttttaatcc
cttaattaaaatacatttaaaaattaaatctgtgtgtgacatttcaagag
aattttaaaggcaaattataaaatctttcatatattatcagaaatattat
gtttattctgaatgtgcacaggaaatttttagtgtacaagaattcagaaa
tgactcttttcctttctagtataaattaattaaaacttgggtggaattag
atatttacccttgagacatatctttagtatattgtaaaaacataagtagc
aggcacaggttcattctagtctgggctattgccctgagtagatcttgggt
gcaaactcctatgccagtcccacaacatccagaggaagctccactcccaa
atgctctaacatgcccagcccaggatcataggatcagcggtgaggaggat
acaacatctactctaacaccggaagtaattgggaccagtgggacccagac
acccagcaactccacccaaccagtggcatgggttcctttcgttctgagcc
agtgctctgagctgaccttgggcaggaactccacagccagtcccacacat
ccagaagaagctccactcccaggcactctaacataaccaggaccacagca
tcccaggacctaggatcccaggatctggtcacacaggatctcagcttcca
gagaaaacttgactccaggagctctgaccacccatgatctcagatcccag
atgccgaatccagatcccgagaacgctgacctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7653917_7654700
seq2: B6Ng01-043L16.b_43_827

seq1  GAATTCCTCTCATTACTGCCACAGTTTAATTTTAATCCTTTTTAATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCATTACTGCCACAGTTTAATTTTAATCCTTTTTAATTTTT  50

seq1  GATATCAGAGGCTCTCAAACATCTTTCGGCTTTCCCATCTGAATTACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCAGAGGCTCTCAAACATCTTTCGGCTTTCCCATCTGAATTACATG  100

seq1  AATGAGGCTACAGTTGACCTATTTTGCAGCTAAGCATAGCCTAGCTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCTACAGTTGACCTATTTTGCAGCTAAGCATAGCCTAGCTTTGA  150

seq1  AAATTTCCCTTGATTCTCTTCAATTATTATCTTCACTTTATTTGTATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCCCTTGATTCTCTTCAATTATTATCTTCACTTTATTTGTATCTT  200

seq1  AAGTAAAACACTGGTACCATTTTTCTGGTCAGGCTCTGTTCTTAATAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAACACTGGTACCATTTTTCTGGTCAGGCTCTGTTCTTAATAAAT  250

seq1  ATACAATTTTGTCTTCAAAAACACTCATTTTATGAAGTCTAAGATACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTTTGTCTTCAAAAACACTCATTTTATGAAGTCTAAGATACAGC  300

seq1  TATGAATTGATTTCTCAGGTTTAAATAGATGTCGATGGGGAGGAGCATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATTGATTTCTCAGGTTTAAATAGATGTCGATGGGGAGGAGCATAG  350

seq1  AGGACCAGGGAAACTTAGAGGAATGCCTGAGTGAGACGTGCACTTTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAGGGAAACTTAGAGGAATGCCTGAGTGAGACGTGCACTTTGTCT  400

seq1  TAAACGCCTGGACAAATCCCTAACTTTTGCCTGTGTGAATAAACCAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACGCCTGGACAAATCCCTAACTTTTGCCTGTGTGAATAAACCAATAT  450

seq1  CTCTACAAGCATTTAACATGATTTTCTATTAAATTCCATATACCATTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAAGCATTTAACATGATTTTCTATTAAATTCCATATACCATTCAC  500

seq1  AGTATCATTAATAGTGTCAGAGGCTGGCTCTCTCCCATGAGATGGTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCATTAATAGTGTCAGAGGCTGGCTCTCTCCCATGAGATGGTTTCA  550

seq1  ATTTGGGCCAGTCATTGGTTAACTGTTCCCTCAGTCTCAGCTCCATCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGCCAGTCATTGGTTAACTGTTCCCTCAGTCTCAGCTCCATCTTT  600

seq1  ATTCCTGAACAGCTTGTAGGCAGGACAGATTTTGGGTTGAAGGTTTTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGAACAGCTTGTAGGCAGGACAGATTTTGGGTTGAAGGTTTTGTG  650

seq1  GGTAGGTTAATATCCCTCTCCCTCCCCTGGAAGCCCTCCTAGCTACAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGTTAATATCCCTCTCCCTCCCCTGGAAGCCCTCCTAGCTACAGGA  700

seq1  GGTGGCCATTTCAGTCTCATACACCACTGCTAGGAGTCTTAGCTAAGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCATTTCAGTCTCATACACCACTGCTAGGAGTCTTAGCTAAGGTC  750

seq1  CCTCCACAGACTCCTAGGAGTC-TCCCCTGCCCCC  784
      |||||||||||||||||||||| ||||||||||||
seq2  CCTCCACAGACTCCTAGGAGTCTTCCCCTGCCCCC  785


seq1: chr5_7691986_7693106
seq2: B6Ng01-043L16.g_93_1200 (reverse)

seq1  TAGAGGTCAGCTGTCTCTGTGATCCTGTGATTCTGGCATCCTGGGATCCT  50
      |||||||||||  |||| | ||| ||| ||||| ||||| ||||||| ||
seq2  TAGAGGTCAGCGTTCTC-GGGAT-CTG-GATTC-GGCAT-CTGGGAT-CT  44

seq1  GAGATCATGGGTGTGTCAGAGCTCCTGGGAGTCAAGTTTTCTCTGGGAAG  100
      ||||||||||||| |||||||||||| ||||||||||||||||| |||||
seq2  GAGATCATGGGTG-GTCAGAGCTCCT-GGAGTCAAGTTTTCTCT-GGAAG  91

seq1  CTGAGATCCTGGTGTGACCAAGATCCTGGGATCCTAGGTTCCTGGGATGC  150
      |||||||||| |||||||| |||||||||||||||||| |||||||||||
seq2  CTGAGATCCT-GTGTGACC-AGATCCTGGGATCCTAGG-TCCTGGGATGC  138

seq1  TGTGGTCCTGGTTATGTTAGAGTGCCTGGGAGTGGAGCTTCTTCTGGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCCTGGTTATGTTAGAGTGCCTGGGAGTGGAGCTTCTTCTGGATG  188

seq1  TTGTGGGACTGGCTGTGGAGTTCCTGCCCAAGGTCAGCTCAGAGCACTGG  250
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TGTGGGACTGGCTGTGGAGTTCCTGCCCAAGGTCAGCTCAGAGCACTGG  237

seq1  CTCAGAACGAAAGGAACCCATGCCACTGGTTGGGTGGAGTTGCTGGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAACGAAAGGAACCCATGCCACTGGTTGGGTGGAGTTGCTGGGTGT  287

seq1  CTGGGTCCCACTGGTCCCAATTACTTCCGGTGTTAGAGTAGATGTTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCCCACTGGTCCCAATTACTTCCGGTGTTAGAGTAGATGTTGTAT  337

seq1  CCTCCTCACCGCTGATCCTATGATCCTGGGCTGGGCATGTTAGAGCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCACCGCTGATCCTATGATCCTGGGCTGGGCATGTTAGAGCATTT  387

seq1  GGGAGTGGAGCTTCCTCTGGATGTTGTGGGACTGGCATAGGAGTTTGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGGAGCTTCCTCTGGATGTTGTGGGACTGGCATAGGAGTTTGCAC  437

seq1  CCAAGATCTACTCAGGGCAATAGCCCAGACTAGAATGAACCTGTGCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATCTACTCAGGGCAATAGCCCAGACTAGAATGAACCTGTGCCTGC  487

seq1  TACTTATGTTTTTACAATATACTAAAGATATGTCTCAAGGGTAAATATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATGTTTTTACAATATACTAAAGATATGTCTCAAGGGTAAATATCT  537

seq1  AATTCCACCCAAGTTTTAATTAATTTATACTAGAAAGGAAAAGAGTCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCACCCAAGTTTTAATTAATTTATACTAGAAAGGAAAAGAGTCATT  587

seq1  TCTGAATTCTTGTACACTAAAAATTTCCTGTGCACATTCAGAATAAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTCTTGTACACTAAAAATTTCCTGTGCACATTCAGAATAAACAT  637

seq1  AATATTTCTGATAATATATGAAAGATTTTATAATTTGCCTTTAAAATTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCTGATAATATATGAAAGATTTTATAATTTGCCTTTAAAATTCT  687

seq1  CTTGAAATGTCACACACAGATTTAATTTTTAAATGTATTTTAATTAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAATGTCACACACAGATTTAATTTTTAAATGTATTTTAATTAAGGG  737

seq1  ATTAAAAATTATTTCTCAAAATTTTCTGAGTGATCAATAATTTATAATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATTATTTCTCAAAATTTTCTGAGTGATCAATAATTTATAATTC  787

seq1  TCAGTAAGACCTGGCTGAAATATGACTTCATCCTAAGAAAAATGCTCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAGACCTGGCTGAAATATGACTTCATCCTAAGAAAAATGCTCTGG  837

seq1  TGATATTAAAGATTATTGTGACCTTAAACATAAGAAAAATGCAGCTAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTAAAGATTATTGTGACCTTAAACATAAGAAAAATGCAGCTAACA  887

seq1  ATTTAGTTAAGAATGTGACCATTTTCATGGTTAACATTTTTATCATCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTTAAGAATGTGACCATTTTCATGGTTAACATTTTTATCATCACA  937

seq1  GCTCGGCTTTTACATGATCTTACATATTTGTTCTGATAACCATACATTAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGGCTTTTACATGATCTTACATATTTGTTCTGATAACCATACATTAG  987

seq1  AGCATGAAGATACTGAAATCTTACATAGTTGTTCTGGTAACCATACATTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAAGATACTGAAATCTTACATAGTTGTTCTGGTAACCATACATTA  1037

seq1  GTGCATGGAGATACTGAGATAACAATTAGTGAGATAAAGACAATTTTTCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGGAGATACTGAGATAACAATTAGTGAGATAAAGACAATTTTTCT  1087

seq1  CTTTAACAGGATAACAAATAT  1121
      |||||||||||||||||||||
seq2  CTTTAACAGGATAACAAATAT  1108


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